Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01010032001 Vitis vinifera HOM05D000058 ORTHO05D439185 2.8e-26 120.9 52 100.0
Lj7A364G81 Lonicera japonica HOM05D000058 ORTHO05D000077 8.5e-07 56.2 37 64.9
Hund26729 Selenicereus undatus HOM05D000058 ORTHO05D000077 1.1e-06 55.8 37 67.6
FvH4_2g14630 Fragaria vesca HOM05D000058 ORTHO05D000077 1.5e-06 55.5 37 64.9
Psat6g016000 Pisum sativum HOM05D000058 ORTHO05D000077 1.5e-06 55.5 37 64.9
FAN24G3377 Fragaria x ananassa HOM05D000058 ORTHO05D000077 1.9e-06 55.1 30 76.7
Lalb_Chr23g0271361 Lupinus albus HOM05D000058 ORTHO05D000077 1.9e-06 55.1 37 62.2
Lalb_Chr23g0271481 Lupinus albus HOM05D000058 ORTHO05D000077 1.9e-06 55.1 37 62.2
Medtr5g072570 Medicago truncatula HOM05D000058 ORTHO05D000077 1.9e-06 55.1 37 62.2
QL02p025284 Quercus lobata HOM05D000058 ORTHO05D000077 1.9e-06 55.1 37 62.2
CANSAT25G0761 Cannabis sativa HOM05D000058 ORTHO05D000077 2.5e-06 54.7 37 64.9
CiPaw.15G021300 Carya illinoinensis HOM05D000058 ORTHO05D000077 2.5e-06 54.7 37 64.9
Migut.C01039 Erythranthe guttata HOM05D000058 ORTHO05D000077 2.5e-06 54.7 37 64.9
TAR381G1145 Trochodendron aralioides HOM05D003222 ORTHO05D003706 2.5e-06 54.7 37 64.9
TAR625G0693 Trochodendron aralioides HOM05D000058 ORTHO05D000077 2.5e-06 54.7 37 64.9
Atru.chr13.2267 Acer truncatum HOM05D000058 ORTHO05D000077 3.2e-06 54.3 37 59.5
Eucgr.F02740 Eucalyptus grandis HOM05D000058 ORTHO05D000077 3.2e-06 54.3 37 62.2
Gohir.A05G241700 Gossypium hirsutum HOM05D000058 ORTHO05D000077 3.2e-06 54.3 37 62.2
Gohir.D05G243000 Gossypium hirsutum HOM05D000058 ORTHO05D000077 3.2e-06 54.3 37 62.2
Gorai.009G252300 Gossypium raimondii HOM05D000058 ORTHO05D000077 3.2e-06 54.3 37 62.2
Nn5g28625 Nelumbo nucifera HOM05D000058 ORTHO05D000077 3.2e-06 54.3 37 62.2
Ca_05639_v3 Cicer arietinum L. HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
FAN27G0438 Fragaria x ananassa HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
Glyma.04G240600 Glycine max HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
Glyma.06G122800 Glycine max HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
Hma1.2p1_0107F.1_g051440 Hydrangea macrophylla HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
Manes.02G175300 Manihot esculenta HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
RcHm_v2.0_Chr6g0277101 Rosa chinensis HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
TPR.G29705 Trifolium pratense HOM05D000058 ORTHO05D000077 4.2e-06 53.9 37 62.2
EL10Ac1g01473 Beta vulgaris HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 59.5
EL10Ac1g01475 Beta vulgaris HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 62.2
Cfa018362 Carpinus fangiana HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 64.9
Haze_17712 Corylus avellana HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 64.9
Duzib093G1722 Durio zibethinus HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 62.2
Glyma.14G122200 Glycine max HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 62.2
Phvul.001G073200 Phaseolus vulgaris HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 62.2
TWI60G0220 Tripterygium wilfordii HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 62.2
GSVIVG01010033001 Vitis vinifera HOM05D000058 ORTHO05D000077 5.5e-06 53.5 37 62.2
CSS0007565 Camellia sinensis var. sinensis HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
CSS0011399 Camellia sinensis var. sinensis HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
COL.COLO4_07951 Corchorus olitorius HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
FAN15G1758 Fragaria x ananassa HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
MBI06_g43008_MAGBIO Magnolia biondii HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
MBI06_g43010_MAGBIO Magnolia biondii HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
MD05G1015400 Malus domestica HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
MD10G1015500 Malus domestica HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
Manes.18G087700 Manihot esculenta HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
Oeu000782.1 Olea europaea HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
Thecc.08G144900 Theobroma cacao HOM05D000058 ORTHO05D000077 7.2e-06 53.1 37 62.2
AT2G12480 Arabidopsis thaliana HOM05D000058 ORTHO05D000077 9.5e-06 52.8 37 62.2
MSTRG.25332 Avicennia marina HOM05D000058 ORTHO05D000077 9.5e-06 52.8 37 59.5
Lj1g0017077 Lotus japonicus HOM05D000058 ORTHO05D000077 9.5e-06 52.8 37 59.5
Nn1g06201 Nelumbo nucifera HOM05D000058 ORTHO05D000077 9.5e-06 52.8 37 59.5
Potri.002G071800 Populus trichocarpa HOM05D000058 ORTHO05D000077 9.5e-06 52.8 30 73.3
Sabra02G0056600 Salix brachista HOM05D000058 ORTHO05D000077 9.5e-06 52.8 30 73.3
SalBow7G3899 Salvia bowleyana HOM05D000058 ORTHO05D000077 9.5e-06 52.8 37 62.2
VMungo0647G1854 Vigna mungo HOM05D000058 ORTHO05D000077 9.5e-06 52.8 37 62.2
VMungo1309G1965 Vigna mungo HOM05D000058 ORTHO05D000077 9.5e-06 52.8 37 59.5


User provided reference genes

Program Settings