Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.9e-74 282.3 136 100.0
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 3.0e-59 231.9 136 81.6
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 8.1e-57 223.8 139 81.3
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 5.2e-56 221.1 136 80.9
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 5.8e-55 217.6 142 76.8
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 5.8e-55 217.6 142 76.8
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 8.4e-54 213.8 139 79.9
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 8.4e-54 213.8 139 79.9
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.9e-53 212.6 139 78.4
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 1.6e-52 209.5 137 77.4
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 6.0e-52 207.6 140 73.6
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 1.7e-51 206.1 133 77.4
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 6.6e-51 204.1 133 76.7
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.1e-50 203.4 133 76.7
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 1.1e-50 203.4 139 78.4
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 1.5e-50 203.0 135 77.8
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 1.9e-50 202.6 130 75.4
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.9e-50 202.6 140 76.4
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 2.5e-50 202.2 141 75.2
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 2.5e-50 202.2 139 73.4
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.5e-50 202.2 139 74.1
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 4.3e-50 201.4 133 78.2
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 7.3e-50 200.7 131 75.6
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 1.3e-49 199.9 134 77.6
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 1.3e-49 199.9 141 71.6
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 2.1e-49 199.1 132 74.2
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 4.8e-49 198.0 130 74.6
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 8.1e-49 197.2 136 77.2
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 8.1e-49 197.2 135 73.3
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.1e-48 196.8 137 74.5
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 1.4e-48 196.4 138 73.9
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.8e-48 196.1 130 72.3
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 2.4e-48 195.7 132 72.7
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 3.1e-48 195.3 136 73.5
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 3.1e-48 195.3 117 80.3
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 4.0e-48 194.9 133 69.9
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 4.0e-48 194.9 131 72.5
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.0e-48 194.9 137 73.7
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 5.3e-48 194.5 139 67.6
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 6.9e-48 194.1 130 71.5
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 9.0e-48 193.7 141 70.2
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.2e-47 193.4 139 74.1
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.2e-47 193.4 133 70.7
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.0e-47 192.6 135 70.4
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 5.8e-47 191.0 131 71.8
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 7.6e-47 190.7 111 82.9
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 7.6e-47 190.7 142 69.7
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 1.3e-46 189.9 130 69.2
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 1.7e-46 189.5 143 68.5
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 1.7e-46 189.5 138 70.3
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 2.9e-46 188.7 143 67.8
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 2.9e-46 188.7 143 67.8
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 3.8e-46 188.3 130 69.2
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 3.8e-46 188.3 131 71.0
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 4.9e-46 188.0 144 68.8
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 4.9e-46 188.0 144 68.8
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 4.9e-46 188.0 143 67.8
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 4.9e-46 188.0 117 76.1
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 4.9e-46 188.0 130 69.2
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 8.4e-46 187.2 132 68.9
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 8.4e-46 187.2 138 71.0
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 1.1e-45 186.8 143 67.8
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 1.1e-45 186.8 143 67.8
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 1.1e-45 186.8 131 68.7
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.1e-45 186.8 143 68.5
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 1.1e-45 186.8 136 72.1
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.4e-45 186.4 136 67.6
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.9e-45 186.0 138 68.8
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 2.4e-45 185.7 102 84.3
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 3.2e-45 185.3 128 72.7
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 4.2e-45 184.9 134 67.9
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 5.4e-45 184.5 144 67.4
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 5.4e-45 184.5 144 67.4
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 5.4e-45 184.5 144 67.4
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 5.4e-45 184.5 130 68.5
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 7.1e-45 184.1 138 71.0
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 9.3e-45 183.7 132 66.7
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 9.3e-45 183.7 137 67.2
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 1.2e-44 183.3 148 64.9
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 1.2e-44 183.3 148 65.5
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.6e-44 183.0 149 63.8
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 2.1e-44 182.6 146 64.4
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 2.7e-44 182.2 136 69.9
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 4.6e-44 181.4 132 66.7
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 7.9e-44 180.6 147 63.9
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 1.3e-43 179.9 138 67.4
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 1.8e-43 179.5 147 63.3
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 3.9e-43 178.3 123 69.1
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 3.9e-43 178.3 136 69.1
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 3.9e-43 178.3 136 69.1
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 3.9e-43 178.3 136 66.9
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 1.5e-42 176.4 145 61.4
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 4.3e-42 174.9 144 63.9
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 7.4e-42 174.1 146 62.3
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 9.6e-42 173.7 134 68.7
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 9.6e-42 173.7 134 68.7
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 2.1e-41 172.6 140 65.7
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 3.1e-40 168.7 101 80.2
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 4.0e-40 168.3 142 64.1
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 3.4e-39 165.2 98 76.5
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 7.6e-39 164.1 140 62.1
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.9e-38 162.2 111 71.2
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 2.9e-38 162.2 129 59.7
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 8.4e-38 160.6 131 61.8
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.2e-37 158.3 102 70.6
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 3.9e-35 151.8 102 69.6
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 6.7e-35 151.0 138 60.1
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 6.7e-35 151.0 138 60.1
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.5e-34 149.8 102 65.7
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.9e-34 149.4 102 64.7
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 1.9e-34 149.4 98 74.5
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 7.4e-34 147.5 111 58.6
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 9.3e-29 130.6 78 84.6
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 1.2e-28 130.2 102 54.9
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 2.7e-28 129.0 77 83.1
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 1.0e-27 127.1 117 54.7
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 4.3e-26 121.7 106 51.9
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 4.3e-26 121.7 100 55.0
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 4.8e-25 118.2 106 51.9
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.9e-22 109.0 74 74.3
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.9e-21 106.3 102 48.0
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 9.4e-21 104.0 58 79.3
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.6e-20 103.2 75 73.3
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.9e-18 96.3 99 43.4
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 6.3e-17 91.3 59 76.3
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 9.7e-10 67.4 57 56.1
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 1.1e-08 63.9 55 65.5


User provided reference genes

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