Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010391001 Vitis vinifera HOM05D000071 ORTHO05D438602 8.1e-120 434.9 476 100.0
Ciclev10014246m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.8e-11 74.3 98 48.0
COL.COLO4_25040 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.2e-09 68.9 98 43.9
Thecc.02G002400 Theobroma cacao HOM05D000071 ORTHO05D000029 1.2e-09 68.9 98 44.9
Gohir.D12G048600 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.6e-09 67.8 98 43.9
Gorai.008G051600 Gossypium raimondii HOM05D000071 ORTHO05D000029 2.6e-09 67.8 98 43.9
Haze_05854 Corylus avellana HOM05D000071 ORTHO05D000029 4.4e-09 67.0 99 41.4
HanXRQChr14g0426761 Helianthus annuus HOM05D000071 ORTHO05D000029 5.8e-09 66.6 95 47.4
Thecc.02G277800 Theobroma cacao HOM05D000071 ORTHO05D000029 5.8e-09 66.6 99 44.4
HanXRQChr14g0426801 Helianthus annuus HOM05D000071 ORTHO05D000029 7.6e-09 66.2 95 46.3
HanXRQChr04g0099371 Helianthus annuus HOM05D000071 ORTHO05D000029 9.9e-09 65.9 95 46.3
HanXRQChr14g0426711 Helianthus annuus HOM05D000071 ORTHO05D000029 9.9e-09 65.9 95 47.4
CSS0019293 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.3e-08 65.5 99 42.4
CSS0047299 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.3e-08 65.5 99 42.4
COL.COLO4_20374 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.3e-08 65.5 98 41.8
Lj6g0013337 Lotus japonicus HOM05D000071 ORTHO05D000029 1.7e-08 65.1 91 46.2
QL05p008200 Quercus lobata HOM05D000071 ORTHO05D000029 1.7e-08 65.1 98 43.9
GSVIVG01010394001 Vitis vinifera HOM05D000446 ORTHO05D000029 1.7e-08 65.1 50 64.0
CSS0017287 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.2e-08 64.7 99 42.4
CSS0049713 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.2e-08 64.7 99 42.4
DCAR_030240 Daucus carota HOM05D000071 ORTHO05D000029 2.2e-08 64.7 98 45.9
Dinv24270 Davidia involucrata HOM05D000071 ORTHO05D000029 2.2e-08 64.7 99 39.4
Gohir.A12G050300 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.2e-08 64.7 92 44.6
Dinv24274 Davidia involucrata HOM05D000071 ORTHO05D000029 2.9e-08 64.3 99 38.4
HanXRQChr04g0099731 Helianthus annuus HOM05D000071 ORTHO05D000029 2.9e-08 64.3 95 46.3
MBI18_g13980_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 2.9e-08 64.3 101 44.6
QL05p023777 Quercus lobata HOM05D000071 ORTHO05D000029 2.9e-08 64.3 53 62.3
QL05p023979 Quercus lobata HOM05D000071 ORTHO05D000029 2.9e-08 64.3 53 62.3
Thecc.02G277200 Theobroma cacao HOM05D000071 ORTHO05D000029 2.9e-08 64.3 227 28.6
HanXRQChr04g0099441 Helianthus annuus HOM05D000071 ORTHO05D000029 3.8e-08 63.9 95 45.3
HanXRQChr14g0426741 Helianthus annuus HOM05D000071 ORTHO05D000029 3.8e-08 63.9 95 45.3
TPR.G4462 Trifolium pratense HOM05D000071 ORTHO05D000029 3.8e-08 63.9 145 35.9
Medtr2g017420 Medicago truncatula HOM05D000071 ORTHO05D000029 4.9e-08 63.5 100 41.0
QL03p054080 Quercus lobata HOM05D000071 ORTHO05D000029 4.9e-08 63.5 99 43.4
Atru.chr10.262 Acer truncatum HOM05D000071 ORTHO05D000029 6.4e-08 63.2 98 43.9
FvH4_4g32560 Fragaria vesca HOM05D000071 ORTHO05D000029 6.4e-08 63.2 61 54.1
Haze_05211 Corylus avellana HOM05D000071 ORTHO05D000029 8.4e-08 62.8 95 38.9
Eucgr.B03475 Eucalyptus grandis HOM05D000071 ORTHO05D000029 8.4e-08 62.8 98 44.9
Medtr2g017480 Medicago truncatula HOM05D000071 ORTHO05D000029 8.4e-08 62.8 100 45.0
QL05p024087 Quercus lobata HOM05D000071 ORTHO05D000029 8.4e-08 62.8 53 60.4
MBI19_g35953_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 1.1e-07 62.4 98 39.8
QL04p017031 Quercus lobata HOM05D000071 ORTHO05D000029 1.1e-07 62.4 107 42.1
MBI18_g02451_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 1.4e-07 62.0 98 42.9
QL05p024177 Quercus lobata HOM05D000071 ORTHO05D000029 1.4e-07 62.0 90 43.3
Atru.chr6.2539 Acer truncatum HOM05D000071 ORTHO05D000029 1.9e-07 61.6 53 64.2
Atru.chr6.2544 Acer truncatum HOM05D000071 ORTHO05D000029 1.9e-07 61.6 53 64.2
CSS0025098 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.9e-07 61.6 104 41.3
CSS0040382 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.9e-07 61.6 98 40.8
CSS0046869 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.9e-07 61.6 104 41.3
Dinv10971 Davidia involucrata HOM05D000071 ORTHO05D000029 1.9e-07 61.6 130 36.2
Medtr2g017470 Medicago truncatula HOM05D000071 ORTHO05D000029 1.9e-07 61.6 144 34.7
Prupe.3G304400 Prunus persica HOM05D000071 ORTHO05D000029 1.9e-07 61.6 98 39.8
VMungo0720G1611 Vigna mungo HOM05D000071 ORTHO05D000029 1.9e-07 61.6 99 46.5
HanXRQChr04g0099431 Helianthus annuus HOM05D000071 ORTHO05D000029 2.4e-07 61.2 95 45.3
Hma1.2p1_1278F.1_g272380 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 3.2e-07 60.8 53 58.5
Migut.K01457 Erythranthe guttata HOM05D000071 ORTHO05D000029 4.1e-07 60.5 53 54.7
FAN06G3346 Fragaria x ananassa HOM05D000071 ORTHO05D000029 4.1e-07 60.5 94 43.6
HanXRQChr14g0426821 Helianthus annuus HOM05D000071 ORTHO05D000029 4.1e-07 60.5 95 44.2
HanXRQChr14g0426831 Helianthus annuus HOM05D000071 ORTHO05D000029 4.1e-07 60.5 95 44.2
Hma1.2p1_1278F.1_g272390 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 4.1e-07 60.5 53 60.4
QL04p016837 Quercus lobata HOM05D000071 ORTHO05D000029 4.1e-07 60.5 99 43.4
QL04p016863 Quercus lobata HOM05D000071 ORTHO05D000029 4.1e-07 60.5 99 43.4
QL04p017308 Quercus lobata HOM05D000071 ORTHO05D000029 4.1e-07 60.5 99 43.4
Eucgr.B03474 Eucalyptus grandis HOM05D000071 ORTHO05D000029 5.4e-07 60.1 80 47.5
arahy.Tifrunner.gnm1.ann1.Q6J9W3 Arachis hypogaea HOM05D000071 ORTHO05D000029 7.1e-07 59.7 99 38.4
CANSAT64G2047 Cannabis sativa HOM05D000071 ORTHO05D000029 7.1e-07 59.7 53 56.6
HanXRQChr04g0099761 Helianthus annuus HOM05D000071 ORTHO05D000029 7.1e-07 59.7 95 45.3
QL03p053822 Quercus lobata HOM05D000071 ORTHO05D000029 7.1e-07 59.7 50 58.0
Thecc.04G034100 Theobroma cacao HOM05D000071 ORTHO05D000029 7.1e-07 59.7 56 53.6
Dinv24273 Davidia involucrata HOM05D000071 ORTHO05D000029 9.2e-07 59.3 91 39.6
Dinv32122 Davidia involucrata HOM05D000071 ORTHO05D000029 9.2e-07 59.3 103 37.9
QL04p016935 Quercus lobata HOM05D000071 ORTHO05D000029 9.2e-07 59.3 94 45.7
QL05p023880 Quercus lobata HOM05D000071 ORTHO05D000029 9.2e-07 59.3 53 58.5
CSS0021909 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.2e-06 58.9 217 28.1
COL.COLO4_20365 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.2e-06 58.9 103 41.7
Eucgr.B03476 Eucalyptus grandis HOM05D000071 ORTHO05D000029 1.2e-06 58.9 80 46.2
Lj1C490T1 Lonicera japonica HOM05D000071 ORTHO05D000029 1.2e-06 58.9 98 44.9
QL11p011800 Quercus lobata HOM05D000071 ORTHO05D000029 1.2e-06 58.9 54 53.7
Ciclev10033325m.g Citrus clementina HOM05D000071 ORTHO05D000029 1.6e-06 58.5 96 39.6
Dinv25666 Davidia involucrata HOM05D000071 ORTHO05D000029 1.6e-06 58.5 53 58.5
Manes.07G042900 Manihot esculenta HOM05D000071 ORTHO05D000029 1.6e-06 58.5 99 38.4
Prupe.4G117000 Prunus persica HOM05D000071 ORTHO05D000029 1.6e-06 58.5 94 41.5
RcHm_v2.0_Chr5g0021931 Rosa chinensis HOM05D000071 ORTHO05D000029 1.6e-06 58.5 128 37.5
Dinv05738 Davidia involucrata HOM05D000071 ORTHO05D000029 2.1e-06 58.2 53 58.5
Eucgr.B03478 Eucalyptus grandis HOM05D000071 ORTHO05D000029 2.1e-06 58.2 98 42.9
Gorai.011G179600 Gossypium raimondii HOM05D000071 ORTHO05D000029 2.1e-06 58.2 102 40.2
Lj1P511T3 Lonicera japonica HOM05D000071 ORTHO05D000029 2.1e-06 58.2 99 42.4
CSS0006363 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.7e-06 57.8 97 41.2
COL.COLO4_20701 Corchorus olitorius HOM05D000071 ORTHO05D000029 2.7e-06 57.8 147 32.7
Haze_05213 Corylus avellana HOM05D000071 ORTHO05D000029 2.7e-06 57.8 97 41.2
Manes.07G052600 Manihot esculenta HOM05D000071 ORTHO05D000029 2.7e-06 57.8 83 44.6
Potri.003G196832 Populus trichocarpa HOM05D000071 ORTHO05D000029 2.7e-06 57.8 98 42.9
QL05p023568 Quercus lobata HOM05D000071 ORTHO05D000029 2.7e-06 57.8 85 41.2
Lj1A496T19 Lonicera japonica HOM05D000071 ORTHO05D000029 3.5e-06 57.4 99 42.4
QL05p023971 Quercus lobata HOM05D000071 ORTHO05D000029 3.5e-06 57.4 66 48.5
TPR.G4580 Trifolium pratense HOM05D000071 ORTHO05D000029 3.5e-06 57.4 144 34.0
CSS0031280 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.6e-06 57.0 99 37.4
Cpa.g.sc171.28 Carica papaya HOM05D000071 ORTHO05D000029 4.6e-06 57.0 53 58.5
COL.COLO4_20367 Corchorus olitorius HOM05D000071 ORTHO05D000029 4.6e-06 57.0 52 53.8
Manes.04G014301 Manihot esculenta HOM05D000071 ORTHO05D000029 4.6e-06 57.0 53 54.7
Manes.12G001300 Manihot esculenta HOM05D000071 ORTHO05D000029 4.6e-06 57.0 133 35.3
QL03p032782 Quercus lobata HOM05D000071 ORTHO05D000029 4.6e-06 57.0 99 41.4
QL05p023479 Quercus lobata HOM05D000071 ORTHO05D000029 4.6e-06 57.0 102 37.3
arahy.Tifrunner.gnm1.ann1.61Q21E Arachis hypogaea HOM05D000071 ORTHO05D000029 6.0e-06 56.6 98 41.8
CiPaw.09G120300 Carya illinoinensis HOM05D000071 ORTHO05D000029 6.0e-06 56.6 116 40.5
HanXRQChr10g0317241 Helianthus annuus HOM05D000071 ORTHO05D000029 6.0e-06 56.6 77 45.5
MD17G1013200 Malus domestica HOM05D000071 ORTHO05D000029 6.0e-06 56.6 53 56.6
TAR627G0622 Trochodendron aralioides HOM05D000071 ORTHO05D000029 6.0e-06 56.6 49 61.2
CSS0004324 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 7.8e-06 56.2 104 39.4
Dinv06390 Davidia involucrata HOM05D000071 ORTHO05D000029 7.8e-06 56.2 108 44.4
QL03p053955 Quercus lobata HOM05D000071 ORTHO05D000029 7.8e-06 56.2 99 40.4
QL05p014991 Quercus lobata HOM05D000071 ORTHO05D000029 7.8e-06 56.2 99 37.4
RcHm_v2.0_Chr5g0015191 Rosa chinensis HOM05D000071 ORTHO05D000029 7.8e-06 56.2 100 41.0
TAR374G1085 Trochodendron aralioides HOM05D000071 ORTHO05D000029 7.8e-06 56.2 91 41.8


User provided reference genes

Program Settings