Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010779001 Vitis vinifera HOM05D003336 ORTHO05D003807 1.3e-105 386.3 189 100.0
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 5.9e-98 360.9 187 91.4
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 8.5e-97 357.1 185 92.4
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 8.5e-97 357.1 185 91.9
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 1.1e-96 356.7 185 92.4
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 1.1e-96 356.7 186 91.9
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 1.9e-96 355.9 186 90.3
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 2.5e-96 355.5 186 90.3
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 2.5e-96 355.5 186 91.4
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 4.2e-96 354.8 186 90.9
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 4.2e-96 354.8 185 90.8
Ca_10458_v3 Cicer arietinum L. HOM05D003336 ORTHO05D003807 7.2e-96 354.0 185 90.3
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 7.2e-96 354.0 186 89.8
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 7.2e-96 354.0 185 90.3
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 7.2e-96 354.0 186 90.9
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 7.2e-96 354.0 185 90.3
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 9.4e-96 353.6 185 90.8
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 9.4e-96 353.6 185 90.8
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 9.4e-96 353.6 186 90.9
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 9.4e-96 353.6 186 89.8
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 1.2e-95 353.2 186 89.8
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.6e-95 352.8 185 90.3
Haze_21691 Corylus avellana HOM05D003336 ORTHO05D003807 1.6e-95 352.8 185 89.7
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 1.6e-95 352.8 186 90.3
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 1.6e-95 352.8 186 89.2
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 2.1e-95 352.4 186 88.7
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 2.1e-95 352.4 185 89.7
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 2.7e-95 352.1 186 90.3
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 2.7e-95 352.1 186 88.7
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 3.6e-95 351.7 186 90.9
Peaxi162Scf00108g01317 Petunia axillaris HOM05D003336 ORTHO05D003807 3.6e-95 351.7 185 89.7
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 4.7e-95 351.3 185 89.7
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 4.7e-95 351.3 186 90.3
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 4.7e-95 351.3 186 89.8
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 6.1e-95 350.9 185 89.7
Dinv22743 Davidia involucrata HOM05D003336 ORTHO05D003807 6.1e-95 350.9 186 88.7
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 6.1e-95 350.9 185 89.2
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 6.1e-95 350.9 186 90.9
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 6.1e-95 350.9 186 88.2
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 6.1e-95 350.9 186 90.9
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 8.0e-95 350.5 186 90.3
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 8.0e-95 350.5 186 90.3
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 8.0e-95 350.5 185 90.8
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 8.0e-95 350.5 185 90.8
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 8.0e-95 350.5 186 90.3
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 8.0e-95 350.5 183 91.8
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 1.0e-94 350.1 185 88.6
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.0e-94 350.1 186 88.7
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 1.0e-94 350.1 186 90.9
Cfa013247 Carpinus fangiana HOM05D003336 ORTHO05D003807 1.0e-94 350.1 185 88.6
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 1.0e-94 350.1 186 88.7
Duzib175G0004 Durio zibethinus HOM05D003336 ORTHO05D003807 1.4e-94 349.7 185 89.7
FvH4_7g04970 Fragaria vesca HOM05D003336 ORTHO05D003807 1.4e-94 349.7 186 89.2
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.4e-94 349.7 186 90.3
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 1.4e-94 349.7 185 89.7
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 1.4e-94 349.7 186 88.2
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 1.8e-94 349.4 186 88.7
Actinidia35985 Actinidia chinensis HOM05D003336 ORTHO05D003807 2.3e-94 349.0 185 90.3
Actinidia35987 Actinidia chinensis HOM05D003336 ORTHO05D003807 2.3e-94 349.0 185 90.3
Lj6C18T11 Lonicera japonica HOM05D003336 ORTHO05D003807 2.3e-94 349.0 186 89.2
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 2.3e-94 349.0 186 89.2
CSS0038429 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.0e-94 348.6 186 88.2
Aqoxy1G02652 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 4.0e-94 348.2 183 89.1
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.0e-94 348.2 186 89.8
Nitab4.5_0000233g0220 Nicotiana tabacum HOM05D003336 ORTHO05D003807 5.2e-94 347.8 184 89.1
vmacro00616 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 5.2e-94 347.8 186 87.6
vmacro00649 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 5.2e-94 347.8 186 87.6
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 6.7e-94 347.4 185 89.2
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 6.7e-94 347.4 186 88.2
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 8.8e-94 347.1 186 88.2
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 8.8e-94 347.1 186 88.2
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 8.8e-94 347.1 183 90.2
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 1.2e-93 346.7 185 88.6
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 1.2e-93 346.7 185 88.6
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 1.2e-93 346.7 185 89.2
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 1.5e-93 346.3 186 88.7
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.5e-93 346.3 186 87.6
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 2.0e-93 345.9 186 88.7
Cc04_g08960 Coffea canephora HOM05D003336 ORTHO05D003807 2.6e-93 345.5 186 87.6
CSS0035259 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.3e-93 345.1 186 87.1
SalBow1G0055 Salvia bowleyana HOM05D003336 ORTHO05D003807 3.3e-93 345.1 185 88.6
SalBow1G1314 Salvia bowleyana HOM05D003336 ORTHO05D003807 3.3e-93 345.1 185 88.6
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 5.7e-93 344.4 186 87.6
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 9.7e-93 343.6 186 87.1
MBI01_g10303_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 1.7e-92 342.8 182 89.0
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 2.8e-92 342.0 186 86.6
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 2.8e-92 342.0 186 87.1
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 3.7e-92 341.7 186 86.6
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 3.7e-92 341.7 186 87.1
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 3.7e-92 341.7 186 86.6
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 3.7e-92 341.7 186 87.1
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 3.7e-92 341.7 182 88.5
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 8.2e-92 340.5 186 87.1
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 1.8e-91 339.3 184 88.0
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 5.3e-91 337.8 186 86.6
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.0e-90 335.9 185 86.5
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.5e-90 334.7 178 88.8
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 1.7e-89 332.8 183 85.8
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 2.2e-89 332.4 185 85.4
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 2.9e-89 332.0 183 85.2
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 6.5e-89 330.9 183 86.3
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-88 329.3 186 85.5
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-88 329.3 186 85.5
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 8.0e-87 323.9 182 83.0
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 5.2e-86 321.2 182 83.0
Nitab4.5_0005460g0060 Nicotiana tabacum HOM05D003336 ORTHO05D003807 6.8e-86 320.9 173 88.4
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 8.8e-86 320.5 183 82.0
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 2.6e-85 318.9 182 82.4
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 3.4e-85 318.5 183 83.1
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 4.4e-85 318.2 183 82.5
BcaB07g33710 Brassica carinata HOM05D003336 ORTHO05D003807 1.3e-84 316.6 175 85.1
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.9e-81 305.4 182 80.8
MELO3C000960.2 Cucumis melo HOM05D003336 ORTHO05D003807 3.8e-81 305.1 165 87.3
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 9.5e-80 300.4 180 77.8
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 6.1e-79 297.7 183 75.4
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.9e-76 288.1 187 76.5
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 2.0e-74 282.7 186 76.9
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 1.7e-73 279.6 144 92.4
Haze_26283 Corylus avellana HOM05D003336 ORTHO05D003807 9.5e-72 273.9 183 67.8
Sp7g20730 Schrenkiella parvula HOM05D003336 ORTHO05D003807 4.7e-71 271.6 152 84.9
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 3.1e-70 268.9 182 75.3
MELO3C028715.2 Cucumis melo HOM05D003336 ORTHO05D003807 3.1e-70 268.9 147 86.4
CDE02G0747 Ceratophyllum demersum HOM05D003336 ORTHO05D003807 3.4e-69 265.4 183 71.6
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 1.1e-67 260.4 146 82.9
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.9e-67 259.6 141 87.2
Lalb_Chr09g0333021 Lupinus albus HOM05D003336 ORTHO05D003807 6.0e-66 254.6 180 72.8
Sed0015341 Sechium edule HOM05D003336 ORTHO05D003807 3.0e-65 252.3 201 66.2
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 4.7e-63 245.0 200 57.0
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 5.2e-62 241.5 125 92.0
Potri.007G129400 Populus trichocarpa HOM05D003336 ORTHO05D003807 9.8e-61 237.3 136 82.4
Lj6C12T9 Lonicera japonica HOM05D003336 ORTHO05D003807 3.2e-59 232.3 143 79.0
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.0e-58 228.0 197 62.9
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.5e-56 223.4 167 69.5
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 1.0e-49 200.7 101 98.0
Atru.chr6.1069 Acer truncatum HOM05D003336 ORTHO05D003807 4.4e-45 185.3 109 79.8
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 1.0e-41 174.1 90 91.1
Prupe.1G196100 Prunus persica HOM05D003336 ORTHO05D003807 9.6e-40 167.5 186 51.1
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.2e-36 156.4 93 82.8
CSS0002456 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.7e-34 149.4 186 50.0
Sabra07G0105400 Salix brachista HOM05D003336 ORTHO05D000611 1.5e-32 143.7 185 47.6
SEGI_10539 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 7.3e-32 141.4 93 73.1
A08p15940 Brassica napus HOM05D003336 ORTHO05D003807 1.3e-31 140.6 109 67.9
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 8.1e-31 137.9 68 97.1
CSS0009752 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.4e-30 137.1 101 69.3
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 4.0e-30 135.6 68 92.6
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 1.5e-29 133.7 68 94.1
CARHR113970 Cardamine hirsuta HOM05D003336 ORTHO05D003807 8.4e-28 127.9 71 91.5
Lalb_Chr05g0230051 Lupinus albus HOM05D003336 ORTHO05D003807 1.9e-27 126.7 67 91.0
CSS0004282 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.0e-25 120.9 101 67.3
Lj6C18T3 Lonicera japonica HOM05D003336 ORTHO05D003807 1.1e-24 117.5 110 58.2
Psat6g173760 Pisum sativum HOM05D003336 ORTHO05D003807 2.5e-24 116.3 63 93.7
RcHm_v2.0_Chr1g0329841 Rosa chinensis HOM05D003336 ORTHO05D003807 3.7e-23 112.5 64 87.5
BraA08t33567Z Brassica rapa HOM05D003336 ORTHO05D003807 9.9e-21 104.4 59 79.7
CSS0005877 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 9.9e-21 104.4 104 56.7
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.4e-20 101.7 186 39.2
AagrBONN_evm.TU.Sc2ySwM_117.2573 Anthoceros agrestis HOM05D001778 ORTHO05D005872 1.6e-18 97.1 124 48.4
Mapoly0019s0039 Marchantia polymorpha HOM05D005501 ORTHO05D007485 2.3e-17 93.2 190 31.6
AagrBONN_evm.TU.Sc2ySwM_117.1161 Anthoceros agrestis HOM05D005501 ORTHO05D007485 1.9e-16 90.1 190 32.1
MCO07G252 Micromonas commoda HOM05D005501 ORTHO05D007485 2.5e-16 89.7 189 32.3
Atru.chr5.287 Acer truncatum HOM05D005501 ORTHO05D007485 3.3e-16 89.4 189 30.2
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 3.3e-16 89.4 49 89.8
CSS0042287 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.6e-16 88.6 69 60.9
Eucgr.E01449 Eucalyptus grandis HOM05D005501 ORTHO05D007485 7.4e-16 88.2 189 33.3
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 2.8e-15 86.3 44 86.4
SMO271G0013 Selaginella moellendorffii HOM05D005501 ORTHO05D007485 3.7e-15 85.9 188 33.0
Pp3c15_10750 Physcomitrium patens HOM05D005501 ORTHO05D007485 6.2e-15 85.1 187 31.6
PGR042G1853 Punica granatum HOM05D005501 ORTHO05D007485 1.1e-14 84.3 189 31.7
Cre15.g639400 Chlamydomonas reinhardtii HOM05D005501 ORTHO05D007485 3.1e-14 82.8 190 32.6
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 3.1e-14 82.8 40 92.5
PSO782G1940 Papaver somniferum HOM05D005501 ORTHO05D007485 5.3e-14 82.0 176 32.4
PSO478G3019 Papaver somniferum HOM05D005501 ORTHO05D007485 9.0e-14 81.3 176 31.8
QL08p052809 Quercus lobata HOM05D005501 ORTHO05D007485 2.0e-13 80.1 189 30.2
Aqoxy7G00665 Aquilegia oxysepala HOM05D005501 ORTHO05D007485 2.6e-13 79.7 189 30.7
ATR0757G194 Amborella trichopoda HOM05D005501 ORTHO05D007485 1.0e-12 77.8 185 29.7
Haze_26798 Corylus avellana HOM05D005501 ORTHO05D008444 2.2e-12 76.6 185 29.7
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 4.9e-12 75.5 190 28.4
PRCOL_00001708 Prasinoderma coloniale HOM05D005501 ORTHO05D007485 4.6e-10 68.9 211 26.5
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.5e-08 63.9 29 96.6
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.5e-08 63.9 29 96.6
Lj4g0011036 Lotus japonicus HOM05D003336 ORTHO05D003807 2.2e-07 60.1 34 79.4


User provided reference genes

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