Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 1.2e-133 479.9 250 100.0
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 7.3e-120 434.1 250 86.8
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.6e-119 433.0 250 86.0
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 8.0e-119 430.6 248 85.5
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.3e-118 429.1 248 85.1
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.4e-117 425.2 245 86.1
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.7e-116 422.9 248 84.3
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 2.2e-116 422.5 243 85.6
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.1e-115 420.2 246 85.4
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.4e-115 419.9 249 82.3
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 3.2e-115 418.7 246 84.6
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 5.4e-115 417.9 248 83.5
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.2e-114 416.8 248 82.7
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.7e-114 415.6 243 84.0
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.7e-114 415.6 245 84.9
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 5.9e-114 414.5 250 82.0
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 7.8e-114 414.1 248 83.1
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.0e-113 413.7 240 86.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.0e-113 413.7 241 85.5
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.0e-113 412.1 243 83.1
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 6.6e-113 411.0 250 82.0
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.1e-112 410.2 241 84.6
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.5e-112 409.1 250 80.8
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.3e-112 408.3 246 82.5
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 4.3e-112 408.3 245 82.9
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 5.6e-112 407.9 246 80.5
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.1e-111 406.0 245 82.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 2.8e-111 405.6 250 80.8
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 2.8e-111 405.6 246 79.7
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 2.8e-111 405.6 246 79.7
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 3.6e-111 405.2 250 79.6
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 6.2e-111 404.4 249 78.7
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 6.2e-111 404.4 249 78.3
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 6.2e-111 404.4 245 79.2
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.4e-110 403.3 239 82.8
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.4e-110 403.3 239 82.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-110 403.3 245 78.8
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.4e-110 403.3 257 78.2
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 2.3e-110 402.5 249 77.5
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 5.2e-110 401.4 246 81.3
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 6.8e-110 401.0 249 79.1
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 6.8e-110 401.0 250 79.2
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.0e-109 399.4 246 79.7
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.0e-109 399.4 246 78.9
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 3.4e-109 398.7 245 80.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 3.4e-109 398.7 245 79.2
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 4.4e-109 398.3 246 79.3
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 4.4e-109 398.3 250 79.2
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 7.5e-109 397.5 245 79.6
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 2.9e-108 395.6 250 77.2
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.7e-108 395.2 246 76.4
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.9e-108 394.8 246 80.1
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.1e-107 393.7 249 75.5
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.1e-107 393.7 249 75.5
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.1e-107 393.7 249 75.5
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.1e-107 393.7 244 79.5
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.4e-107 393.3 245 76.3
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.9e-107 392.9 245 76.7
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 2.4e-107 392.5 249 76.7
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 5.4e-107 391.3 245 76.3
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.6e-106 389.8 249 77.1
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.6e-106 389.8 252 78.2
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.0e-105 387.1 246 77.6
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 3.0e-105 385.6 245 75.5
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 3.0e-105 385.6 245 75.9
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 8.6e-105 384.0 245 78.8
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.1e-104 383.6 245 76.3
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.5e-104 382.5 250 77.6
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 5.6e-104 381.3 246 74.0
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 9.5e-104 380.6 245 78.4
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.6e-103 379.8 262 73.3
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.3e-102 375.9 249 75.1
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 2.3e-102 375.9 246 74.4
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 8.9e-102 374.0 246 76.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-101 373.2 242 74.0
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 2.9e-100 369.0 234 77.4
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 4.9e-100 368.2 245 74.3
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 3.0e-97 359.0 203 88.7
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 7.3e-96 354.4 246 72.0
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 9.5e-96 354.0 245 71.0
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.8e-95 352.4 249 68.3
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.6e-95 352.1 208 84.6
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.7e-95 351.7 245 70.6
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.0e-93 346.3 253 68.4
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 9.9e-93 344.0 227 75.8
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.9e-92 342.4 227 76.2
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 2.9e-92 342.4 250 66.4
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.1e-91 340.5 213 81.2
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.1e-90 336.3 245 68.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 3.9e-89 332.0 249 69.9
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 1.9e-88 329.7 184 90.8
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.1e-86 323.9 198 76.8
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 8.9e-86 320.9 245 67.3
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.3e-84 317.0 202 81.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.1e-80 303.9 194 71.6
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.2e-77 293.9 245 63.7
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 8.4e-76 287.7 264 62.5
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.0e-73 280.8 240 61.2
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 4.0e-70 268.9 241 54.4
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 2.7e-66 256.1 249 51.8
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.1e-62 244.2 238 52.9
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 6.9e-62 241.5 202 65.3
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.4e-61 239.2 156 73.1
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 7.6e-61 238.0 239 49.8
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 3.5e-58 229.2 236 46.6
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-51 207.6 152 68.4
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 2.5e-51 206.5 149 67.1
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 9.3e-51 204.5 143 69.2
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 5.1e-49 198.7 151 65.6
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 3.3e-48 196.1 120 80.8
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 3.7e-47 192.6 117 81.2
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.4e-46 189.9 132 68.9
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 4.5e-37 159.1 119 68.9
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.5e-32 144.1 92 77.2
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 1.5e-32 144.1 231 37.7
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 4.4e-32 142.5 93 71.0
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 4.8e-31 139.0 91 72.5
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.2e-19 99.8 161 43.5
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 8.8e-17 91.7 71 62.0
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 3.7e-07 59.7 38 68.4
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 6.3e-07 58.9 38 78.9


User provided reference genes

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