Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 9.4e-133 476.9 241 100.0
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 4.6e-87 325.1 240 70.0
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 6.8e-83 311.2 240 66.2
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 7.6e-82 307.8 244 63.9
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 9.9e-82 307.4 245 67.3
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.7e-81 306.6 242 66.5
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 3.7e-81 305.4 242 66.5
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.1e-80 303.9 242 67.4
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.4e-80 303.5 242 67.8
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.4e-80 303.5 240 67.1
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 5.4e-80 301.6 256 61.3
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 5.4e-80 301.6 244 65.6
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 7.1e-80 301.2 242 62.4
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 9.2e-80 300.8 246 65.9
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.2e-79 300.4 242 66.9
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.1e-79 299.7 242 65.3
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 2.7e-79 299.3 240 65.0
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.5e-79 298.9 242 66.9
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 1.3e-78 297.0 260 62.7
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 2.3e-78 296.2 243 60.5
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 3.9e-78 295.4 257 60.3
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 5.1e-78 295.0 241 65.1
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.5e-77 293.5 249 62.2
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.5e-77 293.5 244 64.8
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 1.5e-77 293.5 247 64.0
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 5.6e-77 291.6 238 60.1
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.6e-76 290.0 242 60.3
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.6e-76 290.0 220 68.6
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 4.7e-76 288.5 242 63.2
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 4.7e-76 288.5 242 64.0
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 8.1e-76 287.7 240 62.1
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 1.8e-75 286.6 235 63.0
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.4e-75 286.2 242 63.6
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.1e-75 285.8 249 59.4
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 6.8e-75 284.6 223 64.6
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 8.9e-75 284.3 243 60.1
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 1.2e-74 283.9 241 61.8
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.5e-74 283.5 249 60.6
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 2.0e-74 283.1 247 60.7
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 2.0e-74 283.1 243 62.1
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 2.6e-74 282.7 244 61.5
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 5.8e-74 281.6 239 63.6
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 5.8e-74 281.6 244 60.7
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 9.9e-74 280.8 243 60.5
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 3.8e-73 278.9 251 58.6
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 8.4e-73 277.7 249 62.7
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 2.4e-72 276.2 261 55.9
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 5.4e-72 275.0 246 59.3
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 9.3e-72 274.2 256 56.2
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.2e-71 273.9 241 56.8
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.6e-71 273.5 236 60.2
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 1.6e-71 273.5 242 61.2
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 3.5e-71 272.3 254 58.7
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 4.6e-71 271.9 241 56.8
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 1.7e-70 270.0 236 59.7
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.7e-70 270.0 256 55.9
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 5.1e-70 268.5 188 69.1
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 6.6e-70 268.1 256 55.1
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.1e-69 267.3 223 62.8
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.5e-69 266.9 240 56.7
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.9e-69 266.5 240 56.2
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 2.5e-69 266.2 242 58.3
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 2.5e-69 266.2 197 66.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 4.3e-69 265.4 215 63.3
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 4.3e-69 265.4 256 55.1
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 2.8e-68 262.7 233 57.9
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 1.8e-67 260.0 239 57.3
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.8e-67 260.0 253 54.9
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 6.9e-67 258.1 221 60.6
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 1.3e-65 253.8 231 57.1
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.3e-65 253.8 249 55.8
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 2.2e-65 253.1 234 53.4
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 3.5e-63 245.7 172 69.8
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 7.9e-63 244.6 205 59.5
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 1.3e-62 243.8 203 61.6
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 1.3e-62 243.8 203 61.6
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 1.7e-62 243.4 203 62.6
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 3.0e-62 242.7 196 62.2
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 8.7e-62 241.1 203 62.1
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 1.1e-61 240.7 196 62.8
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.9e-61 240.0 200 62.5
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 7.4e-61 238.0 196 61.2
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.8e-60 235.3 237 52.7
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 8.1e-60 234.6 190 61.1
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.1e-59 234.2 198 60.6
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.4e-59 233.8 203 59.1
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 3.1e-59 232.6 242 53.7
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.2e-58 230.7 231 51.9
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 7.6e-58 228.0 206 57.8
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.3e-57 227.3 206 54.4
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.7e-57 226.9 232 53.0
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 2.3e-54 216.5 144 70.1
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 3.4e-50 202.6 147 68.0
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 1.7e-49 200.3 189 51.9
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 4.9e-49 198.7 204 50.0
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 8.4e-49 198.0 178 60.1
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.9e-48 196.8 246 45.1
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.3e-46 189.9 242 49.6
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 8.2e-44 181.4 185 49.2
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 8.2e-44 181.4 203 48.3
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 1.1e-43 181.0 182 48.9
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.3e-41 174.1 179 50.8
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 6.5e-41 171.8 185 47.6
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 1.4e-40 170.6 218 43.6
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 7.9e-39 164.9 198 44.9
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.9e-33 146.4 238 35.7
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 5.5e-32 142.1 175 47.4
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 2.0e-29 133.7 87 71.3
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 1.1e-27 127.9 163 44.2
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 1.8e-27 127.1 143 51.0
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 7.9e-23 111.7 183 37.7
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.1e-21 107.8 83 63.9
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 3.1e-19 99.8 66 72.7
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 1.2e-15 87.8 156 34.6
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 1.3e-12 77.8 132 37.1
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.3e-12 77.8 99 41.4
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 3.2e-08 63.2 78 43.6
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 2.7e-07 60.1 190 27.9


User provided reference genes

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