Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009951001 Vitis vinifera HOM05D004095 ORTHO05D003197 4.4e-59 231.9 201 100.0
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 6.0e-16 88.6 127 58.3
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 1.9e-14 83.6 134 55.2
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.4e-12 77.4 144 49.3
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 1.8e-12 77.0 129 58.1
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.4e-12 76.6 144 49.3
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 3.1e-12 76.3 130 54.6
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 4.0e-12 75.9 144 47.9
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 4.0e-12 75.9 133 61.7
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 5.3e-12 75.5 129 51.9
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 5.3e-12 75.5 128 52.3
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 6.9e-12 75.1 137 56.2
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 9.0e-12 74.7 134 55.2
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 9.0e-12 74.7 129 51.9
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 1.5e-11 73.9 134 56.0
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 2.6e-11 73.2 129 51.2
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 2.6e-11 73.2 129 51.2
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.5e-11 72.4 170 44.1
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 4.5e-11 72.4 133 58.6
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 4.9e-10 68.9 138 48.6
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 6.4e-10 68.6 171 45.0
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 6.4e-10 68.6 126 53.2
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 8.4e-10 68.2 126 55.6
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 8.4e-10 68.2 128 53.9
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 8.4e-10 68.2 143 53.8
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 1.4e-09 67.4 136 55.9
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 1.9e-09 67.0 136 53.7
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 2.4e-09 66.6 182 45.6
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.4e-09 66.6 128 49.2
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 3.2e-09 66.2 170 42.9
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 3.2e-09 66.2 127 51.2
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 4.2e-09 65.9 140 48.6
HanXRQChr13g0387151 Helianthus annuus HOM05D004095 ORTHO05D003197 5.4e-09 65.5 128 56.2
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 5.4e-09 65.5 129 48.8
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 7.1e-09 65.1 139 53.2
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.2e-08 64.3 126 47.6
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 1.6e-08 63.9 172 41.9
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.6e-08 63.9 172 41.9
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.6e-08 63.9 181 40.3
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 2.7e-08 63.2 126 48.4
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 2.7e-08 63.2 161 47.2
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 3.5e-08 62.8 134 59.7
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 3.5e-08 62.8 128 50.0
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 3.5e-08 62.8 168 39.3
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 6.0e-08 62.0 144 39.6
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 1.0e-07 61.2 135 52.6
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 1.3e-07 60.8 128 46.1
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 1.3e-07 60.8 126 49.2
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 2.3e-07 60.1 168 41.7
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 3.9e-07 59.3 170 40.6
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 3.9e-07 59.3 188 43.1
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 5.1e-07 58.9 126 53.2
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 6.7e-07 58.5 131 49.6
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 1.9e-06 57.0 185 39.5
ECA233G2314 Erigeron canadensis HOM05D004095 ORTHO05D003197 1.9e-06 57.0 130 52.3
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.9e-06 57.0 167 26.9
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 2.5e-06 56.6 143 44.8
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 2.5e-06 56.6 126 42.9
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.3e-06 55.8 172 40.1
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 9.6e-06 54.7 128 54.7
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 9.6e-06 54.7 126 51.6


User provided reference genes

Program Settings