Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010786001 Vitis vinifera HOM05D003141 ORTHO05D003633 2.5e-49 198.4 95 100.0
GSVIVG01010774001 Vitis vinifera HOM05D003141 ORTHO05D003633 2.1e-11 72.4 34 97.1
GSVIVG01004716001 Vitis vinifera HOM05D003141 ORTHO05D003633 4.7e-11 71.2 33 97.0
Glyma.01G208600 Glycine max HOM05D003141 ORTHO05D003633 1.2e-09 66.6 33 90.9
Glyma.11G033600 Glycine max HOM05D003141 ORTHO05D003633 1.2e-09 66.6 33 90.9
Phvul.002G057800 Phaseolus vulgaris HOM05D003141 ORTHO05D003633 1.2e-09 66.6 33 90.9
Haze_07903 Corylus avellana HOM05D003141 ORTHO05D003633 1.5e-09 66.2 33 90.9
Psat4g072560 Pisum sativum HOM05D003141 ORTHO05D003633 1.5e-09 66.2 33 90.9
QL12p011773 Quercus lobata HOM05D003141 ORTHO05D003633 1.5e-09 66.2 33 90.9
QL12p011944 Quercus lobata HOM05D003141 ORTHO05D003633 1.5e-09 66.2 33 90.9
Ca_21973_v3 Cicer arietinum L. HOM05D003141 ORTHO05D003633 3.4e-09 65.1 33 87.9
Lj4g0011011 Lotus japonicus HOM05D003141 ORTHO05D003633 3.4e-09 65.1 33 87.9
Lalb_Chr05g0214411 Lupinus albus HOM05D003141 ORTHO05D003633 3.4e-09 65.1 33 90.9
ClCG10G002580 Citrullus lanatus HOM05D003141 ORTHO05D003633 4.4e-09 64.7 33 90.9
Phvul.003G221300 Phaseolus vulgaris HOM05D003141 ORTHO05D003633 4.4e-09 64.7 37 78.4
COL.COLO4_37160 Corchorus olitorius HOM05D003141 ORTHO05D003633 5.7e-09 64.3 33 87.9
Duzib068G0714 Durio zibethinus HOM05D003141 ORTHO05D003633 5.7e-09 64.3 33 87.9
MD06G1057100 Malus domestica HOM05D003141 ORTHO05D003633 5.7e-09 64.3 33 87.9
Thecc.03G249800 Theobroma cacao HOM05D003141 ORTHO05D003633 5.7e-09 64.3 33 87.9
VMungo0251G2467 Vigna mungo HOM05D003141 ORTHO05D003633 5.7e-09 64.3 37 78.4
MELO3C013931.2 Cucumis melo HOM05D003141 ORTHO05D003633 7.5e-09 63.9 78 51.3
Lj2g0024874 Lotus japonicus HOM05D003141 ORTHO05D003633 7.5e-09 63.9 32 90.6
Lalb_Chr09g0330011 Lupinus albus HOM05D003141 ORTHO05D003633 7.5e-09 63.9 33 84.8
TPR.G37647 Trifolium pratense HOM05D003141 ORTHO05D003633 7.5e-09 63.9 33 87.9
VMungo1215G1426 Vigna mungo HOM05D003141 ORTHO05D003633 7.5e-09 63.9 33 87.9
Ciclev10018443m.g Citrus clementina HOM05D003141 ORTHO05D003633 9.8e-09 63.5 33 84.8
CsaV3_3G002610 Cucumis sativus L. HOM05D003141 ORTHO05D003633 9.8e-09 63.5 78 51.3
TPR.G18122 Trifolium pratense HOM05D003141 ORTHO05D003633 9.8e-09 63.5 33 84.8
Atru.chr9.1295 Acer truncatum HOM05D003141 ORTHO05D003633 1.7e-08 62.8 33 84.8
Cpa.g.sc29.173 Carica papaya HOM05D003141 ORTHO05D003633 1.7e-08 62.8 33 84.8
Glyma.05G060300 Glycine max HOM05D003141 ORTHO05D003633 1.7e-08 62.8 33 84.8
Psat2g177640 Pisum sativum HOM05D003141 ORTHO05D003633 1.7e-08 62.8 33 84.8
AL7G37390 Arabidopsis lyrata HOM05D003141 ORTHO05D003633 2.2e-08 62.4 52 61.5
arahy.Tifrunner.gnm1.ann1.YK7683 Arachis hypogaea HOM05D003141 ORTHO05D003633 2.2e-08 62.4 32 87.5
arahy.Tifrunner.gnm1.ann1.ZLH3PG Arachis hypogaea HOM05D003141 ORTHO05D003633 2.2e-08 62.4 32 87.5
CiPaw.12G051500 Carya illinoinensis HOM05D003141 ORTHO05D003633 2.2e-08 62.4 33 84.8
Sabra03G0047900 Salix brachista HOM05D003141 ORTHO05D003633 2.2e-08 62.4 33 84.8
Aa31LG6G80 Aethionema arabicum HOM05D003141 ORTHO05D003633 2.8e-08 62.0 52 61.5
CSS0047611 Camellia sinensis var. sinensis HOM05D003141 ORTHO05D003633 2.8e-08 62.0 33 84.8
Dinv21645 Davidia involucrata HOM05D003141 ORTHO05D003633 2.8e-08 62.0 33 84.8
Potri.003G077600 Populus trichocarpa HOM05D003141 ORTHO05D003633 2.8e-08 62.0 33 84.8
Prupe.5G068000 Prunus persica HOM05D003141 ORTHO05D003633 2.8e-08 62.0 33 81.8
Rhsim07G0109900 Rhododendron simsii HOM05D000370 ORTHO05D007301 2.8e-08 62.0 33 84.8
Sed0019628 Sechium edule HOM05D003141 ORTHO05D003633 2.8e-08 62.0 33 84.8
Sp7g16850 Schrenkiella parvula HOM05D003141 ORTHO05D003633 3.7e-08 61.6 52 59.6
CANSAT21G0191 Cannabis sativa HOM05D003141 ORTHO05D003633 4.9e-08 61.2 33 81.8
Ca_24583_v3 Cicer arietinum L. HOM05D003141 ORTHO05D003633 4.9e-08 61.2 33 81.8
Manes.02G040600 Manihot esculenta HOM05D003141 ORTHO05D003633 4.9e-08 61.2 33 84.8
Thhalv10024186m.g Eutrema salsugineum HOM05D003141 ORTHO05D003633 6.3e-08 60.8 52 59.6
AT4G17330 Arabidopsis thaliana HOM05D003141 ORTHO05D003633 8.3e-08 60.5 52 59.6
Carub.0007s2408 Capsella rubella HOM05D003141 ORTHO05D003633 8.3e-08 60.5 52 59.6
RcHm_v2.0_Chr7g0203541 Rosa chinensis HOM05D003141 ORTHO05D003633 1.1e-07 60.1 33 81.8
Sabra01G0134100 Salix brachista HOM05D003141 ORTHO05D003633 1.1e-07 60.1 33 81.8
Gohir.D11G026200 Gossypium hirsutum HOM05D003141 ORTHO05D003633 1.4e-07 59.7 32 84.4
Gorai.007G028500 Gossypium raimondii HOM05D003141 ORTHO05D003633 1.4e-07 59.7 32 84.4
Lalb_Chr05g0221221 Lupinus albus HOM05D003141 ORTHO05D003633 1.4e-07 59.7 33 78.8
Manes.01G081400 Manihot esculenta HOM05D003141 ORTHO05D003633 1.4e-07 59.7 33 81.8
CARHR223940 Cardamine hirsuta HOM05D003141 ORTHO05D003633 2.4e-07 58.9 33 75.8
Lj8A264T56 Lonicera japonica HOM05D003141 ORTHO05D003633 2.4e-07 58.9 33 78.8
PGR042G4011 Punica granatum HOM05D003141 ORTHO05D003633 3.1e-07 58.5 33 75.8
CSS0026981 Camellia sinensis var. sinensis HOM05D003141 ORTHO05D003633 4.1e-07 58.2 33 78.8
HanXRQChr16g0510701 Helianthus annuus HOM05D003141 ORTHO05D003633 5.4e-07 57.8 70 45.7
Potri.001G157300 Populus trichocarpa HOM05D003141 ORTHO05D003633 5.4e-07 57.8 33 78.8
Duzib205G1689 Durio zibethinus HOM05D003141 ORTHO05D003633 7.0e-07 57.4 33 81.8
Eucgr.D02089 Eucalyptus grandis HOM05D003141 ORTHO05D003633 7.0e-07 57.4 32 81.2
FvH4_5g19090 Fragaria vesca HOM05D003141 ORTHO05D003633 7.0e-07 57.4 33 78.8
FAN08G3437 Fragaria x ananassa HOM05D003141 ORTHO05D003633 7.0e-07 57.4 33 78.8
FAN13G0222 Fragaria x ananassa HOM05D003141 ORTHO05D003633 7.0e-07 57.4 33 78.8
FAN18G0989 Fragaria x ananassa HOM05D003141 ORTHO05D003633 7.0e-07 57.4 33 78.8
TWI15G0894 Tripterygium wilfordii HOM05D003141 ORTHO05D003633 9.2e-07 57.0 33 78.8
Medtr4g100800 Medicago truncatula HOM05D003141 ORTHO05D003633 1.2e-06 56.6 30 86.7
Gohir.A12G216300 Gossypium hirsutum HOM05D003141 ORTHO05D003633 2.0e-06 55.8 33 78.8
Gohir.D12G218900 Gossypium hirsutum HOM05D003141 ORTHO05D003633 2.0e-06 55.8 33 78.8
Gorai.008G234500 Gossypium raimondii HOM05D003141 ORTHO05D003633 2.0e-06 55.8 33 78.8
MD04G1062800 Malus domestica HOM05D003141 ORTHO05D003633 2.0e-06 55.8 33 75.8
Dinv39155 Davidia involucrata HOM05D003141 ORTHO05D003633 2.7e-06 55.5 32 78.1
TAR636G0976 Trochodendron aralioides HOM05D003141 ORTHO05D003633 2.7e-06 55.5 37 70.3
BcaNung00101 Brassica carinata HOM05D003141 ORTHO05D003633 3.5e-06 55.1 33 72.7
FAN04G0074 Fragaria x ananassa HOM05D003141 ORTHO05D003633 5.9e-06 54.3 33 75.8
Zm00001eb391270 Zea mays HOM05D003141 ORTHO05D003633 5.9e-06 54.3 40 60.0


User provided reference genes

Program Settings