Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010815001 Vitis vinifera HOM05D007193 ORTHO05D008972 2.7e-82 308.5 149 100.0
GSVIVG01030223001 Vitis vinifera HOM05D007193 ORTHO05D008972 1.5e-67 259.6 132 97.0
Haze_21127 Corylus avellana HOM05D007193 ORTHO05D008972 1.0e-44 183.7 132 68.9
Cfa017069 Carpinus fangiana HOM05D007193 ORTHO05D008972 3.0e-44 182.2 132 68.9
Dinv11397 Davidia involucrata HOM05D007193 ORTHO05D008972 8.6e-44 180.6 143 62.9
Hma1.2p1_0174F.1_g077020 Hydrangea macrophylla HOM05D007193 ORTHO05D008972 8.6e-44 180.6 132 65.9
CiPaw.09G217600 Carya illinoinensis HOM05D007193 ORTHO05D008972 1.6e-42 176.4 132 65.9
Duzib151G0002 Durio zibethinus HOM05D007193 ORTHO05D008972 3.6e-42 175.3 132 64.4
TAR633G0507 Trochodendron aralioides HOM05D007193 ORTHO05D008972 2.3e-41 172.6 132 65.2
Duzib212G0445 Durio zibethinus HOM05D007193 ORTHO05D008972 4.0e-41 171.8 126 64.3
Nn2g11074 Nelumbo nucifera HOM05D007193 ORTHO05D008972 4.0e-41 171.8 126 63.5
QL07p033223 Quercus lobata HOM05D007193 ORTHO05D008972 5.2e-41 171.4 132 64.4
Cc02_g36290 Coffea canephora HOM05D007193 ORTHO05D008972 7.5e-40 167.5 120 63.3
VMungo1383G2109 Vigna mungo HOM05D007193 ORTHO05D008972 9.9e-40 167.2 138 60.1
Atru.chr8.2367 Acer truncatum HOM05D007193 ORTHO05D008972 1.7e-39 166.4 128 62.5
FAN05G1003 Fragaria x ananassa HOM05D007193 ORTHO05D008972 1.7e-39 166.4 131 61.8
RcHm_v2.0_Chr3g0461371 Rosa chinensis HOM05D007193 ORTHO05D008972 1.7e-39 166.4 129 61.2
FAN02G2621 Fragaria x ananassa HOM05D007193 ORTHO05D008972 2.2e-39 166.0 130 60.8
FAN09G4509 Fragaria x ananassa HOM05D007193 ORTHO05D008972 2.9e-39 165.6 131 61.8
Rhsim04G0123100 Rhododendron simsii HOM05D007193 ORTHO05D008972 3.7e-39 165.2 143 56.6
FvH4_6g10470 Fragaria vesca HOM05D007193 ORTHO05D008972 4.9e-39 164.9 130 60.8
Prupe.6G289100 Prunus persica HOM05D007193 ORTHO05D008972 6.4e-39 164.5 138 57.2
Glyma.09G278200 Glycine max HOM05D007193 ORTHO05D008972 8.3e-39 164.1 107 70.1
Glyma.18G210600 Glycine max HOM05D007193 ORTHO05D008972 1.1e-38 163.7 107 70.1
Lj2A63T42 Lonicera japonica HOM05D007193 ORTHO05D008972 1.1e-38 163.7 132 62.1
Lalb_Chr01g0023631 Lupinus albus HOM05D007193 ORTHO05D008972 1.1e-38 163.7 133 60.9
vmacro08932 Vaccinium macrocarpon HOM05D007193 ORTHO05D008972 1.1e-38 163.7 143 56.6
Ciclev10011631m.g Citrus clementina HOM05D007193 ORTHO05D008972 1.9e-38 162.9 132 58.3
FAN14G4175 Fragaria x ananassa HOM05D007193 ORTHO05D008972 3.2e-38 162.2 131 60.3
COL.COLO4_36102 Corchorus olitorius HOM05D007193 ORTHO05D008972 4.1e-38 161.8 129 61.2
Gohir.D02G005700 Gossypium hirsutum HOM05D007193 ORTHO05D008972 4.1e-38 161.8 142 57.7
Gorai.005G006400 Gossypium raimondii HOM05D007193 ORTHO05D008972 4.1e-38 161.8 142 57.7
CSS0011076 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 1.2e-37 160.2 143 54.5
Phvul.008G087300 Phaseolus vulgaris HOM05D007193 ORTHO05D008972 1.2e-37 160.2 106 68.9
Prupe.4G286300 Prunus persica HOM05D007193 ORTHO05D008972 4.6e-37 158.3 138 55.8
Cpa.g.sc33.101 Carica papaya HOM05D007193 ORTHO05D008972 1.3e-36 156.8 140 58.6
Sc02g0000770 Simmondsia chinensis HOM05D007193 ORTHO05D008972 1.3e-36 156.8 132 59.1
MD04G1170300 Malus domestica HOM05D007193 ORTHO05D008972 2.3e-36 156.0 132 56.8
TWI53G1230 Tripterygium wilfordii HOM05D007193 ORTHO05D008972 3.9e-36 155.2 93 75.3
Nitab4.5_0000454g0040 Nicotiana tabacum HOM05D007193 ORTHO05D008972 1.1e-35 153.7 133 58.6
Nitab4.5_0012389g0010 Nicotiana tabacum HOM05D007193 ORTHO05D008972 1.1e-35 153.7 133 57.9
Oeu057644.3 Olea europaea HOM05D007193 ORTHO05D008972 9.5e-35 150.6 126 56.3
PGR031G3803 Punica granatum HOM05D007193 ORTHO05D008972 1.2e-34 150.2 131 58.8
Peaxi162Scf00732g00443 Petunia axillaris HOM05D007193 ORTHO05D008972 2.1e-34 149.4 133 57.1
EL10Ac7g17043 Beta vulgaris HOM05D007193 ORTHO05D008972 2.8e-34 149.1 134 53.0
Sabra04G0150400 Salix brachista HOM05D007193 ORTHO05D008972 3.6e-34 148.7 111 62.2
THA.LOC104806626 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 8.1e-34 147.5 131 52.7
Potri.016G132500 Populus trichocarpa HOM05D007193 ORTHO05D008972 1.4e-33 146.7 133 57.1
Hund03753 Selenicereus undatus HOM05D007193 ORTHO05D008972 1.4e-33 146.7 129 57.4
MELO3C009116.2 Cucumis melo HOM05D007193 ORTHO05D008972 2.4e-33 146.0 137 57.7
Gohir.D09G213500 Gossypium hirsutum HOM05D007193 ORTHO05D008972 2.4e-33 146.0 133 58.6
Gorai.006G233700 Gossypium raimondii HOM05D007193 ORTHO05D008972 2.4e-33 146.0 133 58.6
Gohir.A09G213630 Gossypium hirsutum HOM05D007193 ORTHO05D008972 3.1e-33 145.6 133 58.6
ClCG10G022600 Citrullus lanatus HOM05D007193 ORTHO05D008972 6.8e-33 144.4 128 57.8
Lj1g0001931 Lotus japonicus HOM05D007193 ORTHO05D008972 1.2e-32 143.7 133 54.1
arahy.Tifrunner.gnm1.ann1.N3F1SH Arachis hypogaea HOM05D007193 ORTHO05D008972 1.5e-32 143.3 133 53.4
CsaV3_3G033230 Cucumis sativus L. HOM05D007193 ORTHO05D008972 1.5e-32 143.3 136 55.1
Ah.08g209780 Amaranthus hybridus HOM05D007193 ORTHO05D008972 2.6e-32 142.5 122 54.9
CAN.G940.17 Capsicum annuum HOM05D007193 ORTHO05D008972 2.6e-32 142.5 133 56.4
arahy.Tifrunner.gnm1.ann1.Y4LGN2 Arachis hypogaea HOM05D007193 ORTHO05D008972 5.8e-32 141.4 133 53.4
Eucgr.A00654 Eucalyptus grandis HOM05D007193 ORTHO05D008972 7.6e-32 141.0 129 55.0
PGSC0003DMG400017034 Solanum tuberosum HOM05D007193 ORTHO05D008972 1.7e-31 139.8 129 55.0
CAN.G475.6 Capsicum annuum HOM05D007193 ORTHO05D008972 2.9e-31 139.0 127 55.1
Sed0019502 Sechium edule HOM05D007193 ORTHO05D008972 8.4e-31 137.5 118 55.9
MD12G1184300 Malus domestica HOM05D007193 ORTHO05D008972 4.1e-30 135.2 133 52.6
CSS0034035 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 9.2e-30 134.0 143 49.7
Medtr7g072460 Medicago truncatula HOM05D007193 ORTHO05D008972 1.2e-29 133.7 128 50.8
Psat3g122120 Pisum sativum HOM05D007193 ORTHO05D008972 1.2e-29 133.7 134 49.3
BcaC06g33345 Brassica carinata HOM05D007193 ORTHO05D008972 1.6e-29 133.3 137 46.7
PSO017G7058 Papaver somniferum HOM05D007193 ORTHO05D008972 1.6e-29 133.3 115 53.9
SGA_v2.0_scaffold85G26656 Striga asiatica HOM05D007193 ORTHO05D008972 1.6e-29 133.3 141 51.1
TPR.G30994 Trifolium pratense HOM05D007193 ORTHO05D008972 1.6e-29 133.3 133 50.4
Aqoxy4G02155 Aquilegia oxysepala HOM05D007193 ORTHO05D008972 2.1e-29 132.9 126 49.2
C07p46550 Brassica napus HOM05D007193 ORTHO05D008972 2.7e-29 132.5 137 46.7
CARHR161320 Cardamine hirsuta HOM05D007193 ORTHO05D008972 3.5e-29 132.1 138 48.6
AL5G32160 Arabidopsis lyrata HOM05D007193 ORTHO05D008972 4.6e-29 131.7 138 45.7
Sp5g10570 Schrenkiella parvula HOM05D007193 ORTHO05D008972 7.8e-29 131.0 137 46.7
AUR62006334 Chenopodium quinoa HOM05D007193 ORTHO05D008972 1.0e-28 130.6 100 61.0
Aa31sc223G10 Aethionema arabicum HOM05D007193 ORTHO05D008972 1.7e-28 129.8 134 47.0
A03p48460 Brassica napus HOM05D007193 ORTHO05D008972 1.7e-28 129.8 137 45.3
BraA03t13951Z Brassica rapa HOM05D007193 ORTHO05D008972 1.7e-28 129.8 137 45.3
AT3G51710 Arabidopsis thaliana HOM05D007193 ORTHO05D008972 2.3e-28 129.4 138 44.9
Carub.0005s1805 Capsella rubella HOM05D007193 ORTHO05D008972 3.9e-28 128.6 139 45.3
MBI14_g13641_MAGBIO Magnolia biondii HOM05D007193 ORTHO05D008972 1.1e-27 127.1 131 45.0
Lsat_1_v5_gn_9_38080 Lactuca sativa HOM05D007193 ORTHO05D008972 1.5e-27 126.7 129 48.1
Migut.J00070 Erythranthe guttata HOM05D007193 ORTHO05D008972 1.9e-27 126.3 150 46.7
PSO170G5268 Papaver somniferum HOM05D007193 ORTHO05D008972 1.9e-27 126.3 142 46.5
Ca_07743_v3 Cicer arietinum L. HOM05D007193 ORTHO05D008972 9.6e-27 124.0 82 62.2
BcaC06g33003 Brassica carinata HOM05D007193 ORTHO05D008972 1.2e-26 123.6 137 43.8
HanXRQChr10g0286401 Helianthus annuus HOM05D007193 ORTHO05D008972 3.1e-25 119.0 130 46.9
Thhalv10010348m.g Eutrema salsugineum HOM05D007193 ORTHO05D008972 9.0e-25 117.5 137 42.3
Thecc.04G156300 Theobroma cacao HOM05D007193 ORTHO05D008972 2.6e-24 115.9 132 50.0
Solyc09g018490.4 Solanum lycopersicum HOM05D007193 ORTHO05D008972 9.3e-22 107.5 80 61.2
Sopen09g011740 Solanum pennellii HOM05D007193 ORTHO05D008972 9.3e-22 107.5 80 61.2
ATR0681G083 Amborella trichopoda HOM05D007193 ORTHO05D008972 3.5e-21 105.5 129 39.5
Zm00001eb368690 Zea mays HOM05D007193 ORTHO05D008972 9.9e-16 87.4 135 42.2
THA.LOC104806964 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 3.2e-14 82.4 54 64.8
Actinidia32557 Actinidia chinensis HOM05D007193 ORTHO05D008972 1.2e-13 80.5 56 64.3
AUR62026371 Chenopodium quinoa HOM05D007193 ORTHO05D008972 6.0e-13 78.2 112 41.1
DCAR_028906 Daucus carota HOM05D007193 ORTHO05D008972 9.6e-11 70.9 93 43.0
CANSAT35G0173 Cannabis sativa HOM05D007193 ORTHO05D008972 1.4e-09 67.0 136 35.3
Manes.08G172801 Manihot esculenta HOM05D007193 ORTHO05D008972 1.5e-08 63.5 124 39.5


User provided reference genes

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