Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 6.0e-120 434.1 208 100.0
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 1.1e-84 317.0 185 78.9
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 1.6e-83 313.2 180 81.1
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 8.5e-82 307.4 182 80.2
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 8.5e-82 307.4 177 81.4
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 1.5e-81 306.6 177 78.5
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 1.5e-81 306.6 185 77.3
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 3.2e-81 305.4 183 78.7
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 5.5e-81 304.7 181 75.1
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 1.6e-80 303.1 207 71.0
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 6.1e-80 301.2 185 76.2
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 1.4e-79 300.1 183 77.6
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 2.3e-79 299.3 171 80.7
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 3.0e-79 298.9 189 77.2
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 4.0e-79 298.5 176 79.0
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 5.2e-79 298.1 185 76.8
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.2e-78 297.0 185 74.6
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 2.0e-78 296.2 175 76.6
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 2.6e-78 295.8 183 77.0
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 4.4e-78 295.0 188 77.7
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 1.3e-77 293.5 168 78.6
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 1.7e-77 293.1 185 76.2
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 2.8e-77 292.4 188 75.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 4.8e-77 291.6 167 79.0
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 1.8e-76 289.7 186 69.9
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 1.8e-76 289.7 185 73.5
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 2.4e-76 289.3 175 74.3
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 3.1e-76 288.9 180 72.8
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 3.1e-76 288.9 180 72.8
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 5.3e-76 288.1 177 72.9
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 9.1e-76 287.3 179 73.7
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 3.5e-75 285.4 186 72.6
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 3.5e-75 285.4 185 69.7
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 4.5e-75 285.0 173 69.9
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 4.5e-75 285.0 153 83.0
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 1.7e-74 283.1 157 79.0
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.7e-74 283.1 173 72.8
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 1.7e-74 283.1 172 76.2
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 2.9e-74 282.3 180 73.9
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 3.8e-74 282.0 182 71.4
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 5.0e-74 281.6 173 71.7
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 5.0e-74 281.6 181 72.9
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 6.5e-74 281.2 175 70.9
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 6.5e-74 281.2 175 70.9
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 8.5e-74 280.8 171 74.3
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 1.1e-73 280.4 173 74.6
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 1.1e-73 280.4 185 69.2
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 4.2e-73 278.5 179 70.4
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 4.2e-73 278.5 175 74.3
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 4.2e-73 278.5 178 70.2
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 5.5e-73 278.1 182 72.0
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 5.5e-73 278.1 168 73.2
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 7.2e-73 277.7 184 69.6
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 7.2e-73 277.7 184 73.4
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 9.4e-73 277.3 181 71.8
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 1.2e-72 276.9 180 73.3
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.2e-72 276.9 185 68.1
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 1.6e-72 276.6 185 69.2
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 1.6e-72 276.6 192 68.2
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 2.1e-72 276.2 182 72.5
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 6.1e-72 274.6 188 69.7
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 8.0e-72 274.2 185 69.2
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 1.4e-71 273.5 178 70.2
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 3.0e-71 272.3 185 69.7
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 8.8e-71 270.8 190 66.8
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 1.5e-70 270.0 153 77.1
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 4.4e-70 268.5 154 75.3
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 5.7e-70 268.1 175 70.3
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 1.3e-69 266.9 172 69.8
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 8.3e-69 264.2 157 77.7
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 4.1e-68 261.9 177 69.5
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 7.0e-68 261.2 183 67.2
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 1.3e-66 256.9 180 67.8
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 1.3e-66 256.9 180 67.8
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 1.7e-66 256.5 176 68.2
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 2.3e-66 256.1 176 67.6
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 2.9e-66 255.8 184 63.6
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.9e-66 255.8 182 63.7
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 6.6e-66 254.6 180 68.3
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 8.6e-66 254.2 192 60.4
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 3.3e-65 252.3 151 82.1
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 3.3e-65 252.3 149 79.9
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 5.5e-65 251.5 181 65.2
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 7.2e-65 251.1 184 65.8
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 9.5e-65 250.8 180 65.6
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 9.5e-65 250.8 180 65.6
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 9.5e-65 250.8 180 65.6
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 9.5e-65 250.8 158 70.9
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 1.2e-64 250.4 185 65.4
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 1.2e-64 250.4 133 82.0
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 2.1e-64 249.6 185 65.4
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 2.1e-64 249.6 220 57.3
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 2.1e-64 249.6 183 64.5
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 2.8e-64 249.2 184 64.7
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 2.8e-64 249.2 180 65.6
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 3.6e-64 248.8 184 64.7
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 1.2e-62 243.8 147 72.1
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 1.5e-62 243.4 153 79.7
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 1.5e-62 243.4 179 64.2
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 2.0e-62 243.0 159 66.7
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 7.5e-62 241.1 154 69.5
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 1.4e-60 236.9 157 71.3
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 2.4e-60 236.1 185 62.2
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 3.1e-60 235.7 149 75.2
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 4.1e-60 235.3 253 49.0
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 9.2e-60 234.2 151 70.2
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 4.7e-56 221.9 139 72.7
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 5.2e-55 218.4 133 80.5
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.2e-54 217.2 177 55.9
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 1.5e-54 216.9 231 51.1
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 6.6e-50 201.4 146 64.4
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 7.3e-49 198.0 132 72.0
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 2.1e-48 196.4 153 59.5
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 3.1e-47 192.6 171 52.6
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.5e-46 190.3 148 58.8
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 2.9e-45 186.0 130 69.2
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.7e-43 179.5 106 74.5
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 6.0e-43 178.3 105 75.2
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 3.0e-42 176.0 161 52.8
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 3.9e-42 175.6 138 62.3
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 6.6e-42 174.9 111 74.8
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 3.3e-41 172.6 130 60.0
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 4.3e-41 172.2 128 62.5
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.8e-40 169.5 114 76.3
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.9e-36 156.8 91 78.0
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 7.1e-36 154.8 127 61.4
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 3.5e-35 152.5 117 59.0
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 7.3e-33 144.8 164 46.3
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 9.5e-33 144.4 220 37.3
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 5.4e-28 128.6 86 64.0
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 2.3e-26 123.2 79 63.3
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 1.4e-23 114.0 99 60.6
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.4e-23 113.2 181 39.8
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 3.2e-20 102.8 77 58.4
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 2.4e-15 86.7 179 31.3
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 1.2e-11 74.3 43 79.1


User provided reference genes

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