Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 3.9e-87 324.7 156 100.0
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 9.0e-36 154.1 102 79.4
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 3.4e-35 152.1 101 78.2
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.0e-34 150.6 101 78.2
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.3e-34 150.2 102 77.5
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.7e-34 149.8 102 76.5
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 2.9e-34 149.1 102 75.5
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.0e-34 148.3 102 75.5
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 5.0e-34 148.3 103 72.8
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 5.0e-34 148.3 102 76.5
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 6.5e-34 147.9 103 75.7
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 8.5e-34 147.5 102 75.5
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 8.5e-34 147.5 101 76.2
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.1e-33 147.1 102 75.5
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.1e-33 147.1 101 76.2
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 1.1e-33 147.1 102 75.5
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.4e-33 146.7 101 76.2
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 3.2e-33 145.6 101 75.2
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.2e-33 145.6 101 75.2
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 3.2e-33 145.6 101 75.2
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 3.2e-33 145.6 101 72.3
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 4.2e-33 145.2 101 75.2
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 4.2e-33 145.2 101 74.3
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 4.2e-33 145.2 103 73.8
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 4.2e-33 145.2 102 74.5
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 7.2e-33 144.4 101 75.2
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 9.4e-33 144.1 101 73.3
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 9.4e-33 144.1 101 77.2
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 1.2e-32 143.7 103 72.8
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 1.2e-32 143.7 103 72.8
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 1.2e-32 143.7 101 73.3
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 1.6e-32 143.3 101 73.3
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.1e-32 142.9 101 73.3
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.1e-32 142.9 102 73.5
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 2.7e-32 142.5 101 73.3
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 3.6e-32 142.1 116 69.0
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.6e-32 142.1 103 70.9
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.6e-32 142.1 103 70.9
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 3.6e-32 142.1 103 71.8
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 4.6e-32 141.7 101 72.3
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 4.6e-32 141.7 101 72.3
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 7.9e-32 141.0 116 68.1
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 7.9e-32 141.0 101 72.3
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 7.9e-32 141.0 101 72.3
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 7.9e-32 141.0 101 71.3
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 7.9e-32 141.0 101 71.3
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 7.9e-32 141.0 104 70.2
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.0e-31 140.6 103 71.8
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 1.4e-31 140.2 101 73.3
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 1.4e-31 140.2 101 73.3
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 1.4e-31 140.2 103 71.8
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 1.4e-31 140.2 101 71.3
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.4e-31 140.2 101 74.3
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 1.8e-31 139.8 101 71.3
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 1.8e-31 139.8 103 71.8
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 2.3e-31 139.4 113 67.3
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 2.3e-31 139.4 103 70.9
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.3e-31 139.4 101 70.3
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 2.3e-31 139.4 101 71.3
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.0e-31 139.0 101 70.3
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 3.9e-31 138.7 103 71.8
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 5.1e-31 138.3 103 70.9
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 5.1e-31 138.3 103 71.8
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 5.1e-31 138.3 103 70.9
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 5.1e-31 138.3 101 71.3
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 6.7e-31 137.9 103 68.9
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 6.7e-31 137.9 98 72.4
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 6.7e-31 137.9 101 71.3
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 6.7e-31 137.9 103 72.8
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 6.7e-31 137.9 97 76.3
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 8.8e-31 137.5 103 68.9
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.5e-30 136.7 100 72.0
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 1.5e-30 136.7 99 70.7
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 1.5e-30 136.7 103 68.9
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 2.0e-30 136.3 101 69.3
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.0e-30 136.3 102 71.6
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 3.3e-30 135.6 103 69.9
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 4.3e-30 135.2 89 79.8
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 4.3e-30 135.2 103 68.9
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 4.3e-30 135.2 101 70.3
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 9.7e-30 134.0 101 68.3
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 9.7e-30 134.0 101 69.3
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 1.3e-29 133.7 101 69.3
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.7e-29 133.3 100 70.0
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 1.7e-29 133.3 101 69.3
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.7e-29 133.3 103 68.0
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.2e-29 132.9 101 67.3
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 2.2e-29 132.9 101 67.3
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 2.2e-29 132.9 101 67.3
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 2.2e-29 132.9 101 68.3
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 2.8e-29 132.5 101 67.3
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 2.8e-29 132.5 98 71.4
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 2.8e-29 132.5 99 66.7
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.8e-29 132.5 103 68.9
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 3.7e-29 132.1 101 68.3
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 4.8e-29 131.7 101 67.3
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 4.8e-29 131.7 103 70.9
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 1.1e-28 130.6 99 67.7
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.1e-28 130.6 101 67.3
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.8e-28 129.8 101 66.3
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.8e-28 129.8 99 66.7
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 1.8e-28 129.8 105 70.5
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 2.4e-28 129.4 99 66.7
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.4e-28 129.4 101 68.3
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 3.1e-28 129.0 101 65.3
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 3.1e-28 129.0 99 66.7
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 3.1e-28 129.0 99 66.7
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 3.1e-28 129.0 101 66.3
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 3.1e-28 129.0 101 65.3
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 3.1e-28 129.0 87 72.4
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 4.1e-28 128.6 102 66.7
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 4.1e-28 128.6 99 65.7
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 5.3e-28 128.3 101 67.3
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 5.3e-28 128.3 101 68.3
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 5.3e-28 128.3 101 68.3
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 2.0e-27 126.3 95 67.4
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.4e-27 125.6 103 66.0
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 5.9e-27 124.8 113 60.2
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 1.0e-26 124.0 101 64.4
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.3e-26 123.6 89 71.9
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.9e-26 122.5 101 61.4
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 2.9e-26 122.5 101 65.3
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 3.8e-26 122.1 88 71.6
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.1e-25 120.6 98 63.3
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 3.9e-23 112.1 88 65.9
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 2.2e-21 106.3 82 65.9
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 2.8e-21 105.9 99 55.6
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 6.1e-16 88.2 62 74.2
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 5.7e-14 81.6 97 50.5
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 6.3e-13 78.2 52 75.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.1e-09 67.4 40 80.0
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 2.5e-09 66.2 38 78.9
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 4.0e-07 58.9 36 77.8


User provided reference genes

Program Settings