Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 0.0e+00 1204.1 697 100.0
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.7e-198 695.7 676 66.0
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 4.9e-198 695.3 689 66.6
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.2e-193 680.6 684 65.5
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 4.4e-191 672.2 681 63.7
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 9.8e-191 671.0 681 63.3
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.2e-185 654.1 676 63.0
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.6e-185 653.7 676 63.3
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 2.8e-185 652.9 772 58.5
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 1.8e-184 650.2 681 63.7
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 4.9e-182 642.1 676 61.4
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.9e-181 640.2 676 62.0
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.9e-181 640.2 676 62.0
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 8.1e-177 624.8 682 61.6
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.5e-175 620.5 679 62.0
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.4e-175 619.4 676 62.0
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 5.8e-175 618.6 682 60.7
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 5.4e-173 612.1 637 62.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 3.4e-167 592.8 747 46.9
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 7.6e-167 591.7 677 58.6
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.3e-166 590.9 684 60.8
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 8.4e-166 588.2 648 61.1
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 7.3e-162 575.1 718 55.2
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.8e-161 572.4 679 59.5
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 2.4e-160 570.1 640 62.2
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 9.0e-160 568.2 638 61.6
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 4.5e-159 565.8 679 57.7
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.3e-153 547.7 679 57.9
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.6e-153 547.4 682 55.7
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 5.8e-151 538.9 691 56.0
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 2.2e-150 537.0 661 58.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 6.4e-150 535.4 733 55.3
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 8.4e-150 535.0 680 57.8
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 3.2e-149 533.1 566 52.7
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 9.3e-149 531.6 681 56.4
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 4.6e-148 529.3 681 56.5
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 6.0e-148 528.9 683 57.4
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 7.9e-148 528.5 681 54.2
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.0e-147 528.1 681 54.6
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 1.1e-146 524.6 710 54.9
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.5e-146 523.5 683 55.6
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 2.8e-145 520.0 680 55.7
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.6e-143 513.5 690 51.9
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 3.4e-143 513.1 680 56.6
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.2e-141 506.5 679 53.8
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 7.1e-141 505.4 568 52.3
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 2.7e-140 503.4 676 56.7
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 4.6e-140 502.7 470 55.7
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 2.5e-138 496.9 676 54.3
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 3.7e-137 493.0 552 64.3
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 9.0e-136 488.4 674 54.2
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.2e-135 488.0 676 52.5
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 5.9e-135 485.7 643 46.8
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 6.5e-134 482.3 674 53.9
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 3.2e-133 479.9 666 53.2
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 5.5e-133 479.2 681 53.6
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 6.1e-132 475.7 683 51.2
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.2e-126 457.2 582 45.9
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 3.0e-123 446.8 685 50.9
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 6.7e-123 445.7 729 48.4
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.6e-122 443.7 666 52.3
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 5.7e-122 442.6 657 52.2
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 7.4e-122 442.2 572 57.7
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 4.8e-121 439.5 488 51.0
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 5.3e-120 436.0 666 52.1
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 1.5e-119 434.5 678 50.6
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 2.6e-119 433.7 585 42.7
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 2.6e-119 433.7 696 48.9
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 5.9e-119 432.6 644 53.0
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.7e-118 431.0 674 50.7
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 5.0e-118 429.5 666 50.0
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 6.5e-118 429.1 639 53.4
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 2.5e-117 427.2 638 49.5
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 4.2e-117 426.4 683 50.1
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 9.4e-117 425.2 665 50.4
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 1.6e-116 424.5 685 48.6
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 8.2e-113 412.1 666 49.5
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 5.3e-112 409.5 664 51.1
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 4.5e-111 406.4 638 50.9
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 7.7e-111 405.6 665 51.0
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 2.7e-108 397.1 552 54.2
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 4.7e-108 396.4 691 49.3
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 5.0e-102 376.3 652 48.9
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 4.4e-98 363.2 574 49.7
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 7.0e-96 355.9 591 50.8
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 2.8e-89 334.0 462 60.2
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 1.3e-86 325.1 566 38.7
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 2.0e-82 311.2 440 56.4
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 5.4e-80 303.1 684 43.1
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.4e-75 288.5 344 49.4
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.1e-75 287.3 235 60.0
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 1.6e-68 265.0 621 36.6
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.0e-66 258.1 675 38.4
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 6.2e-60 236.5 416 52.4
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 2.2e-57 228.0 512 33.8
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.7e-54 218.4 176 65.9
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.6e-52 211.8 469 33.9
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 3.8e-49 200.7 568 30.5
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.0e-46 192.6 233 50.2
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 2.6e-42 177.9 165 57.0
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.9e-33 147.9 299 35.8
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 8.4e-33 146.4 202 45.5
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 2.5e-29 134.8 240 35.8
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 9.3e-24 116.3 208 38.5
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 5.7e-21 107.1 121 49.6
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 6.3e-20 103.6 266 30.5
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.1e-19 102.8 78 66.7
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 9.4e-16 89.7 81 59.3
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.1e-13 82.8 46 78.3
Medtr3g055590 Medicago truncatula HOM05D001616 ORTHO05D004707 3.0e-06 58.2 116 31.9
Actinidia37475 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.9e-06 57.8 29 82.8


User provided reference genes

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