Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010444001 Vitis vinifera HOM05D009245 ORTHO05D011414 2.0e-45 185.3 87 100.0
CiPaw.06G101300 Carya illinoinensis HOM05D009245 ORTHO05D011414 8.6e-28 126.7 82 74.4
Dinv10969 Davidia involucrata HOM05D009245 ORTHO05D011414 3.6e-26 121.3 84 69.0
Manes.12G012951 Manihot esculenta HOM05D009245 ORTHO05D011414 4.7e-26 120.9 82 69.5
CiPaw.05G111800 Carya illinoinensis HOM05D009245 ORTHO05D011414 1.4e-25 119.4 82 72.0
CSS0013160 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 4.0e-25 117.9 84 67.9
CSS0041114 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 4.0e-25 117.9 84 67.9
Glyma.08G103500 Glycine max HOM05D009245 ORTHO05D011414 3.7e-23 111.3 82 63.4
Glyma.11G249400 Glycine max HOM05D009245 ORTHO05D011414 1.1e-22 109.8 82 62.2
Thecc.02G212200 Theobroma cacao HOM05D009245 ORTHO05D011414 1.1e-22 109.8 82 62.2
Atru.chr11.2306 Acer truncatum HOM05D009245 ORTHO05D011414 2.7e-21 105.1 82 65.9
arahy.Tifrunner.gnm1.ann1.6N96FM Arachis hypogaea HOM05D009245 ORTHO05D011414 6.0e-21 104.0 83 57.8
Gohir.A01G155200 Gossypium hirsutum HOM05D009245 ORTHO05D011414 1.7e-20 102.4 82 61.0
CSS0003449 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 8.6e-20 100.1 84 61.9
Glyma.18G008000 Glycine max HOM05D009245 ORTHO05D011414 8.6e-20 100.1 82 59.8
Gohir.D01G154750 Gossypium hirsutum HOM05D009245 ORTHO05D011414 1.1e-19 99.8 82 59.8
Manes.13G018350 Manihot esculenta HOM05D009245 ORTHO05D011414 1.1e-19 99.8 82 59.8
Potri.013G104350 Populus trichocarpa HOM05D009245 ORTHO05D011414 1.9e-19 99.0 82 61.0
Cc11_g16810 Coffea canephora HOM05D009245 ORTHO05D011414 2.1e-18 95.5 83 57.8
Lalb_Chr11g0075731 Lupinus albus HOM05D009245 ORTHO05D011414 6.8e-17 90.5 82 51.2
Prupe.1G228500 Prunus persica HOM05D009245 ORTHO05D011414 6.8e-17 90.5 79 58.2
ClCG08G010130 Citrullus lanatus HOM05D009245 ORTHO05D011414 1.5e-16 89.4 82 58.5
Phvul.002G174500 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 5.8e-16 87.4 82 51.2
Phvul.001G260700 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 7.6e-16 87.0 84 57.1
Migut.K00714 Erythranthe guttata HOM05D009245 ORTHO05D011414 9.9e-16 86.7 84 51.2
Actinidia20700 Actinidia chinensis HOM05D009245 ORTHO05D011414 3.8e-15 84.7 78 55.1
CsaV3_6G032310 Cucumis sativus L. HOM05D009245 ORTHO05D011414 4.9e-15 84.3 82 54.9
Potri.008G175950 Populus trichocarpa HOM05D009245 ORTHO05D011414 1.4e-14 82.8 82 57.3
Lj4g0004409 Lotus japonicus HOM05D009245 ORTHO05D011414 1.9e-14 82.4 82 48.8
Psat5g094920 Pisum sativum HOM05D000667 ORTHO05D003843 1.6e-13 79.3 71 56.3
TAR629G3142 Trochodendron aralioides HOM05D009245 ORTHO05D011414 3.5e-13 78.2 78 53.8
EL10Ac6g13482 Beta vulgaris HOM05D009245 ORTHO05D011414 2.5e-11 72.0 84 50.0
TPR.G17065 Trifolium pratense HOM05D009245 ORTHO05D011414 7.3e-11 70.5 67 53.7
Lj3A1066T76 Lonicera japonica HOM05D000667 ORTHO05D003843 1.5e-08 62.8 81 43.2
CAN.G550.3 Capsicum annuum HOM05D009245 ORTHO05D011414 2.9e-07 58.5 82 39.0


User provided reference genes

Program Settings