Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 7.1e-113 410.6 208 100.0
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.9e-53 212.6 222 55.0
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 8.3e-53 211.1 210 59.0
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.9e-50 202.2 215 55.3
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.9e-49 199.9 129 77.5
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 4.3e-49 198.7 161 67.1
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 7.3e-49 198.0 123 80.5
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 4.7e-48 195.3 162 66.7
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 6.2e-48 194.9 183 62.8
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 8.0e-48 194.5 154 64.9
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 8.0e-48 194.5 154 64.9
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 8.0e-48 194.5 112 86.6
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.1e-47 194.1 184 59.2
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.4e-47 193.7 194 59.8
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.4e-47 193.7 159 64.8
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 3.1e-47 192.6 114 84.2
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 4.0e-47 192.2 212 55.7
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 4.0e-47 192.2 159 64.2
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 5.2e-47 191.8 110 88.2
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 6.8e-47 191.4 199 57.8
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 1.2e-46 190.7 183 62.3
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.2e-46 190.7 172 62.2
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 1.5e-46 190.3 115 83.5
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.5e-46 190.3 181 59.1
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 2.0e-46 189.9 111 87.4
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.6e-46 189.5 185 60.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 2.6e-46 189.5 217 55.8
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.6e-46 189.5 113 85.8
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 3.4e-46 189.1 183 58.5
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 7.5e-46 188.0 183 60.7
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 9.8e-46 187.6 112 84.8
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 9.8e-46 187.6 120 78.3
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.3e-45 187.2 177 57.1
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.7e-45 186.8 150 66.0
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.7e-45 186.8 104 85.6
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.7e-45 186.8 191 55.5
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.2e-45 186.4 183 60.7
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.9e-45 186.0 181 58.0
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 2.9e-45 186.0 186 57.5
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 4.9e-45 185.3 179 57.5
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 4.9e-45 185.3 162 61.1
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 6.4e-45 184.9 110 83.6
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 6.4e-45 184.9 110 83.6
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 6.4e-45 184.9 153 66.0
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 6.4e-45 184.9 159 61.0
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 8.3e-45 184.5 110 83.6
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.1e-44 184.1 100 88.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.1e-44 184.1 100 89.0
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.9e-44 183.3 100 90.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 3.2e-44 182.6 112 82.1
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 3.2e-44 182.6 102 87.3
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.2e-44 182.6 163 60.7
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 5.4e-44 181.8 112 81.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.4e-44 181.8 173 60.7
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 7.0e-44 181.4 103 86.4
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 7.0e-44 181.4 102 86.3
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 7.0e-44 181.4 100 90.0
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 9.2e-44 181.0 105 82.9
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 9.2e-44 181.0 103 86.4
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 9.2e-44 181.0 101 89.1
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.2e-43 180.6 102 85.3
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.2e-43 180.6 102 85.3
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.2e-43 180.6 121 77.7
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 1.2e-43 180.6 166 60.2
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.6e-43 180.3 112 80.4
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.1e-43 179.9 104 83.7
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 2.1e-43 179.9 186 56.5
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 2.7e-43 179.5 100 86.0
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.7e-43 179.5 160 60.0
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 3.5e-43 179.1 100 84.0
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 4.6e-43 178.7 110 79.1
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 4.6e-43 178.7 110 79.1
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 4.6e-43 178.7 133 69.2
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 4.6e-43 178.7 133 69.2
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 4.6e-43 178.7 133 69.2
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 4.6e-43 178.7 105 83.8
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 6.0e-43 178.3 102 86.3
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 6.0e-43 178.3 113 79.6
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 6.0e-43 178.3 103 85.4
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 6.0e-43 178.3 103 85.4
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 1.0e-42 177.6 108 82.4
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.3e-42 177.2 102 83.3
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 3.9e-42 175.6 133 68.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 3.9e-42 175.6 105 81.9
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.9e-42 175.6 103 82.5
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 5.1e-42 175.3 157 59.9
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 6.6e-42 174.9 111 78.4
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 6.6e-42 174.9 99 82.8
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 8.6e-42 174.5 121 72.7
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 8.6e-42 174.5 108 79.6
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.5e-41 173.7 133 67.7
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 3.3e-41 172.6 104 80.8
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 5.6e-41 171.8 99 83.8
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.2e-40 170.6 99 82.8
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.8e-40 169.5 111 75.7
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 3.1e-39 166.0 105 77.1
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 5.2e-39 165.2 99 81.8
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 6.8e-39 164.9 111 73.0
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 6.8e-39 164.9 99 79.8
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.3e-37 160.6 105 77.1
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 6.4e-37 158.3 99 75.8
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 3.2e-36 156.0 127 63.0
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.3e-34 149.8 111 65.8
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 3.3e-33 146.0 99 68.7
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.8e-32 142.9 110 63.6
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 7.6e-30 134.8 105 60.0
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 2.2e-29 133.3 82 80.5
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.4e-28 129.8 74 81.1
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 7.1e-28 128.3 71 85.9
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 2.1e-24 116.7 151 47.7
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 6.0e-19 98.6 93 50.5
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 3.9e-18 95.9 56 83.9
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 5.6e-17 92.0 44 93.2
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 9.6e-17 91.3 59 76.3
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 8.1e-16 88.2 74 52.7
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.0e-10 71.2 44 75.0
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.9e-10 69.3 41 73.2


User provided reference genes

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