Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 2.6e-53 211.8 109 100.0
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 2.6e-42 175.3 107 80.4
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 8.5e-41 170.2 105 81.0
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.5e-40 169.5 109 78.0
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 7.2e-40 167.2 109 75.2
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 1.6e-39 166.0 109 76.1
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 8.0e-39 163.7 105 76.2
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 1.4e-38 162.9 113 74.3
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 1.4e-38 162.9 102 79.4
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 1.4e-38 162.9 102 77.5
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.8e-38 162.5 105 73.3
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.8e-38 162.5 105 78.1
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 8.8e-38 160.2 109 71.6
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 8.8e-38 160.2 109 73.4
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 1.2e-37 159.8 102 76.5
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 1.5e-37 159.5 109 73.4
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 1.5e-37 159.5 109 73.4
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 1.5e-37 159.5 109 73.4
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 2.0e-37 159.1 111 74.8
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 2.0e-37 159.1 109 72.5
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 2.0e-37 159.1 105 75.2
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 3.3e-37 158.3 109 73.4
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 4.4e-37 157.9 102 73.5
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 4.4e-37 157.9 109 71.6
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 4.4e-37 157.9 109 72.5
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 9.7e-37 156.8 109 72.5
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 1.3e-36 156.4 102 73.5
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 1.3e-36 156.4 109 71.6
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 1.7e-36 156.0 105 73.3
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 2.2e-36 155.6 106 72.6
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 2.8e-36 155.2 102 74.5
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 2.8e-36 155.2 102 72.5
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 2.8e-36 155.2 102 74.5
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 3.7e-36 154.8 109 71.6
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 3.7e-36 154.8 109 71.6
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 4.8e-36 154.5 103 74.8
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 4.8e-36 154.5 102 72.5
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 4.8e-36 154.5 106 71.7
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 8.2e-36 153.7 108 75.0
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 8.2e-36 153.7 108 75.0
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.1e-35 153.3 109 68.8
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 1.4e-35 152.9 109 69.7
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 1.8e-35 152.5 111 71.2
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 4.1e-35 151.4 112 67.0
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.2e-34 149.8 102 68.6
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.2e-34 149.8 114 67.5
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 2.0e-34 149.1 106 69.8
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 2.0e-34 149.1 146 56.8
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 2.0e-34 149.1 112 65.2
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 5.9e-34 147.5 105 67.6
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 7.7e-34 147.1 114 66.7
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 7.7e-34 147.1 81 84.0
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 1.3e-33 146.4 106 64.2
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 1.3e-33 146.4 106 65.1
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 2.9e-33 145.2 105 65.7
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 3.8e-33 144.8 102 67.6
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 8.5e-33 143.7 102 67.6
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.1e-32 143.3 109 67.9
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 1.9e-32 142.5 106 61.3
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 1.9e-32 142.5 113 62.8
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 2.5e-32 142.1 105 63.8
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 3.2e-32 141.7 101 65.3
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 3.2e-32 141.7 141 56.7
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 5.5e-32 141.0 124 61.3
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 9.4e-32 140.2 83 81.9
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 9.4e-32 140.2 103 66.0
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 1.2e-31 139.8 101 64.4
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 6.1e-31 137.5 143 52.4
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 1.0e-30 136.7 90 73.3
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 1.0e-30 136.7 93 68.8
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 1.4e-30 136.3 122 60.7
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 2.3e-30 135.6 101 65.3
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 3.0e-30 135.2 102 65.7
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 5.2e-30 134.4 88 71.6
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 8.8e-30 133.7 111 62.2
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.2e-29 133.3 86 72.1
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 1.2e-29 133.3 111 62.2
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 1.5e-29 132.9 111 62.2
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 2.6e-29 132.1 111 61.3
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 2.6e-29 132.1 111 61.3
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 3.4e-29 131.7 110 60.9
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 3.4e-29 131.7 110 60.9
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 3.4e-29 131.7 82 74.4
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 2.2e-28 129.0 112 58.9
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 7.0e-27 124.0 110 61.8
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 9.1e-27 123.6 88 68.2
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 1.6e-26 122.9 112 60.7
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 1.0e-25 120.2 83 63.9
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 5.5e-24 114.4 89 62.9
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 2.8e-23 112.1 86 66.3
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 6.1e-23 110.9 72 73.6
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 1.4e-22 109.8 58 86.2
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 9.8e-21 103.6 83 62.7
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 1.4e-19 99.8 71 67.6
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 5.9e-18 94.4 68 60.3
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 5.9e-18 94.4 68 60.3
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 1.7e-17 92.8 73 67.1
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 1.7e-17 92.8 52 80.8
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 9.5e-16 87.0 51 74.5
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 1.2e-13 80.1 52 73.1
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 2.0e-13 79.3 51 72.5
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 2.6e-13 79.0 52 71.2
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 3.4e-13 78.6 52 71.2
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.9e-12 75.5 83 51.8
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 3.2e-11 72.0 73 42.5
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 7.0e-11 70.9 56 66.1
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 2.0e-10 69.3 48 68.8
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 4.6e-10 68.2 73 37.0
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 6.0e-10 67.8 60 60.0
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 7.8e-10 67.4 80 33.8
arahy.Tifrunner.gnm1.ann1.02S1KF Arachis hypogaea HOM05D003716 ORTHO05D010944 3.1e-06 55.5 32 75.0


User provided reference genes

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