Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 7.0e-184 647.1 321 100.0
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.8e-115 419.9 333 67.0
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 5.1e-110 401.7 324 62.7
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 6.7e-110 401.4 326 65.6
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 2.5e-109 399.4 328 65.9
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 7.4e-109 397.9 329 66.6
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 3.7e-108 395.6 331 65.0
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 3.7e-108 395.6 323 65.6
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 1.2e-103 380.6 331 63.1
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 1.2e-103 380.6 331 62.5
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 2.7e-103 379.4 308 66.2
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 7.9e-103 377.9 322 64.3
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 1.4e-102 377.1 287 64.1
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.3e-101 372.1 332 61.7
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.3e-100 370.5 308 62.0
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 1.7e-100 370.2 308 62.0
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.7e-100 370.2 334 61.4
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 4.8e-100 368.6 318 61.0
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.4e-99 367.1 326 60.4
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 5.3e-99 365.2 328 61.0
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 4.5e-98 362.1 286 66.1
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 2.2e-97 359.8 337 58.5
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 2.9e-97 359.4 338 57.1
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 5.0e-97 358.6 327 58.1
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 5.0e-97 358.6 331 57.1
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 1.1e-96 357.5 326 58.0
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-96 357.1 332 59.0
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.4e-96 357.1 330 56.7
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.4e-96 357.1 251 70.1
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 1.9e-96 356.7 332 59.0
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.9e-96 356.7 332 59.3
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 1.9e-96 356.7 326 60.1
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 3.2e-96 355.9 335 59.1
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.6e-95 353.6 325 58.8
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.7e-95 352.8 320 59.1
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.7e-95 352.8 325 59.4
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 3.6e-95 352.4 311 59.8
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 7.9e-95 351.3 320 59.1
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.4e-94 350.5 325 59.1
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 1.4e-94 350.5 310 60.6
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.8e-94 350.1 251 68.5
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 2.3e-94 349.7 250 67.6
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 2.3e-94 349.7 314 56.7
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 3.0e-94 349.4 250 67.6
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 3.9e-94 349.0 277 64.6
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 5.1e-94 348.6 276 62.3
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 5.1e-94 348.6 276 62.3
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 8.8e-94 347.8 250 66.8
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.1e-93 347.4 228 75.0
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 2.6e-93 346.3 325 56.3
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 1.3e-92 344.0 328 57.6
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 2.8e-92 342.8 271 63.1
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 2.8e-92 342.8 270 63.0
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 3.7e-92 342.4 248 67.3
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 3.7e-92 342.4 248 67.7
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 4.8e-92 342.0 278 64.0
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 4.8e-92 342.0 253 65.6
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 6.3e-92 341.7 334 56.6
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 8.2e-92 341.3 249 66.7
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.1e-91 340.9 323 57.6
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.8e-91 340.1 320 60.0
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 2.4e-91 339.7 265 64.9
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 5.3e-91 338.6 328 56.4
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 5.3e-91 338.6 329 54.1
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 5.3e-91 338.6 318 58.5
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 5.3e-91 338.6 323 56.7
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 5.3e-91 338.6 323 56.7
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 7.0e-91 338.2 255 65.5
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 7.0e-91 338.2 254 66.1
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 7.0e-91 338.2 316 57.0
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.2e-90 337.4 313 59.7
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 2.0e-90 336.7 320 57.5
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 7.7e-90 334.7 326 56.4
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 1.0e-89 334.3 255 65.9
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 2.2e-89 333.2 329 56.8
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 2.2e-89 333.2 326 54.3
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 3.8e-89 332.4 246 66.7
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 2.5e-88 329.7 281 62.3
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 3.2e-88 329.3 281 62.3
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 2.7e-87 326.2 260 63.5
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.0e-86 324.3 315 54.6
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 2.3e-86 323.2 325 54.8
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 3.9e-86 322.4 260 63.1
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.3e-84 317.4 256 59.8
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.7e-84 315.8 329 53.5
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 6.3e-84 315.1 235 63.8
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 6.3e-84 315.1 299 59.5
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 5.3e-83 312.0 215 70.7
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 7.7e-82 308.1 250 60.8
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 1.0e-81 307.8 250 60.8
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 1.3e-81 307.4 252 61.9
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 4.2e-80 302.4 292 54.1
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 3.6e-79 299.3 379 46.7
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 2.0e-77 293.5 324 50.6
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.0e-77 293.5 277 54.2
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 4.8e-76 288.9 318 50.6
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 2.0e-74 283.5 291 55.0
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 9.4e-72 274.6 242 57.4
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.3e-62 243.4 234 53.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 8.3e-60 235.0 164 68.9
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 3.2e-59 233.0 209 59.3
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.7e-57 227.3 217 54.4
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.6e-53 213.4 159 66.0
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 2.6e-53 213.4 139 79.1
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 1.3e-52 211.1 142 73.9
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 7.8e-50 201.8 270 44.4
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.1e-48 198.0 269 43.1
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 2.5e-48 196.8 247 40.5
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.6e-48 195.7 137 70.8
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 3.1e-46 189.9 187 57.8
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 6.8e-46 188.7 235 43.4
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 7.5e-45 185.3 271 38.0
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 9.8e-45 184.9 154 59.1
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.2e-44 183.7 195 53.8
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 2.5e-40 170.2 137 59.9
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 9.5e-40 168.3 115 66.1
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.1e-38 164.9 131 63.4
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.4e-38 164.5 192 50.5
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 3.6e-31 139.8 138 50.0
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 4.0e-30 136.3 113 59.3
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 1.7e-28 131.0 109 64.2
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.6e-23 114.4 238 34.9
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.0e-18 95.9 64 71.9
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 6.6e-17 92.4 74 64.9
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 3.8e-12 76.6 73 50.7


User provided reference genes

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