Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009798001 Vitis vinifera HOM05D001685 ORTHO05D009095 3.0e-60 235.0 115 100.0
GSVIVG01009800001 Vitis vinifera HOM05D001685 ORTHO05D009095 1.0e-31 140.2 80 88.8
Thecc.08G035400 Theobroma cacao HOM05D001685 ORTHO05D009095 1.9e-30 136.0 80 85.0
CiPaw.07G155500 Carya illinoinensis HOM05D001685 ORTHO05D009095 4.2e-30 134.8 80 83.8
MELO3C003786.2 Cucumis melo HOM05D001685 ORTHO05D009095 5.5e-30 134.4 80 83.8
CsaV3_3G045540 Cucumis sativus L. HOM05D001685 ORTHO05D009095 5.5e-30 134.4 80 83.8
PGR083G2764 Punica granatum HOM05D001685 ORTHO05D009095 5.5e-30 134.4 80 83.8
ClCG05G018650 Citrullus lanatus HOM05D001685 ORTHO05D009095 7.1e-30 134.0 80 83.8
COL.COLO4_26223 Corchorus olitorius HOM05D001685 ORTHO05D009095 7.1e-30 134.0 80 83.8
Dinv31798 Davidia involucrata HOM05D001685 ORTHO05D009095 9.3e-30 133.7 80 83.8
Haze_22569 Corylus avellana HOM05D001685 ORTHO05D009095 1.2e-29 133.3 80 82.5
TAR381G0057 Trochodendron aralioides HOM05D001685 ORTHO05D009095 1.6e-29 132.9 80 83.8
Cfa013891 Carpinus fangiana HOM05D001685 ORTHO05D009095 2.7e-29 132.1 80 81.2
Sc26g0003360 Simmondsia chinensis HOM05D001685 ORTHO05D009095 3.5e-29 131.7 80 82.5
Eucgr.F01606 Eucalyptus grandis HOM05D001685 ORTHO05D009095 6.0e-29 131.0 80 81.2
Potri.002G029600 Populus trichocarpa HOM05D001685 ORTHO05D009095 6.0e-29 131.0 80 82.5
Sabra05G0179800 Salix brachista HOM05D001685 ORTHO05D009095 7.9e-29 130.6 80 82.5
Nn5g29153 Nelumbo nucifera HOM05D001685 ORTHO05D009095 1.0e-28 130.2 80 82.5
Duzib041G0390 Durio zibethinus HOM05D001685 ORTHO05D009095 3.0e-28 128.6 80 81.2
Gohir.D05G259700 Gossypium hirsutum HOM05D001685 ORTHO05D009095 3.0e-28 128.6 80 81.2
Gorai.009G271500 Gossypium raimondii HOM05D001685 ORTHO05D009095 3.0e-28 128.6 80 81.2
Prupe.1G372200 Prunus persica HOM05D001685 ORTHO05D009095 3.9e-28 128.3 80 80.0
CSS0008119 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 5.1e-28 127.9 80 81.2
Manes.18G019200 Manihot esculenta HOM05D001685 ORTHO05D009095 5.1e-28 127.9 80 78.8
Gohir.A05G258300 Gossypium hirsutum HOM05D001685 ORTHO05D009095 1.1e-27 126.7 80 80.0
Rhsim07G0243900 Rhododendron simsii HOM05D001685 ORTHO05D009095 1.1e-27 126.7 80 80.0
CSS0037156 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 1.5e-27 126.3 80 80.0
MD15G1020600 Malus domestica HOM05D001685 ORTHO05D009095 1.5e-27 126.3 80 80.0
QL02p010383 Quercus lobata HOM05D001685 ORTHO05D009095 1.5e-27 126.3 80 80.0
QL02p010421 Quercus lobata HOM05D001685 ORTHO05D009095 1.5e-27 126.3 80 80.0
Sed0026661 Sechium edule HOM05D004346 ORTHO05D009095 1.9e-27 125.9 80 78.8
PSO541G2326 Papaver somniferum HOM05D001685 ORTHO05D009095 3.3e-27 125.2 80 78.8
PSO675G8938 Papaver somniferum HOM05D001685 ORTHO05D009095 3.3e-27 125.2 80 78.8
RcHm_v2.0_Chr6g0301971 Rosa chinensis HOM05D001685 ORTHO05D009095 4.3e-27 124.8 80 80.0
TWI56G0203 Tripterygium wilfordii HOM05D001685 ORTHO05D009095 4.3e-27 124.8 80 78.8
Atru.chr13.382 Acer truncatum HOM05D001685 ORTHO05D009095 7.4e-27 124.0 80 77.5
Aqoxy6G01232 Aquilegia oxysepala HOM05D001685 ORTHO05D009095 7.4e-27 124.0 80 77.5
Glyma.14G070100 Glycine max HOM05D001685 ORTHO05D009095 7.4e-27 124.0 80 78.8
arahy.Tifrunner.gnm1.ann1.0FMT0L Arachis hypogaea HOM05D001685 ORTHO05D009095 1.6e-26 122.9 80 76.2
arahy.Tifrunner.gnm1.ann1.1F2VQA Arachis hypogaea HOM05D001685 ORTHO05D009095 1.6e-26 122.9 80 76.2
Hund17205 Selenicereus undatus HOM05D001685 ORTHO05D009095 1.6e-26 122.9 80 76.2
vmacro04314 Vaccinium macrocarpon HOM05D001685 ORTHO05D009095 1.6e-26 122.9 80 77.5
Nitab4.5_0002156g0130 Nicotiana tabacum HOM05D001685 ORTHO05D009095 3.7e-26 121.7 80 76.2
VMungo0647G1310 Vigna mungo HOM05D001685 ORTHO05D009095 3.7e-26 121.7 80 76.2
SGA_v2.0_scaffold201G41336 Striga asiatica HOM05D001685 ORTHO05D009095 4.8e-26 121.3 80 72.5
CANSAT25G3574 Cannabis sativa HOM05D001685 ORTHO05D009095 6.3e-26 120.9 80 78.8
FAN27G2561 Fragaria x ananassa HOM05D001685 ORTHO05D009095 6.3e-26 120.9 80 78.8
CDE09G0148 Ceratophyllum demersum HOM05D005369 ORTHO05D009095 8.2e-26 120.6 80 73.8
Lj4C32T13 Lonicera japonica HOM05D001685 ORTHO05D009095 8.2e-26 120.6 80 73.8
SalBow7G2633 Salvia bowleyana HOM05D001685 ORTHO05D009095 8.2e-26 120.6 80 72.5
Ciclev10000620m.g Citrus clementina HOM05D001685 ORTHO05D009095 1.1e-25 120.2 80 73.8
FvH4_2g38870 Fragaria vesca HOM05D001685 ORTHO05D009095 1.1e-25 120.2 80 77.5
Phvul.001G010500 Phaseolus vulgaris HOM05D001685 ORTHO05D009095 1.1e-25 120.2 80 76.2
Medtr1g023160 Medicago truncatula HOM05D001685 ORTHO05D009095 1.4e-25 119.8 80 72.5
Glyma.17G254500 Glycine max HOM05D001685 ORTHO05D009095 1.8e-25 119.4 80 76.2
Lj5g0015544 Lotus japonicus HOM05D001685 ORTHO05D009095 1.8e-25 119.4 80 73.8
Nitab4.5_0001840g0040 Nicotiana tabacum HOM05D001685 ORTHO05D009095 1.8e-25 119.4 80 75.0
Peaxi162Scf00189g00133 Petunia axillaris HOM05D001685 ORTHO05D009095 3.1e-25 118.6 80 75.0
EL10Ac1g00578 Beta vulgaris HOM05D001685 ORTHO05D009095 4.1e-25 118.2 80 73.8
ATR0665G478 Amborella trichopoda HOM05D001685 ORTHO05D009095 5.3e-25 117.9 81 74.1
AUR62014453 Chenopodium quinoa HOM05D001685 ORTHO05D009095 5.3e-25 117.9 80 75.0
HanXRQChr05g0149471 Helianthus annuus HOM05D001685 ORTHO05D009095 5.3e-25 117.9 80 73.8
Ah.11g039830 Amaranthus hybridus HOM05D001685 ORTHO05D009095 6.9e-25 117.5 80 71.2
Hma1.2p1_1394F.1_g280400 Hydrangea macrophylla HOM05D001685 ORTHO05D009095 9.0e-25 117.1 80 73.8
Migut.C00777 Erythranthe guttata HOM05D001685 ORTHO05D009095 1.2e-24 116.7 80 72.5
Lsat_1_v5_gn_5_25621 Lactuca sativa HOM05D001685 ORTHO05D009095 1.2e-24 116.7 80 75.0
DCAR_017512 Daucus carota HOM05D001685 ORTHO05D009095 4.5e-24 114.8 80 72.5
SEGI_28040 Sequoiadendron giganteum HOM05D001685 ORTHO05D009095 4.5e-24 114.8 81 74.1
AUR62034545 Chenopodium quinoa HOM05D001685 ORTHO05D009095 5.9e-24 114.4 80 72.5
PGSC0003DMG402003705 Solanum tuberosum HOM05D001685 ORTHO05D009095 5.9e-24 114.4 80 70.0
Ca_13386_v3 Cicer arietinum L. HOM05D001685 ORTHO05D009095 7.6e-24 114.0 80 68.8
Cc10_g02280 Coffea canephora HOM05D001685 ORTHO05D009095 1.7e-23 112.8 80 71.2
ECA246G1724 Erigeron canadensis HOM05D001685 ORTHO05D009095 1.7e-23 112.8 80 71.2
Solyc04g080900.3 Solanum lycopersicum HOM05D001685 ORTHO05D009095 1.7e-23 112.8 80 68.8
Sopen04g034510 Solanum pennellii HOM05D001685 ORTHO05D009095 1.7e-23 112.8 80 68.8
CAN.G851.28 Capsicum annuum HOM05D001685 ORTHO05D009095 2.2e-23 112.5 80 70.0
THA.LOC104820512 Tarenaya hassleriana HOM05D001685 ORTHO05D009095 5.0e-23 111.3 80 70.0
Lalb_Chr14g0369641 Lupinus albus HOM05D001685 ORTHO05D009095 1.1e-22 110.2 81 71.6
Potri.005G233101 Populus trichocarpa HOM05D001685 ORTHO05D009095 4.2e-22 108.2 80 72.5
Cpa.g.sc99.23 Carica papaya HOM05D001685 ORTHO05D009095 9.3e-22 107.1 64 85.9
Os03g0799700 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D009095 1.6e-21 106.3 80 65.0
unitig_578.g16082 Utricularia gibba HOM05D001685 ORTHO05D009095 1.3e-20 103.2 80 63.8
Pp3c14_3560 Physcomitrium patens HOM05D001685 ORTHO05D009095 2.3e-20 102.4 83 65.1
Sabra02G0023600 Salix brachista HOM05D001685 ORTHO05D008134 5.1e-20 101.3 67 77.6
AagrBONN_evm.TU.Sc2ySwM_344.1121 Anthoceros agrestis HOM05D001685 ORTHO05D009095 9.7e-19 97.1 82 68.3
Zm00001eb061130 Zea mays HOM05D001685 ORTHO05D009095 3.7e-18 95.1 81 63.0
SMO300G0022 Selaginella moellendorffii HOM05D001685 ORTHO05D009095 1.4e-17 93.2 81 63.0
Mapoly0009s0196 Marchantia polymorpha HOM05D001685 ORTHO05D009095 1.8e-17 92.8 83 60.2
CBR_g20183 Chara braunii HOM05D001685 ORTHO05D009095 2.0e-16 89.4 81 60.5
TPR.G6019 Trifolium pratense HOM05D001685 ORTHO05D009095 1.0e-15 87.0 60 70.0
RcHm_v2.0_Chr7g0217061 Rosa chinensis HOM05D001685 ORTHO05D009095 2.1e-13 79.3 57 73.7
Oeu046227.1 Olea europaea HOM05D001685 ORTHO05D009095 2.7e-13 79.0 50 78.0
Sed0028196 Sechium edule HOM05D001685 ORTHO05D009095 6.7e-12 74.3 66 60.6


User provided reference genes

Program Settings