Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009870001 Vitis vinifera HOM05D000204 ORTHO05D440949 1.9e-22 108.2 52 100.0
PSO541G3781 Papaver somniferum HOM05D000204 ORTHO05D001668 2.0e-08 61.6 37 78.4
PSO675G9223 Papaver somniferum HOM05D000204 ORTHO05D001668 2.0e-08 61.6 37 78.4
TAR376G0252 Trochodendron aralioides HOM05D000204 ORTHO05D001668 7.7e-08 59.7 31 90.3
Ciclev10003150m.g Citrus clementina HOM05D000204 ORTHO05D001668 1.3e-07 58.9 28 96.4
CiPaw.08G064700 Carya illinoinensis HOM05D000204 ORTHO05D001668 2.2e-07 58.2 35 74.3
TAR381G0192 Trochodendron aralioides HOM05D000204 ORTHO05D001668 5.0e-07 57.0 37 75.7
MD15G1014300 Malus domestica HOM05D000204 ORTHO05D001668 6.5e-07 56.6 35 68.6
Nn5g29280 Nelumbo nucifera HOM05D000204 ORTHO05D001668 6.5e-07 56.6 34 76.5
Atru.chr13.321 Acer truncatum HOM05D000204 ORTHO05D001668 8.5e-07 56.2 28 89.3
Cfa013929 Carpinus fangiana HOM05D000204 ORTHO05D001668 8.5e-07 56.2 32 81.2
Haze_22612 Corylus avellana HOM05D000204 ORTHO05D001668 8.5e-07 56.2 32 81.2
ClCG05G018470 Citrullus lanatus HOM05D000204 ORTHO05D001668 1.1e-06 55.8 35 71.4
MELO3C003765.2 Cucumis melo HOM05D000204 ORTHO05D001668 1.1e-06 55.8 35 71.4
CsaV3_3G045710 Cucumis sativus L. HOM05D000204 ORTHO05D001668 1.1e-06 55.8 35 71.4
Duzib041G0720 Durio zibethinus HOM05D000204 ORTHO05D001668 1.1e-06 55.8 35 80.0
Duzib093G0693 Durio zibethinus HOM05D000204 ORTHO05D001668 1.1e-06 55.8 35 80.0
TAR628G1532 Trochodendron aralioides HOM05D000204 ORTHO05D001668 1.1e-06 55.8 39 69.2
Eucgr.F02085 Eucalyptus grandis HOM05D000204 ORTHO05D001668 1.5e-06 55.5 32 81.2
Gohir.D01G099000 Gossypium hirsutum HOM05D000204 ORTHO05D001668 1.5e-06 55.5 35 80.0
Gohir.D06G001100 Gossypium hirsutum HOM05D000204 ORTHO05D001668 1.5e-06 55.5 34 82.4
Gorai.002G124300 Gossypium raimondii HOM05D000204 ORTHO05D001668 1.5e-06 55.5 35 80.0
PGR031G3934 Punica granatum HOM05D000204 ORTHO05D001668 1.5e-06 55.5 32 78.1
TWI56G0157 Tripterygium wilfordii HOM05D000204 ORTHO05D001668 1.5e-06 55.5 32 78.1
Aqoxy5G01443 Aquilegia oxysepala HOM05D000204 ORTHO05D001668 1.9e-06 55.1 29 86.2
CARHR020340 Cardamine hirsuta HOM05D000204 ORTHO05D001668 1.9e-06 55.1 32 81.2
Cpa.g.sc26.27 Carica papaya HOM05D000204 ORTHO05D001668 1.9e-06 55.1 28 89.3
CiPaw.07G152300 Carya illinoinensis HOM05D000204 ORTHO05D001668 1.9e-06 55.1 35 71.4
COL.COLO4_26168 Corchorus olitorius HOM05D000204 ORTHO05D001668 1.9e-06 55.1 28 89.3
QL02p011098 Quercus lobata HOM05D000204 ORTHO05D001668 1.9e-06 55.1 28 89.3
Sed0001911 Sechium edule HOM05D000204 ORTHO05D001668 1.9e-06 55.1 28 89.3
Thecc.08G041500 Theobroma cacao HOM05D000204 ORTHO05D001668 1.9e-06 55.1 28 89.3
Sc02g0008470 Simmondsia chinensis HOM05D000204 ORTHO05D001668 2.5e-06 54.7 35 71.4
MBI05_g42298_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D001668 3.2e-06 54.3 34 76.5
Sed0016823 Sechium edule HOM05D000204 ORTHO05D001668 3.2e-06 54.3 35 68.6
THA.LOC104813801 Tarenaya hassleriana HOM05D000204 ORTHO05D001668 3.2e-06 54.3 32 78.1
BcaC07g38999 Brassica carinata HOM05D000204 ORTHO05D001668 4.2e-06 53.9 32 78.1
BcaC07g39002 Brassica carinata HOM05D000204 ORTHO05D001668 4.2e-06 53.9 32 78.1
C08p19730 Brassica napus HOM05D000204 ORTHO05D001668 4.2e-06 53.9 32 78.1
BolC8t49610H Brassica oleracea HOM05D000204 ORTHO05D001668 4.2e-06 53.9 32 78.1
Thhalv10009868m.g Eutrema salsugineum HOM05D000204 ORTHO05D001668 4.2e-06 53.9 32 78.1
Thhalv10026472m.g Eutrema salsugineum HOM05D000204 ORTHO05D001668 4.2e-06 53.9 32 78.1
Gohir.A06G005300 Gossypium hirsutum HOM05D000204 ORTHO05D001668 4.2e-06 53.9 34 79.4
Prupe.1G368100 Prunus persica HOM05D000204 ORTHO05D001668 4.2e-06 53.9 35 68.6
MD08G1015100 Malus domestica HOM05D000204 ORTHO05D001668 5.5e-06 53.5 35 65.7
Gohir.A05G187800 Gossypium hirsutum HOM05D000204 ORTHO05D001668 7.2e-06 53.1 35 74.3
A08p29670 Brassica napus HOM05D000204 ORTHO05D001668 9.5e-06 52.8 32 75.0
BraA08t34902Z Brassica rapa HOM05D000204 ORTHO05D001668 9.5e-06 52.8 32 75.0
Manes.05G149700 Manihot esculenta HOM05D000204 ORTHO05D001668 9.5e-06 52.8 28 82.1
Manes.18G015300 Manihot esculenta HOM05D000204 ORTHO05D001668 9.5e-06 52.8 28 85.7


User provided reference genes

Program Settings