Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 8.7e-62 240.0 108 100.0
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 6.5e-17 90.9 52 73.1
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 4.2e-16 88.2 56 67.9
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.2e-15 86.7 56 69.6
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 8.0e-15 84.0 56 69.6
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 8.0e-15 84.0 56 64.3
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 2.3e-14 82.4 64 59.4
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 3.9e-14 81.6 56 66.1
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 3.9e-14 81.6 56 67.9
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 3.9e-14 81.6 64 56.2
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 3.9e-14 81.6 64 56.2
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 3.9e-14 81.6 56 62.5
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 5.2e-14 81.3 56 67.9
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 6.7e-14 80.9 56 64.3
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 2.0e-13 79.3 56 62.5
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 2.0e-13 79.3 56 62.5
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 2.6e-13 79.0 64 57.8
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 2.6e-13 79.0 56 62.5
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.3e-13 78.6 64 57.8
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 3.3e-13 78.6 56 62.5
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 5.7e-13 77.8 52 61.5
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 7.4e-13 77.4 56 62.5
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 9.7e-13 77.0 64 54.7
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 1.3e-12 76.6 56 60.7
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 2.2e-12 75.9 56 60.7
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 2.2e-12 75.9 64 53.1
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 2.2e-12 75.9 64 53.1
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 4.8e-12 74.7 64 54.7
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 4.8e-12 74.7 64 54.7
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 4.8e-12 74.7 56 58.9
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 6.3e-12 74.3 64 56.2
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 8.2e-12 73.9 64 53.1
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.1e-11 73.6 56 58.9
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.1e-11 73.6 56 58.9
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.4e-11 73.2 56 58.9
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 1.8e-11 72.8 64 53.1
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.8e-11 72.8 64 54.7
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 1.8e-11 72.8 56 57.1
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 2.4e-11 72.4 56 57.1
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 2.4e-11 72.4 56 57.1
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 2.4e-11 72.4 56 55.4
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 2.4e-11 72.4 56 57.1
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 3.1e-11 72.0 56 60.7
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 3.1e-11 72.0 56 60.7
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 3.1e-11 72.0 56 57.1
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 3.1e-11 72.0 56 58.9
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 4.1e-11 71.6 64 54.7
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 4.1e-11 71.6 56 55.4
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 4.1e-11 71.6 56 57.1
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 4.1e-11 71.6 61 52.5
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 5.3e-11 71.2 64 53.1
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 5.3e-11 71.2 64 54.7
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 5.3e-11 71.2 64 51.6
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 5.3e-11 71.2 56 58.9
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 9.1e-11 70.5 56 55.4
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 9.1e-11 70.5 56 58.9
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 1.2e-10 70.1 64 50.0
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.2e-10 70.1 56 57.1
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 1.2e-10 70.1 56 58.9
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 1.6e-10 69.7 64 51.6
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 1.6e-10 69.7 64 53.1
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 2.0e-10 69.3 64 51.6
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 2.6e-10 68.9 49 59.2
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 3.5e-10 68.6 64 46.9
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 4.5e-10 68.2 49 63.3
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 4.5e-10 68.2 56 50.0
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 4.5e-10 68.2 56 50.0
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 5.9e-10 67.8 64 50.0
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 7.7e-10 67.4 56 50.0
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 7.7e-10 67.4 56 51.8
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 7.7e-10 67.4 42 69.0
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.0e-09 67.0 42 71.4
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 1.3e-09 66.6 43 67.4
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 1.3e-09 66.6 56 57.1
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 1.3e-09 66.6 43 65.1
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 1.3e-09 66.6 43 65.1
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 1.3e-09 66.6 64 51.6
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.3e-09 66.6 49 57.1
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.3e-09 66.6 49 55.1
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 1.3e-09 66.6 64 48.4
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 1.7e-09 66.2 56 58.9
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.7e-09 66.2 49 55.1
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.7e-09 66.2 49 55.1
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.7e-09 66.2 49 55.1
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.7e-09 66.2 49 55.1
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 1.7e-09 66.2 64 43.8
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 2.9e-09 65.5 42 66.7
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 3.8e-09 65.1 49 59.2
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 5.0e-09 64.7 49 59.2
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 6.5e-09 64.3 49 59.2
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 6.5e-09 64.3 64 48.4
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 6.5e-09 64.3 64 48.4
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 8.5e-09 63.9 64 48.4
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 8.5e-09 63.9 64 48.4
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 1.9e-08 62.8 56 50.0
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.5e-08 62.4 49 53.1
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 3.2e-08 62.0 49 55.1
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 3.2e-08 62.0 64 46.9
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 3.2e-08 62.0 64 46.9
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 3.2e-08 62.0 64 46.9
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 3.2e-08 62.0 64 46.9
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 3.2e-08 62.0 64 46.9
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 7.2e-08 60.8 49 53.1
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.4e-08 60.5 49 53.1
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.4e-08 60.5 49 53.1
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.4e-08 60.5 49 53.1
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.4e-08 60.5 49 53.1
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.4e-08 60.5 49 53.1
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.2e-07 60.1 64 46.9
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 1.6e-07 59.7 64 43.8
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 2.1e-07 59.3 64 46.9
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 2.1e-07 59.3 64 43.8
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 2.7e-07 58.9 49 53.1
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 2.7e-07 58.9 64 45.3
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 6.1e-07 57.8 64 42.2
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.0e-06 57.0 53 47.2
Zm00001eb233510 Zea mays HOM05D004945 ORTHO05D005536 1.4e-06 56.6 52 46.2
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 3.0e-06 55.5 64 43.8
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 3.0e-06 55.5 64 45.3
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 3.0e-06 55.5 64 45.3
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 3.0e-06 55.5 64 45.3
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 3.0e-06 55.5 64 45.3
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 4.0e-06 55.1 64 42.2
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 5.2e-06 54.7 64 42.2
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 6.7e-06 54.3 63 42.9
Peaxi162Scf00038g02542 Petunia axillaris HOM05D004945 ORTHO05D005536 6.7e-06 54.3 56 42.9


User provided reference genes

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