Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 3.2e-184 648.3 330 100.0
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 1.5e-112 410.2 297 72.1
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 2.1e-111 406.4 294 72.4
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 1.4e-110 403.7 285 73.3
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 5.3e-110 401.7 297 68.7
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 5.4e-107 391.7 287 69.7
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 5.6e-104 381.7 297 68.7
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 9.6e-104 380.9 294 68.0
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.3e-103 380.6 296 67.9
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 6.2e-103 378.3 296 66.2
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 9.0e-102 374.4 297 65.0
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 2.6e-101 372.9 353 57.2
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 5.8e-101 371.7 292 66.4
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 2.2e-100 369.8 297 64.3
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 2.9e-100 369.4 298 62.8
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.9e-99 366.7 293 65.2
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.9e-99 366.7 321 59.8
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 2.5e-99 366.3 297 64.3
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.2e-98 364.0 297 64.0
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 2.7e-98 362.8 287 63.8
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 6.0e-98 361.7 297 62.6
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.8e-97 360.1 300 63.0
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.1e-97 358.6 297 62.3
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 6.7e-97 358.2 297 63.3
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 6.7e-97 358.2 297 63.0
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 9.6e-96 354.4 296 62.5
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 2.1e-95 353.2 296 60.8
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 2.4e-94 349.7 292 61.3
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.4e-94 349.7 292 61.3
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 4.0e-94 349.0 292 60.6
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 5.3e-94 348.6 292 60.6
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 5.8e-93 345.1 294 62.6
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 5.8e-93 345.1 296 59.8
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 7.6e-93 344.7 294 59.2
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.2e-92 343.2 289 61.2
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 6.5e-92 341.7 297 58.9
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 3.2e-91 339.3 304 59.9
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.2e-90 337.4 296 60.1
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 2.1e-90 336.7 297 58.9
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 2.7e-90 336.3 292 59.2
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 3.5e-90 335.9 296 59.8
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 4.6e-90 335.5 293 58.7
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 6.1e-90 335.1 296 57.4
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 6.1e-90 335.1 297 58.6
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 7.9e-90 334.7 293 59.0
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 7.9e-90 334.7 296 59.5
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.8e-89 333.6 294 60.2
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 3.9e-89 332.4 297 57.6
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 3.9e-89 332.4 297 58.6
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 3.9e-89 332.4 297 57.9
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 6.7e-89 331.6 297 58.6
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 6.7e-89 331.6 297 58.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.1e-88 330.9 297 57.9
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.5e-88 330.5 294 58.5
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.9e-88 330.1 297 57.9
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 4.3e-88 328.9 296 58.4
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 7.4e-88 328.2 296 56.4
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 2.2e-87 326.6 298 57.0
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 1.1e-86 324.3 295 56.9
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.4e-86 323.9 296 57.1
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.4e-86 323.2 297 57.2
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 5.3e-86 322.0 268 60.8
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 6.9e-86 321.6 301 56.5
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 3.4e-85 319.3 284 58.1
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 5.9e-85 318.5 296 57.4
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 2.9e-84 316.2 297 56.6
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 8.5e-84 314.7 293 57.0
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 1.4e-83 313.9 297 55.2
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 1.4e-83 313.9 297 55.2
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 1.9e-83 313.5 296 56.4
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 2.5e-83 313.2 291 57.0
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 4.2e-83 312.4 297 55.6
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 4.2e-83 312.4 296 55.7
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 7.2e-83 311.6 295 54.9
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 9.4e-83 311.2 297 55.9
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.6e-82 310.5 296 55.1
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 2.1e-82 310.1 300 55.3
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 3.6e-82 309.3 297 54.9
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.4e-81 307.4 294 53.4
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 6.7e-81 305.1 295 53.6
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 1.1e-80 304.3 296 53.4
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 1.5e-80 303.9 297 53.2
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 9.7e-80 301.2 296 53.0
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.3e-79 300.8 297 53.5
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 2.2e-79 300.1 294 54.1
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 3.7e-79 299.3 298 54.4
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 4.8e-79 298.9 297 54.2
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 6.3e-79 298.5 297 53.5
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.9e-75 287.0 296 51.7
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 7.2e-75 285.0 297 51.9
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.3e-72 276.2 211 68.7
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 2.8e-71 273.1 266 54.5
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 3.1e-70 269.6 297 51.2
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 7.0e-70 268.5 306 48.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.2e-69 267.7 306 48.4
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.5e-69 266.2 201 69.2
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 6.7e-65 251.9 269 50.9
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 9.7e-64 248.1 238 54.2
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 4.2e-59 232.6 200 61.5
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 5.5e-59 232.3 266 52.3
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.6e-58 230.7 300 45.0
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 2.4e-54 216.9 262 49.6
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 9.4e-51 204.9 171 67.8
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.8e-49 200.7 248 43.1
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.8e-38 164.1 184 50.0
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.5e-32 144.4 294 32.0
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 2.6e-32 143.7 244 36.5
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.4e-30 137.9 95 67.4
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 5.6e-27 125.9 121 54.5
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 3.1e-25 120.2 116 52.6
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 2.6e-24 117.1 128 53.1
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.2e-23 114.0 128 51.6
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.9e-23 113.6 128 51.6
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 8.3e-23 112.1 120 51.7
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 2.4e-22 110.5 267 30.3
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 5.4e-22 109.4 236 36.9
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 1.2e-21 108.2 120 51.7
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 1.0e-20 105.1 103 58.3
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 1.0e-20 105.1 120 50.8
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.1e-19 101.7 67 73.1
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 1.5e-19 101.3 67 71.6
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 4.7e-18 96.3 131 45.8
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 4.6e-13 79.7 63 57.1
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.9e-11 74.3 51 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 1.3e-07 61.6 102 36.3
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 2.9e-07 60.5 79 48.1


User provided reference genes

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