Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 9.6e-203 709.9 352 100.0
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 6.6e-127 458.0 358 64.0
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 4.7e-125 451.8 352 64.8
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 4.4e-123 445.3 356 64.3
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 1.7e-122 443.4 372 61.3
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 2.9e-122 442.6 311 67.8
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 3.7e-122 442.2 356 63.8
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 6.4e-122 441.4 305 70.2
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 3.2e-121 439.1 355 62.5
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 2.3e-119 433.0 357 59.9
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 1.1e-118 430.6 338 65.1
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.5e-118 430.3 361 62.3
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 3.3e-118 429.1 312 68.6
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 3.3e-118 429.1 355 60.6
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 4.3e-118 428.7 357 61.1
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 6.2e-117 424.9 347 64.6
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 2.0e-115 419.9 304 67.1
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 5.4e-113 411.8 361 57.6
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 1.2e-112 410.6 295 69.2
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 1.7e-111 406.8 329 60.5
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 1.7e-111 406.8 319 63.9
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 3.9e-111 405.6 328 61.3
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 1.5e-110 403.7 366 57.4
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 2.5e-110 402.9 316 63.0
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 4.3e-110 402.1 333 61.0
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 5.6e-110 401.7 302 64.2
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 7.3e-110 401.4 311 65.3
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 1.3e-109 400.6 361 56.2
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 2.1e-109 399.8 359 57.4
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 2.1e-109 399.8 318 62.6
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 3.6e-109 399.1 298 64.1
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 4.8e-109 398.7 335 59.4
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 1.4e-108 397.1 306 64.1
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 1.4e-108 397.1 314 62.7
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 2.4e-108 396.4 303 62.7
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 3.1e-108 396.0 331 58.9
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 5.3e-108 395.2 298 64.4
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 9.0e-108 394.4 324 59.0
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.2e-107 394.0 358 57.3
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 1.2e-107 394.0 339 56.9
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 1.5e-107 393.7 297 63.6
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 7.6e-107 391.3 354 57.1
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 1.3e-106 390.6 304 61.5
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 1.3e-106 390.6 323 59.8
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 3.8e-106 389.0 318 60.7
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 8.4e-106 387.9 323 59.4
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 1.4e-105 387.1 358 56.7
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 1.9e-105 386.7 303 61.4
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 2.4e-105 386.3 308 59.7
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 4.2e-105 385.6 339 56.9
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 5.4e-105 385.2 308 63.0
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 9.3e-105 384.4 331 56.8
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 3.5e-104 382.5 297 63.3
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 6.0e-104 381.7 275 69.1
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 1.0e-103 380.9 341 57.5
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 1.3e-103 380.6 351 54.4
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 2.3e-103 379.8 304 59.9
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 3.0e-103 379.4 342 58.5
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 6.6e-103 378.3 305 61.6
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 8.7e-103 377.9 315 58.1
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 1.5e-102 377.1 307 58.6
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 1.9e-102 376.7 300 61.0
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 1.9e-102 376.7 311 57.6
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 3.3e-102 375.9 331 56.8
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 2.8e-101 372.9 350 53.1
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 2.8e-101 372.9 304 59.5
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 3.1e-100 369.4 295 60.0
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 5.3e-100 368.6 309 58.3
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 6.9e-100 368.2 304 58.9
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 9.0e-100 367.9 300 61.0
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 1.5e-99 367.1 320 57.5
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 4.5e-99 365.5 304 58.9
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 5.8e-99 365.2 360 51.7
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 2.9e-98 362.8 334 55.7
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 1.1e-97 360.9 277 65.7
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 4.2e-97 359.0 304 59.5
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 7.9e-96 354.8 360 53.9
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 1.3e-95 354.0 321 55.1
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 9.6e-94 347.8 243 69.5
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 9.6e-94 347.8 337 53.7
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 3.7e-93 345.9 329 54.1
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 6.2e-93 345.1 337 52.8
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 1.2e-91 340.9 275 58.5
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 4.5e-91 339.0 248 65.7
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 1.3e-90 337.4 301 54.5
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.9e-90 336.3 305 56.1
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 1.1e-89 334.3 295 57.3
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 4.2e-89 332.4 304 54.6
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 3.0e-87 326.2 294 55.4
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 7.4e-86 321.6 238 66.0
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 7.4e-86 321.6 432 43.3
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.6e-83 313.2 247 60.7
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.1e-81 307.8 247 59.5
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 1.9e-81 307.0 312 52.9
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 7.4e-78 295.0 344 47.1
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 6.5e-74 282.0 304 51.3
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 1.8e-68 263.8 190 67.4
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 4.2e-65 252.7 218 60.1
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 1.8e-60 237.3 301 44.9
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 1.2e-59 234.6 293 45.7
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 1.3e-58 231.1 280 46.8
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 1.6e-56 224.2 291 44.0
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 4.4e-54 216.1 309 41.7
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 1.7e-50 204.1 164 61.6
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 6.1e-48 195.7 350 35.7
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 4.5e-43 179.5 404 32.2
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.8e-36 157.5 175 49.1
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 1.8e-28 131.0 328 33.2
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 2.7e-27 127.1 240 35.4
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.1e-25 121.7 108 54.6
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 3.6e-24 116.7 106 51.9
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.0e-22 110.9 124 44.4
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.7e-21 107.8 122 47.5
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 1.6e-19 101.3 105 50.5
COL.COLO4_19820 Corchorus olitorius HOM05D001041 ORTHO05D000846 1.4e-07 61.6 50 62.0


User provided reference genes

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