Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 0.0e+00 1087.0 538 100.0
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 1.5e-223 779.6 540 68.7
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.3e-219 766.5 540 67.4
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.3e-219 766.5 541 68.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.1e-218 763.5 567 65.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.8e-216 756.1 540 67.0
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 4.0e-216 755.0 540 67.0
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 2.9e-214 748.8 542 65.9
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 1.0e-211 740.3 540 65.9
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.7e-211 739.6 542 66.6
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 1.5e-210 736.5 539 65.3
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 5.6e-210 734.6 540 66.5
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 9.5e-210 733.8 540 66.1
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 1.1e-208 730.3 540 66.5
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.2e-208 728.0 540 65.9
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.2e-208 728.0 540 65.7
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.3e-206 723.4 539 65.3
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 6.4e-206 721.1 542 65.3
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 8.6e-203 710.7 542 63.8
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 4.3e-202 708.4 539 62.7
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 9.5e-202 707.2 543 64.1
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 3.6e-201 705.3 540 63.7
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 4.7e-201 704.9 540 63.9
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.8e-200 703.0 540 60.7
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 1.2e-199 700.3 539 59.9
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 1.1e-197 693.7 540 60.2
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 2.3e-195 686.0 540 60.7
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.9e-194 682.9 542 61.8
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 5.6e-194 681.4 540 63.7
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 2.1e-193 679.5 542 59.8
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 3.6e-193 678.7 542 59.4
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.1e-192 677.2 539 59.4
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.1e-192 675.6 539 59.7
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 3.1e-192 675.6 541 59.9
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 9.0e-192 674.1 539 59.6
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.2e-191 673.7 542 58.9
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.5e-191 673.3 542 58.9
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 2.6e-191 672.5 539 59.4
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 5.8e-191 671.4 562 58.7
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 7.6e-191 671.0 541 59.7
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 9.9e-191 670.6 539 60.1
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 3.8e-190 668.7 544 60.1
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 8.4e-190 667.5 539 59.6
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 8.4e-190 667.5 540 59.3
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 8.4e-190 667.5 541 61.0
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.9e-189 666.4 544 61.9
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 3.2e-189 665.6 546 61.2
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 3.2e-189 665.6 540 57.6
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 1.6e-188 663.3 540 60.4
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 1.0e-187 660.6 543 58.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.0e-187 660.6 542 59.6
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.3e-187 660.2 541 60.4
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 1.3e-187 660.2 542 57.7
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 3.0e-187 659.1 543 59.1
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 5.1e-187 658.3 535 60.7
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 6.6e-187 657.9 540 59.6
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.9e-186 656.4 539 60.3
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.5e-186 656.0 542 58.9
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 2.5e-186 656.0 542 57.9
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 4.3e-186 655.2 543 58.4
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 3.6e-185 652.1 540 59.8
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 2.4e-184 649.4 549 57.9
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 2.0e-183 646.4 549 57.6
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 4.5e-183 645.2 540 58.1
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 7.6e-183 644.4 541 58.8
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 7.6e-183 644.4 538 58.9
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.7e-182 643.3 540 60.7
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.9e-182 642.5 541 58.0
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 4.9e-182 641.7 542 57.4
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 6.4e-182 641.3 539 60.1
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 1.9e-181 639.8 572 53.5
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 1.9e-181 639.8 534 59.6
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 3.5e-180 635.6 465 65.6
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 3.5e-180 635.6 540 58.1
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 4.6e-180 635.2 538 59.1
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 4.6e-180 635.2 539 59.2
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 3.9e-179 632.1 540 57.8
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 5.1e-179 631.7 539 59.0
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.5e-178 630.2 600 55.3
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.3e-177 627.1 541 56.2
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 1.1e-176 624.0 490 63.3
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.1e-173 614.0 540 54.8
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.7e-172 609.4 632 50.2
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.3e-171 606.3 459 60.8
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 2.3e-171 606.3 488 60.2
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 7.4e-170 601.3 542 54.8
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 4.0e-168 595.5 429 67.1
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 3.2e-165 585.9 591 53.3
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 4.1e-160 568.9 539 56.0
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 7.7e-159 564.7 446 61.2
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.3e-153 547.4 551 52.8
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.1e-152 544.3 560 52.1
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 7.7e-151 538.1 544 51.1
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.5e-149 533.1 485 55.5
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 2.5e-149 533.1 471 55.8
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 2.0e-138 496.9 561 49.9
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 3.1e-136 489.6 552 48.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.0e-130 470.3 310 71.3
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 1.6e-127 460.7 400 56.5
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 8.0e-124 448.4 476 47.1
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.1e-100 370.5 559 37.9
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.1e-93 348.2 559 35.4
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 5.4e-88 329.3 573 36.3
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 7.8e-87 325.5 470 39.6
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.3e-85 320.1 571 37.0
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.1e-83 315.1 564 36.7
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 4.9e-81 306.2 222 67.6
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 1.9e-64 251.1 208 58.7
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 6.0e-55 219.5 174 61.5
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.8e-54 218.0 257 44.0
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.2e-42 178.7 108 74.1
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.9e-32 144.8 197 43.1
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 7.9e-31 139.4 119 52.1
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.1e-27 129.0 76 77.6
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 4.7e-23 113.6 124 46.8
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 7.0e-19 99.8 68 69.1
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 2.7e-18 97.8 106 53.8
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 6.5e-09 66.6 51 64.7
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 2.7e-07 61.2 57 52.6
Cpa.g.sc14.103 Carica papaya HOM05D006698 ORTHO05D120905 4.7e-07 60.5 52 63.5
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 1.0e-06 59.3 84 39.3
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 3.0e-06 57.8 133 29.3


User provided reference genes

Program Settings