Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010785001 Vitis vinifera HOM05D006251 ORTHO05D007695 1.3e-55 219.5 113 100.0
GSVIVG01010778001 Vitis vinifera HOM05D006251 ORTHO05D007695 5.7e-48 194.1 107 93.5
ClCG08G010490 Citrullus lanatus HOM05D006251 ORTHO05D007695 5.9e-45 184.1 106 87.7
Cfa008862 Carpinus fangiana HOM05D006251 ORTHO05D007695 1.0e-44 183.3 106 88.7
MELO3C011414.2 Cucumis melo HOM05D006251 ORTHO05D007695 1.7e-44 182.6 99 91.9
Dinv20151 Davidia involucrata HOM05D006251 ORTHO05D007695 1.7e-44 182.6 106 87.7
TWI79G1568 Tripterygium wilfordii HOM05D006251 ORTHO05D007695 1.7e-44 182.6 105 88.6
Gohir.A12G057700 Gossypium hirsutum HOM05D006251 ORTHO05D007695 2.2e-44 182.2 106 86.8
Gohir.D12G057500 Gossypium hirsutum HOM05D006251 ORTHO05D007695 2.2e-44 182.2 106 86.8
Gorai.008G060600 Gossypium raimondii HOM05D006251 ORTHO05D007695 2.2e-44 182.2 106 86.8
CiPaw.05G123800 Carya illinoinensis HOM05D006251 ORTHO05D007695 5.0e-44 181.0 106 85.8
MD16G1059400 Malus domestica HOM05D006251 ORTHO05D007695 5.0e-44 181.0 106 85.8
Ciclev10032914m.g Citrus clementina HOM05D006251 ORTHO05D007695 6.5e-44 180.6 107 86.9
MD13G1060000 Malus domestica HOM05D006251 ORTHO05D007695 6.5e-44 180.6 99 90.9
CsaV3_6G033740 Cucumis sativus L. HOM05D006251 ORTHO05D007695 1.1e-43 179.9 106 85.8
Atru.chr11.1602 Acer truncatum HOM05D006251 ORTHO05D007695 1.5e-43 179.5 107 86.0
Nn3g17499 Nelumbo nucifera HOM05D006251 ORTHO05D007695 1.5e-43 179.5 107 85.0
Thecc.01G144600 Theobroma cacao HOM05D006251 ORTHO05D007695 1.5e-43 179.5 106 85.8
CSS0009604 Camellia sinensis var. sinensis HOM05D006251 ORTHO05D007695 1.9e-43 179.1 107 85.0
COL.COLO4_12139 Corchorus olitorius HOM05D006251 ORTHO05D007695 1.9e-43 179.1 106 84.9
Duzib147G1163 Durio zibethinus HOM05D006251 ORTHO05D007695 1.9e-43 179.1 106 85.8
Prupe.1G289400 Prunus persica HOM05D006251 ORTHO05D007695 1.9e-43 179.1 106 84.9
Actinidia16152 Actinidia chinensis HOM05D006251 ORTHO05D007695 2.5e-43 178.7 107 86.0
Haze_11885 Corylus avellana HOM05D006251 ORTHO05D007695 2.5e-43 178.7 99 91.9
QL03p073745 Quercus lobata HOM05D006251 ORTHO05D007695 5.5e-43 177.6 99 92.9
Manes.01G026600 Manihot esculenta HOM05D006251 ORTHO05D007695 2.1e-42 175.6 99 87.9
Lalb_Chr10g0098941 Lupinus albus HOM05D006251 ORTHO05D007695 2.7e-42 175.3 99 87.9
VMungo1215G0794 Vigna mungo HOM05D006251 ORTHO05D007695 2.7e-42 175.3 113 79.6
Ca_05001_v3 Cicer arietinum L. HOM05D006251 ORTHO05D007695 4.7e-42 174.5 99 87.9
Glyma.02G120500 Glycine max HOM05D006251 ORTHO05D007695 4.7e-42 174.5 99 85.9
Lj3A1029T38 Lonicera japonica HOM05D006251 ORTHO05D007695 1.0e-41 173.3 99 86.9
Eucgr.G02430 Eucalyptus grandis HOM05D006251 ORTHO05D007695 1.4e-41 172.9 106 84.0
Rhsim09G0125900 Rhododendron simsii HOM05D000634 ORTHO05D007695 1.4e-41 172.9 99 86.9
Glyma.01G062300 Glycine max HOM05D006251 ORTHO05D007695 4.0e-41 171.4 99 83.8
CANSAT64G0858 Cannabis sativa HOM05D006251 ORTHO05D007695 5.2e-41 171.0 106 84.9
Aqoxy3G00920 Aquilegia oxysepala HOM05D006251 ORTHO05D007695 6.8e-41 170.6 107 80.4
DCAR_030047 Daucus carota HOM05D006251 ORTHO05D007695 6.8e-41 170.6 105 82.9
Phvul.003G040600 Phaseolus vulgaris HOM05D006251 ORTHO05D007695 6.8e-41 170.6 99 84.8
PGR119G0343 Punica granatum HOM05D006251 ORTHO05D007695 1.5e-40 169.5 107 82.2
Sc04g0007470 Simmondsia chinensis HOM05D006251 ORTHO05D007695 2.0e-40 169.1 99 86.9
vmacro10437 Vaccinium macrocarpon HOM05D006251 ORTHO05D007695 2.0e-40 169.1 99 84.8
PSO017G1239 Papaver somniferum HOM05D006251 ORTHO05D007695 2.6e-40 168.7 107 80.4
Lsat_1_v5_gn_3_53680 Lactuca sativa HOM05D006251 ORTHO05D007695 3.4e-40 168.3 107 81.3
PSO478G0833 Papaver somniferum HOM05D006251 ORTHO05D007695 3.4e-40 168.3 107 79.4
THA.LOC104812006 Tarenaya hassleriana HOM05D006251 ORTHO05D007695 3.4e-40 168.3 107 81.3
Cc11_g11800 Coffea canephora HOM05D006251 ORTHO05D007695 7.5e-40 167.2 98 85.7
BraA06t24166Z Brassica rapa HOM05D006251 ORTHO05D007695 1.7e-39 166.0 99 81.8
Medtr5g044970 Medicago truncatula HOM05D006251 ORTHO05D007695 1.7e-39 166.0 99 84.8
TPR.G23760 Trifolium pratense HOM05D006251 ORTHO05D007695 1.7e-39 166.0 99 84.8
RcHm_v2.0_Chr4g0437961 Rosa chinensis HOM05D006251 ORTHO05D007695 2.2e-39 165.6 99 83.8
AL1G25480 Arabidopsis lyrata HOM05D006251 ORTHO05D007695 2.8e-39 165.2 99 80.8
HanXRQChr15g0477161 Helianthus annuus HOM05D006251 ORTHO05D007695 2.8e-39 165.2 107 79.4
Carub.0001s1343 Capsella rubella HOM05D006251 ORTHO05D007695 3.7e-39 164.9 99 80.8
BcaB02g06466 Brassica carinata HOM05D006251 ORTHO05D007695 4.8e-39 164.5 99 80.8
BcaC05g25275 Brassica carinata HOM05D006251 ORTHO05D007695 4.8e-39 164.5 108 75.0
C05p11520 Brassica napus HOM05D006251 ORTHO05D007695 4.8e-39 164.5 108 75.0
BolC5t29901H Brassica oleracea HOM05D006251 ORTHO05D007695 4.8e-39 164.5 108 75.0
Thhalv10008898m.g Eutrema salsugineum HOM05D006251 ORTHO05D007695 4.8e-39 164.5 99 80.8
FvH4_4g29710 Fragaria vesca HOM05D006251 ORTHO05D007695 6.3e-39 164.1 99 83.8
FAN07G0390 Fragaria x ananassa HOM05D000634 ORTHO05D007695 6.3e-39 164.1 99 83.8
FAN12G1640 Fragaria x ananassa HOM05D006251 ORTHO05D007695 6.3e-39 164.1 99 83.8
FAN17G1351 Fragaria x ananassa HOM05D006251 ORTHO05D007695 6.3e-39 164.1 99 83.8
FAN22G1444 Fragaria x ananassa HOM05D006251 ORTHO05D007695 6.3e-39 164.1 99 83.8
Sp1g12220 Schrenkiella parvula HOM05D006251 ORTHO05D007695 6.3e-39 164.1 99 80.8
Ah.03g138780 Amaranthus hybridus HOM05D006251 ORTHO05D007695 1.8e-38 162.5 107 76.6
EL10Ac6g15019 Beta vulgaris HOM05D006251 ORTHO05D007695 1.8e-38 162.5 107 77.6
CARHR014090 Cardamine hirsuta HOM05D006251 ORTHO05D007695 1.8e-38 162.5 108 73.1
arahy.Tifrunner.gnm1.ann1.BKZY3B Arachis hypogaea HOM05D006251 ORTHO05D007695 4.1e-38 161.4 106 77.4
SalBow2G3351 Salvia bowleyana HOM05D006251 ORTHO05D007695 4.1e-38 161.4 105 79.0
Solyc04g005350.3 Solanum lycopersicum HOM05D006251 ORTHO05D007695 7.0e-38 160.6 105 79.0
Sopen04g001330 Solanum pennellii HOM05D006251 ORTHO05D007695 7.0e-38 160.6 105 79.0
unitig_22.g6893 Utricularia gibba HOM05D006251 ORTHO05D007695 7.0e-38 160.6 99 82.8
Aa31LG1G1230 Aethionema arabicum HOM05D006251 ORTHO05D007695 1.6e-37 159.5 100 79.0
AT1G13690 Arabidopsis thaliana HOM05D006251 ORTHO05D007695 1.6e-37 159.5 99 76.8
arahy.Tifrunner.gnm1.ann1.5K1Z4H Arachis hypogaea HOM05D006251 ORTHO05D007695 1.6e-37 159.5 106 76.4
AUR62007897 Chenopodium quinoa HOM05D006251 ORTHO05D007695 1.6e-37 159.5 107 74.8
Migut.E00044 Erythranthe guttata HOM05D006251 ORTHO05D007695 1.6e-37 159.5 108 75.9
TAR622G1376 Trochodendron aralioides HOM05D006251 ORTHO05D007695 2.7e-37 158.7 98 82.7
Zm00001eb219260 Zea mays HOM05D006251 ORTHO05D007695 4.5e-37 157.9 106 77.4
Potri.008G097500 Populus trichocarpa HOM05D006251 ORTHO05D007695 7.7e-37 157.1 107 76.6
MBI16_g03090_MAGBIO Magnolia biondii HOM05D006251 ORTHO05D007695 1.3e-36 156.4 93 84.9
HPP92_017644 Vanilla planifolia HOM05D006251 ORTHO05D007695 1.3e-36 156.4 112 73.2
SGA_v2.0_scaffold59G20670 Striga asiatica HOM05D006251 ORTHO05D007695 6.5e-36 154.1 99 78.8
CDE07G1948 Ceratophyllum demersum HOM05D006251 ORTHO05D007695 8.5e-36 153.7 99 81.8
ECA246G1802 Erigeron canadensis HOM05D006251 ORTHO05D007695 1.9e-35 152.5 107 74.8
MSTRG.2302 Avicennia marina HOM05D006251 ORTHO05D007695 3.2e-35 151.8 99 78.8
Migut.K00754 Erythranthe guttata HOM05D006251 ORTHO05D007695 4.2e-35 151.4 103 75.7
Lj2g0007519 Lotus japonicus HOM05D006251 ORTHO05D007695 6.1e-34 147.5 105 72.4
Haze_20966 Corylus avellana HOM05D006251 ORTHO05D007695 7.5e-32 140.6 186 47.8
PGSC0003DMG400001940 Solanum tuberosum HOM05D006251 ORTHO05D007695 9.8e-32 140.2 147 56.5
Sed0021896 Sechium edule HOM05D006251 ORTHO05D007695 2.2e-31 139.0 99 75.8
ATR0827G163 Amborella trichopoda HOM05D006251 ORTHO05D007695 2.0e-29 132.5 99 70.7
Pp3c23_9430 Physcomitrium patens HOM05D006251 ORTHO05D007695 3.8e-28 128.3 99 65.7
Pp3c24_3880 Physcomitrium patens HOM05D006251 ORTHO05D007695 2.8e-26 122.1 104 59.6
Nitab4.5_0008776g0040 Nicotiana tabacum HOM05D006251 ORTHO05D007695 8.9e-25 117.1 107 59.8
Nitab4.5_0001118g0050 Nicotiana tabacum HOM05D006251 ORTHO05D007695 1.2e-24 116.7 107 59.8
Dinv34051 Davidia involucrata HOM05D006251 ORTHO05D007695 5.7e-24 114.4 54 96.3
Psat2g131760 Pisum sativum HOM05D006251 ORTHO05D007695 9.8e-24 113.6 55 92.7
Potri.010G157000 Populus trichocarpa HOM05D006251 ORTHO05D007695 6.4e-23 110.9 98 66.3
CSS0036021 Camellia sinensis var. sinensis HOM05D006251 ORTHO05D007695 1.8e-22 109.4 72 80.6
CBR_g6581 Chara braunii HOM05D006251 ORTHO05D007695 5.4e-22 107.8 85 64.7
Mapoly0003s0262 Marchantia polymorpha HOM05D006251 ORTHO05D007695 5.9e-21 104.4 99 56.6
SMO356G0608 Selaginella moellendorffii HOM05D006251 ORTHO05D007695 3.0e-20 102.1 85 58.8
SMO356G0419 Selaginella moellendorffii HOM05D006251 ORTHO05D007695 5.0e-20 101.3 68 67.6
Nitab4.5_0007615g0010 Nicotiana tabacum HOM05D006251 ORTHO05D007695 1.1e-19 100.1 99 57.6
SEGI_14342 Sequoiadendron giganteum HOM05D006251 ORTHO05D007695 1.9e-19 99.4 99 57.6
SMO340G0125 Selaginella moellendorffii HOM05D006251 ORTHO05D007695 3.3e-19 98.6 83 59.0
Peaxi162Scf00667g00025 Petunia axillaris HOM05D006251 ORTHO05D007695 1.8e-17 92.8 99 54.5
AUR62003081 Chenopodium quinoa HOM05D006251 ORTHO05D007695 7.5e-16 87.4 72 63.9
AagrBONN_evm.TU.Sc2ySwM_344.2145 Anthoceros agrestis HOM05D006251 ORTHO05D007695 3.2e-14 82.0 95 50.5
AUR62003080 Chenopodium quinoa HOM05D006251 ORTHO05D007695 2.3e-12 75.9 35 94.3
Hma1.2p1_0566F.1_g179960 Hydrangea macrophylla HOM05D006251 ORTHO05D007695 2.3e-12 75.9 35 94.3
Sed0015628 Sechium edule HOM05D006251 ORTHO05D007695 2.3e-12 75.9 35 94.3
Cre06.g288750 Chlamydomonas reinhardtii HOM05D006251 ORTHO05D007695 3.9e-12 75.1 69 50.7
Hma1.2p1_0566F.1_g179940 Hydrangea macrophylla HOM05D006251 ORTHO05D007695 1.9e-11 72.8 47 83.0
MCO13G196 Micromonas commoda HOM05D006251 ORTHO05D007695 6.2e-10 67.8 52 55.8
CBR_g28640 Chara braunii HOM05D006251 ORTHO05D007695 5.8e-08 61.2 35 74.3
Os03g0600400 Oryza sativa ssp. japonica HOM05D006251 ORTHO05D007695 2.9e-07 58.9 54 61.1


User provided reference genes

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