Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 2.4e-119 432.2 216 100.0
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.3e-88 330.1 233 74.2
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.6e-83 313.2 220 73.2
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 6.1e-83 311.2 218 71.6
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 1.0e-82 310.5 220 73.6
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.5e-81 306.6 221 71.5
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 9.8e-81 303.9 219 71.2
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 8.3e-80 300.8 218 72.0
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 2.4e-79 299.3 224 71.0
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 5.4e-79 298.1 227 68.3
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 5.4e-79 298.1 223 71.3
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 7.0e-79 297.7 217 71.4
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.6e-78 296.6 224 69.2
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 2.7e-78 295.8 220 70.5
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 3.5e-78 295.4 225 71.1
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 3.5e-78 295.4 231 69.3
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 7.7e-78 294.3 220 70.0
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 2.3e-77 292.7 219 71.7
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 6.6e-77 291.2 229 69.4
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 8.6e-77 290.8 234 68.4
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.5e-76 290.0 236 67.4
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.9e-76 289.7 229 69.0
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 2.5e-76 289.3 218 70.2
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 4.3e-76 288.5 236 66.9
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.6e-75 286.6 222 67.6
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 2.1e-75 286.2 222 68.5
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 3.6e-75 285.4 220 68.6
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 3.6e-75 285.4 216 71.3
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.3e-74 282.7 226 66.4
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 3.0e-74 282.3 222 68.0
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 1.5e-73 280.0 183 76.0
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 2.0e-73 279.6 183 76.0
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 2.0e-73 279.6 233 64.8
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 2.6e-73 279.3 191 72.8
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 9.8e-73 277.3 184 73.4
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.3e-72 276.9 190 72.6
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.7e-72 276.6 226 65.9
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 2.2e-72 276.2 193 72.0
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 2.2e-72 276.2 174 78.2
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.9e-72 275.8 201 71.6
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 2.9e-72 275.8 224 66.1
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 2.9e-72 275.8 223 67.3
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 1.1e-71 273.9 179 74.3
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 3.2e-71 272.3 219 70.3
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 7.0e-71 271.2 248 58.5
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 9.2e-71 270.8 236 62.3
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.2e-70 270.4 224 65.2
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.2e-70 270.4 216 67.6
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.2e-70 270.4 226 65.0
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 1.6e-70 270.0 227 64.3
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.7e-70 269.2 165 78.8
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 5.9e-70 268.1 226 63.7
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 1.7e-69 266.5 221 63.3
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.0e-69 265.8 222 64.0
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 3.9e-69 265.4 179 75.4
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 3.9e-69 265.4 195 70.8
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 5.0e-69 265.0 222 64.4
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 5.0e-69 265.0 179 72.6
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 8.6e-69 264.2 209 67.0
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 8.6e-69 264.2 196 70.4
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 8.6e-69 264.2 199 69.8
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.1e-68 263.8 179 75.4
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.9e-68 263.1 187 68.4
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 2.5e-68 262.7 192 70.3
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 2.5e-68 262.7 228 65.4
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 2.5e-68 262.7 198 69.7
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 5.6e-68 261.5 150 82.0
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 9.5e-68 260.8 187 67.9
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.2e-67 260.4 192 71.9
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 4.7e-67 258.5 149 83.2
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 8.0e-67 257.7 151 80.8
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 8.0e-67 257.7 201 68.7
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.3e-66 256.1 155 79.4
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 2.3e-66 256.1 225 64.4
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 5.2e-66 255.0 148 81.1
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.5e-65 253.4 242 59.1
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 5.8e-65 251.5 200 64.5
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 2.2e-64 249.6 144 81.2
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 8.3e-64 247.7 170 72.4
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 8.3e-64 247.7 170 72.4
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.1e-63 247.3 166 72.3
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.1e-63 247.3 166 72.3
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 7.0e-63 244.6 187 69.0
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.6e-62 243.4 134 85.1
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 2.7e-62 242.7 133 87.2
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.0e-62 241.5 210 62.9
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.0e-61 240.7 166 68.1
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 3.3e-60 235.7 176 70.5
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 5.6e-60 235.0 158 72.8
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 5.6e-60 235.0 192 63.5
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 7.3e-60 234.6 205 60.0
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.8e-59 232.6 129 85.3
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 6.2e-59 231.5 176 64.2
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 3.7e-56 222.2 166 64.5
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 3.6e-51 205.7 202 53.0
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 4.1e-47 192.2 209 54.5
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.7e-46 189.5 98 86.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 5.6e-44 181.8 90 91.1
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 9.6e-44 181.0 182 56.0
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.2e-41 174.1 130 61.5
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 7.6e-41 171.4 156 51.3
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 3.8e-40 169.1 164 61.6
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 1.6e-35 153.7 252 42.9
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.4e-34 150.6 138 55.8
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 2.4e-34 149.8 100 74.0
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 5.3e-34 148.7 75 86.7
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 1.7e-32 143.7 156 53.2
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 2.2e-32 143.3 149 55.7
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 4.9e-32 142.1 110 67.3
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 2.1e-30 136.7 78 88.5
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 6.0e-30 135.2 72 88.9
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 4.0e-26 122.5 68 80.9
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.7e-22 109.8 56 87.5


User provided reference genes

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