Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 8.7e-125 450.3 223 100.0
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 2.2e-67 259.6 242 59.5
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 8.3e-67 257.7 235 60.0
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 2.4e-66 256.1 235 60.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 1.0e-64 250.8 234 55.6
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 6.6e-64 248.1 235 55.3
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 5.6e-63 245.0 245 55.1
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 6.2e-62 241.5 225 60.9
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.4e-61 240.4 235 57.4
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 3.1e-61 239.2 245 55.1
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 3.1e-61 239.2 221 54.3
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 8.9e-61 237.7 220 58.2
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.6e-60 236.1 220 57.7
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 7.5e-60 234.6 194 63.9
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 9.8e-60 234.2 235 57.0
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 3.7e-59 232.3 195 60.5
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 3.7e-59 232.3 234 56.8
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 7.0e-58 228.0 248 54.0
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.0e-57 226.5 247 51.8
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 3.0e-56 222.6 190 60.5
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 8.6e-56 221.1 268 49.3
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.1e-55 220.7 212 56.6
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 1.5e-55 220.3 233 51.1
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 3.3e-55 219.2 193 59.6
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 9.5e-55 217.6 193 59.6
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.6e-54 216.9 255 48.6
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 3.6e-54 215.7 233 55.8
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.4e-53 213.8 237 50.6
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 4.0e-53 212.2 203 56.7
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 5.8e-52 208.4 248 49.6
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 5.8e-52 208.4 197 55.8
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 7.5e-52 208.0 247 49.4
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 9.8e-52 207.6 249 45.8
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 6.4e-51 204.9 230 47.8
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 3.2e-50 202.6 232 50.4
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 3.2e-50 202.6 197 52.8
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 5.4e-50 201.8 183 55.7
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 5.4e-50 201.8 183 55.7
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 5.4e-50 201.8 190 56.3
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 1.6e-49 200.3 232 49.6
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 2.1e-49 199.9 180 56.1
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 2.1e-49 199.9 180 56.1
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 3.5e-49 199.1 216 50.5
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 4.6e-49 198.7 233 50.2
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 7.8e-49 198.0 249 46.2
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 3.9e-48 195.7 180 56.7
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 8.6e-48 194.5 195 52.8
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.9e-47 193.4 196 54.1
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 1.2e-46 190.7 227 49.3
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 1.2e-46 190.7 185 53.5
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 3.6e-46 189.1 174 58.6
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 1.1e-45 187.6 172 58.1
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 5.2e-45 185.3 238 44.5
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 6.8e-45 184.9 244 48.4
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 2.6e-44 183.0 173 56.6
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 4.4e-44 182.2 172 55.8
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 7.6e-44 181.4 177 54.2
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 9.9e-44 181.0 167 55.7
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 1.7e-43 180.3 254 46.5
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 3.8e-43 179.1 195 52.8
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 3.8e-43 179.1 124 68.5
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 3.8e-43 179.1 203 48.8
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 3.8e-43 179.1 256 44.9
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 1.4e-42 177.2 179 53.6
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 7.1e-42 174.9 268 43.3
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 3.5e-41 172.6 207 48.3
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 6.0e-41 171.8 217 41.9
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 7.8e-41 171.4 184 50.5
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 1.0e-40 171.0 114 67.5
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 5.6e-39 165.2 252 43.3
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 3.1e-37 159.5 236 44.9
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 2.2e-35 153.3 114 64.9
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 2.4e-34 149.8 131 61.8
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 5.4e-34 148.7 181 46.4
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.7e-33 146.4 142 54.9
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 2.7e-33 146.4 227 38.8
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 3.5e-33 146.0 163 46.6
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 4.3e-31 139.0 145 50.3
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 4.8e-30 135.6 217 37.8
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 3.1e-29 132.9 211 37.0
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 5.3e-29 132.1 125 60.0
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 1.5e-28 130.6 97 63.9
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 5.8e-28 128.6 220 40.5
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.7e-27 127.1 89 67.4
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 3.8e-27 125.9 131 52.7
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 1.6e-25 120.6 125 46.4
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 2.8e-22 109.8 156 42.9
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 8.1e-22 108.2 103 54.4
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 1.1e-21 107.8 75 68.0
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.4e-21 107.5 103 54.4
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.0e-16 91.3 95 51.6
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 4.3e-15 85.9 223 27.4
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 4.5e-12 75.9 76 52.6
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 8.4e-11 71.6 118 43.2
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 3.9e-08 62.8 61 55.7


User provided reference genes

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