Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 7.3e-203 710.3 346 100.0
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 3.4e-168 595.1 346 82.4
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 4.9e-167 591.3 345 79.7
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 3.0e-164 582.0 347 79.0
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 6.6e-164 580.9 345 78.0
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 4.0e-161 571.6 350 79.7
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.2e-160 570.1 348 79.6
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 2.6e-160 568.9 344 79.4
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 5.8e-160 567.8 344 78.5
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 4.9e-159 564.7 344 77.9
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 4.2e-158 561.6 339 78.8
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 4.2e-158 561.6 339 77.3
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 7.1e-158 560.8 346 77.7
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 2.1e-157 559.3 346 77.2
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 2.1e-157 559.3 346 78.0
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 7.9e-157 557.4 345 76.5
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.8e-156 556.2 345 75.7
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.8e-156 556.2 341 77.7
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.8e-156 556.2 341 77.4
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.9e-156 555.1 345 75.4
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 5.1e-156 554.7 343 76.4
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 6.7e-156 554.3 341 76.8
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 8.7e-156 553.9 346 75.7
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.1e-155 553.5 342 77.5
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.1e-155 553.5 347 77.2
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 1.9e-155 552.7 343 76.1
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.6e-155 551.2 345 75.1
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 7.4e-155 550.8 344 75.6
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 1.6e-154 549.7 343 76.7
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 2.1e-154 549.3 339 74.6
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 2.1e-154 549.3 345 77.1
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.1e-154 549.3 346 75.7
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 2.8e-154 548.9 343 77.8
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 8.1e-154 547.4 369 73.4
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 8.1e-154 547.4 344 75.0
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 1.1e-153 547.0 348 74.4
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.4e-153 546.6 344 75.3
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 1.8e-153 546.2 343 74.6
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 6.9e-153 544.3 345 76.5
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 2.0e-152 542.7 347 74.9
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 5.8e-152 541.2 346 73.7
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 9.9e-152 540.4 337 78.0
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 1.3e-151 540.0 348 75.6
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 1.3e-151 540.0 344 74.7
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 1.3e-151 540.0 337 74.8
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.9e-151 538.9 344 74.4
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 4.9e-151 538.1 348 72.1
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 6.4e-151 537.7 348 76.1
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 8.4e-151 537.3 343 74.3
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 8.4e-151 537.3 346 73.7
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.4e-150 536.6 344 74.1
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 1.4e-150 536.6 348 72.1
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.5e-149 531.9 344 73.3
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 3.5e-149 531.9 346 74.3
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.9e-148 528.5 375 68.8
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 8.7e-148 527.3 343 73.5
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 2.5e-147 525.8 347 72.3
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 5.6e-147 524.6 346 75.1
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 6.2e-146 521.2 349 73.1
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 1.1e-145 520.4 345 70.7
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 1.4e-145 520.0 343 75.2
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 9.0e-145 517.3 341 71.6
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 1.2e-144 516.9 361 70.6
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 4.5e-144 515.0 334 76.0
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 5.8e-144 514.6 341 76.2
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 1.7e-143 513.1 347 73.2
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 4.9e-143 511.5 407 65.1
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.5e-142 509.2 344 72.4
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 2.5e-142 509.2 348 73.0
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 3.2e-142 508.8 352 72.4
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 3.2e-142 508.8 352 72.4
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 4.2e-142 508.4 343 74.9
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 7.1e-142 507.7 352 72.4
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 9.3e-142 507.3 342 71.3
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 1.2e-141 506.9 351 72.1
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.6e-141 506.5 336 71.7
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 3.5e-141 505.4 349 70.2
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 6.0e-141 504.6 350 68.0
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 1.3e-140 503.4 340 70.6
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 3.0e-140 502.3 328 72.9
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 3.9e-140 501.9 327 72.8
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 5.1e-140 501.5 350 67.4
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 4.3e-139 498.4 346 69.7
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 7.4e-139 497.7 340 70.6
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 4.8e-138 495.0 350 69.1
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 1.8e-137 493.0 341 71.0
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 3.1e-137 492.3 349 69.3
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 1.0e-135 487.3 347 68.9
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 1.7e-135 486.5 291 78.7
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.7e-135 486.5 348 69.5
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 3.8e-135 485.3 347 67.4
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 6.5e-135 484.6 347 68.3
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.4e-134 483.4 338 70.4
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.6e-133 479.9 344 66.6
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 2.1e-133 479.6 299 78.3
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 2.7e-133 479.2 323 72.8
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 4.6e-133 478.4 301 76.7
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 4.6e-133 478.4 339 66.1
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 8.8e-132 474.2 347 65.7
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 2.2e-130 469.5 347 66.0
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 3.7e-122 442.2 324 67.6
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 6.3e-122 441.4 337 64.7
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 2.5e-118 429.5 248 83.5
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 2.3e-116 422.9 233 82.0
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 3.0e-116 422.5 244 79.5
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 2.2e-114 416.4 250 74.8
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 9.1e-113 411.0 250 74.4
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 4.8e-106 388.7 324 63.0
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 4.1e-105 385.6 331 60.4
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 5.9e-104 381.7 302 60.9
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 5.7e-99 365.2 238 76.1
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.4e-97 359.8 240 72.5
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 7.0e-97 358.2 332 55.4
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 9.1e-97 357.8 241 71.8
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.6e-96 357.1 241 71.8
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 7.7e-96 354.8 232 73.7
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 8.9e-92 341.3 239 70.3
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.6e-85 320.5 325 52.0
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 1.4e-81 307.4 243 60.1
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 9.9e-67 258.1 173 71.7
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 9.2e-65 251.5 165 72.7
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 2.1e-64 250.4 200 63.0
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.1e-62 244.6 200 62.5
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 1.8e-60 237.3 248 48.8
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 6.2e-53 212.2 199 51.3
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 2.1e-48 197.2 175 57.1
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 3.9e-47 193.0 161 62.7
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.7e-29 133.3 73 87.7
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 3.8e-26 123.2 79 73.4
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 1.3e-18 98.2 57 70.2
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 4.2e-09 66.6 53 60.4


User provided reference genes

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