Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 2.2e-86 322.4 175 100.0
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.5e-31 140.2 119 70.6
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 3.7e-30 135.6 113 68.1
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 3.2e-29 132.5 128 60.9
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 9.2e-29 131.0 120 63.3
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 2.7e-28 129.4 123 61.8
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 3.9e-27 125.6 122 59.8
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 8.6e-27 124.4 127 61.4
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.2e-25 120.6 125 61.6
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 2.1e-25 119.8 144 54.2
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 2.1e-25 119.8 129 57.4
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 4.7e-25 118.6 126 57.9
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 1.1e-24 117.5 126 58.7
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 1.4e-24 117.1 117 59.8
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.5e-23 113.6 144 54.9
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 4.4e-23 112.1 121 57.9
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 7.5e-23 111.3 115 59.1
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.3e-22 110.5 111 59.5
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.7e-22 110.2 120 59.2
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 2.9e-22 109.4 143 49.0
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 3.7e-22 109.0 121 54.5
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 4.9e-22 108.6 124 60.5
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 4.9e-22 108.6 141 48.9
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 6.4e-22 108.2 140 55.7
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 1.9e-21 106.7 117 64.1
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 1.9e-21 106.7 121 53.7
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 2.4e-21 106.3 116 57.8
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 3.2e-21 105.9 145 46.9
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 4.1e-21 105.5 133 51.9
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 4.1e-21 105.5 144 50.0
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 4.1e-21 105.5 116 57.8
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 5.4e-21 105.1 121 53.7
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 7.1e-21 104.8 146 46.6
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 9.2e-21 104.4 124 54.0
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 9.2e-21 104.4 129 55.0
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 1.2e-20 104.0 127 51.2
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 1.2e-20 104.0 147 47.6
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 2.1e-20 103.2 116 55.2
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 2.1e-20 103.2 124 50.8
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 2.7e-20 102.8 112 54.5
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 3.5e-20 102.4 143 45.5
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 3.5e-20 102.4 184 42.9
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 4.6e-20 102.1 128 52.3
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 4.6e-20 102.1 145 46.9
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 6.0e-20 101.7 107 57.0
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.0e-19 100.9 121 53.7
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 1.7e-19 100.1 165 43.0
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 1.7e-19 100.1 174 44.3
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 3.0e-19 99.4 117 56.4
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 3.9e-19 99.0 185 42.2
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 3.9e-19 99.0 190 39.5
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 5.1e-19 98.6 147 42.9
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 5.1e-19 98.6 144 47.9
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 6.6e-19 98.2 124 58.9
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 6.6e-19 98.2 122 50.0
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 8.6e-19 97.8 115 53.9
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 8.6e-19 97.8 118 52.5
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.1e-18 97.4 111 59.5
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 2.5e-18 96.3 143 44.8
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 2.5e-18 96.3 122 51.6
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 2.5e-18 96.3 141 48.9
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 7.3e-18 94.7 143 42.0
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 7.3e-18 94.7 162 42.6
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 7.3e-18 94.7 144 44.4
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 7.3e-18 94.7 136 48.5
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 1.6e-17 93.6 120 50.8
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 1.6e-17 93.6 183 38.3
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.8e-17 92.8 123 50.4
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 2.8e-17 92.8 112 52.7
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.8e-17 92.8 123 50.4
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 3.6e-17 92.4 121 47.1
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 3.6e-17 92.4 123 50.4
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.6e-17 92.4 123 50.4
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.6e-17 92.4 123 49.6
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 4.7e-17 92.0 121 47.1
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.1e-16 90.9 159 42.8
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 1.4e-16 90.5 121 48.8
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.8e-16 90.1 123 48.8
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.8e-16 90.1 124 50.0
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 3.1e-16 89.4 109 51.4
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 3.1e-16 89.4 143 45.5
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 4.0e-16 89.0 123 52.8
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 6.8e-16 88.2 151 42.4
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 1.5e-15 87.0 145 44.1
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.5e-15 87.0 121 52.9
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 2.6e-15 86.3 110 50.9
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 2.6e-15 86.3 110 50.9
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.6e-15 86.3 132 44.7
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 4.4e-15 85.5 147 42.9
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 7.6e-15 84.7 71 66.2
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 1.3e-14 84.0 129 45.7
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.9e-14 82.8 123 51.2
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 8.4e-14 81.3 64 68.8
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.4e-13 80.5 122 44.3
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 3.2e-13 79.3 106 53.8
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 1.2e-12 77.4 110 48.2
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.2e-12 77.4 108 49.1
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 2.7e-12 76.3 97 49.5
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.5e-12 75.9 108 48.1
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 7.8e-12 74.7 115 52.2
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 1.3e-11 73.9 151 41.7
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 3.9e-11 72.4 46 78.3
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 3.9e-11 72.4 122 41.8
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 3.3e-10 69.3 59 66.1
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 1.8e-08 63.5 148 36.5
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 5.2e-08 62.0 53 66.0
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 6.8e-08 61.6 140 35.7
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 1.2e-07 60.8 109 40.4
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 9.9e-07 57.8 107 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 2.2e-06 56.6 62 51.6
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 4.9e-06 55.5 42 69.0
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 4.9e-06 55.5 42 69.0
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 8.4e-06 54.7 99 41.4


User provided reference genes

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