Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.2e-199 698.7 351 100.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 4.7e-109 398.7 317 66.9
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 7.1e-105 384.8 323 62.5
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.6e-104 383.6 295 66.1
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.3e-103 379.8 291 68.0
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 7.3e-102 374.8 290 68.6
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 6.2e-101 371.7 324 63.6
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 4.0e-100 369.0 294 66.3
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 4.0e-100 369.0 315 61.9
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.5e-99 367.1 297 65.3
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 2.1e-96 356.7 312 60.6
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 7.8e-96 354.8 319 60.5
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.0e-95 354.4 302 61.3
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.3e-95 354.0 303 63.0
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 3.9e-95 352.4 302 61.3
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 6.6e-95 351.7 314 61.5
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 5.6e-94 348.6 288 60.4
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 9.6e-94 347.8 307 61.2
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.6e-93 347.1 290 64.5
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 2.1e-93 346.7 265 66.8
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.8e-92 343.6 300 60.7
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 5.3e-92 342.0 256 67.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 9.0e-92 341.3 280 64.6
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 2.6e-91 339.7 296 60.1
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 7.6e-91 338.2 319 58.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.9e-89 333.6 310 57.4
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.9e-89 333.6 289 61.6
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 9.3e-89 331.3 293 59.4
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 2.7e-88 329.7 268 63.1
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 3.5e-88 329.3 203 77.8
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 1.0e-87 327.8 217 75.6
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 1.0e-87 327.8 295 60.3
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 3.0e-87 326.2 268 62.7
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 6.7e-87 325.1 217 72.4
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 8.7e-87 324.7 313 59.4
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 2.5e-86 323.2 267 62.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.5e-86 323.2 223 73.1
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 5.6e-86 322.0 269 62.8
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 1.6e-85 320.5 339 55.2
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 1.1e-84 317.8 256 65.2
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.1e-84 317.8 267 62.5
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.1e-84 317.8 281 61.9
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 6.9e-84 315.1 288 61.8
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 1.2e-83 314.3 269 61.0
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 2.6e-83 313.2 218 72.0
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 5.8e-83 312.0 274 60.6
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 5.8e-83 312.0 224 70.1
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.4e-81 307.4 264 61.7
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 4.2e-81 305.8 299 55.2
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 7.1e-81 305.1 315 54.9
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 1.6e-80 303.9 226 66.4
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 2.7e-80 303.1 286 56.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.5e-80 302.8 287 55.4
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.3e-79 300.8 276 59.1
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 2.3e-79 300.1 275 56.4
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 3.0e-79 299.7 267 58.1
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.1e-78 297.7 262 57.3
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.5e-78 296.6 244 64.3
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 4.3e-78 295.8 269 58.7
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 9.6e-78 294.7 262 56.9
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.6e-77 293.9 189 78.3
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.6e-77 293.9 262 56.5
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.1e-77 293.5 189 77.8
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.8e-77 293.1 262 58.4
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.8e-77 293.1 262 58.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.7e-77 292.7 262 56.1
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 6.2e-77 292.0 257 61.1
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.1e-76 291.2 262 58.8
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.4e-76 290.8 262 58.8
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 1.5e-75 287.3 205 70.2
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.1e-73 281.2 265 57.0
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.1e-73 281.2 319 51.7
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 5.5e-73 278.9 261 60.2
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.3e-71 273.5 267 54.7
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 1.5e-70 270.8 356 46.9
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 4.3e-70 269.2 227 64.8
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 9.7e-70 268.1 218 62.4
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 2.8e-69 266.5 269 53.2
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 8.2e-69 265.0 410 41.5
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 1.8e-68 263.8 262 53.1
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 2.6e-67 260.0 260 52.7
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.3e-66 257.7 254 53.9
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.9e-65 253.8 228 59.2
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 9.4e-65 251.5 222 61.7
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.1e-56 223.8 274 47.4
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 1.8e-55 220.7 142 72.5
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 1.6e-48 197.6 237 42.6
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 8.0e-48 195.3 182 59.9
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 6.7e-47 192.2 274 39.8
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 1.3e-42 177.9 239 43.1
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 4.2e-41 172.9 259 39.0
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.5e-38 164.5 95 78.9
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 3.7e-37 159.8 192 48.4
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.8e-36 157.5 128 61.7
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 2.7e-35 153.7 212 47.2
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.6e-32 144.4 204 46.1
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 7.5e-30 135.6 163 46.0
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 5.9e-27 125.9 246 34.6
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 3.0e-23 113.6 192 34.9
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 5.7e-22 109.4 200 36.5
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 5.4e-20 102.8 132 51.5
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 1.0e-18 98.6 62 75.8
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 1.0e-18 98.6 117 41.0
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 3.9e-18 96.7 90 53.3
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.6e-16 90.1 125 49.6
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.6e-16 90.1 125 49.6


User provided reference genes

Program Settings