Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009733001 Vitis vinifera HOM05D008807 ORTHO05D010580 2.0e-55 219.2 133 100.0
Haze_17940 Corylus avellana HOM05D008807 ORTHO05D010580 5.7e-15 84.7 72 59.7
Ciclev10002762m.g Citrus clementina HOM05D008807 ORTHO05D010580 2.8e-14 82.4 64 60.9
Nn5g29649 Nelumbo nucifera HOM05D008807 ORTHO05D010580 4.9e-14 81.6 54 72.2
Dinv36101 Davidia involucrata HOM05D010025 ORTHO05D010580 1.6e-12 76.6 57 64.9
QL02p009078 Quercus lobata HOM05D008807 ORTHO05D010580 2.0e-12 76.3 63 55.6
Prupe.1G377200 Prunus persica HOM05D008807 ORTHO05D010580 4.5e-12 75.1 67 55.2
Dinv39435 Davidia involucrata HOM05D010025 ORTHO05D010580 1.7e-11 73.2 50 64.0
Cpa.g.sc123.50 Carica papaya HOM05D008807 ORTHO05D010580 2.3e-11 72.8 60 55.0
Thecc.08G029700 Theobroma cacao HOM05D008807 ORTHO05D010580 2.9e-11 72.4 55 60.0
TAR376G0370 Trochodendron aralioides HOM05D008807 ORTHO05D010580 3.9e-11 72.0 55 63.6
Aqoxy6G01147 Aquilegia oxysepala HOM05D008807 ORTHO05D010580 5.0e-11 71.6 69 55.1
RcHm_v2.0_Chr6g0301311 Rosa chinensis HOM05D008807 ORTHO05D010580 6.6e-11 71.2 63 54.0
Sabra05G0176700 Salix brachista HOM05D008807 ORTHO05D010580 6.6e-11 71.2 67 56.7
CANSAT25G2084 Cannabis sativa HOM05D008807 ORTHO05D010580 1.1e-10 70.5 66 57.6
TAR625G0014 Trochodendron aralioides HOM05D008807 ORTHO05D010580 1.5e-10 70.1 70 61.4
Potri.002G034300 Populus trichocarpa HOM05D008807 ORTHO05D010580 1.9e-10 69.7 66 56.1
MD08G1029300 Malus domestica HOM05D008807 ORTHO05D010580 2.5e-10 69.3 61 54.1
Rhsim06G0030900 Rhododendron simsii HOM05D010025 ORTHO05D013126 3.3e-10 68.9 66 60.6
Cc10_g02650 Coffea canephora HOM05D010025 ORTHO05D013126 4.3e-10 68.6 74 50.0
Gohir.D06G004700 Gossypium hirsutum HOM05D008807 ORTHO05D010580 9.5e-10 67.4 52 61.5
Gorai.010G009300 Gossypium raimondii HOM05D008807 ORTHO05D010580 9.5e-10 67.4 52 61.5
Gohir.A06G009200 Gossypium hirsutum HOM05D008807 ORTHO05D010580 1.2e-09 67.0 52 61.5
Potri.005G228800 Populus trichocarpa HOM05D008807 ORTHO05D010580 1.2e-09 67.0 67 56.7
FAN15G1874 Fragaria x ananassa HOM05D008807 ORTHO05D010580 1.6e-09 66.6 63 52.4
FAN20G0471 Fragaria x ananassa HOM05D008807 ORTHO05D010580 1.6e-09 66.6 63 52.4
MD15G1024800 Malus domestica HOM05D008807 ORTHO05D010580 2.1e-09 66.2 70 47.1
Haze_17942 Corylus avellana HOM05D008807 ORTHO05D010580 4.7e-09 65.1 60 51.7
FAN27G2218 Fragaria x ananassa HOM05D008807 ORTHO05D010580 4.7e-09 65.1 56 55.4
MBI16_g07724_MAGBIO Magnolia biondii HOM05D008807 ORTHO05D010580 4.7e-09 65.1 55 60.0
Manes.18G022900 Manihot esculenta HOM05D008807 ORTHO05D010580 4.7e-09 65.1 66 53.0
Actinidia22529 Actinidia chinensis HOM05D010025 ORTHO05D013126 6.1e-09 64.7 52 61.5
Cfa018176 Carpinus fangiana HOM05D008807 ORTHO05D010580 8.0e-09 64.3 62 53.2
PGR083G1167 Punica granatum HOM05D008807 ORTHO05D010580 1.8e-08 63.2 66 48.5
Glyma.04G031000 Glycine max HOM05D014928 ORTHO05D010580 3.1e-08 62.4 60 51.7
Glyma.06G030800 Glycine max HOM05D014928 ORTHO05D010580 5.2e-08 61.6 60 51.7
Lj1g0017273 Lotus japonicus HOM05D014928 ORTHO05D010580 5.2e-08 61.6 62 48.4
CDE06G2173 Ceratophyllum demersum HOM05D008807 ORTHO05D010580 1.2e-07 60.5 70 54.3
Phvul.009G059100 Phaseolus vulgaris HOM05D014928 ORTHO05D010580 1.2e-07 60.5 56 50.0
Lsat_1_v5_gn_4_117741 Lactuca sativa HOM05D010025 ORTHO05D013126 2.6e-07 59.3 56 55.4
arahy.Tifrunner.gnm1.ann1.08WRUD Arachis hypogaea HOM05D001173 ORTHO05D010580 4.4e-07 58.5 72 45.8
arahy.Tifrunner.gnm1.ann1.KF8GDN Arachis hypogaea HOM05D014928 ORTHO05D010580 4.4e-07 58.5 72 45.8
Nn1g04939 Nelumbo nucifera HOM05D008807 ORTHO05D010580 5.8e-07 58.2 39 71.8
Lalb_Chr11g0062291 Lupinus albus HOM05D014928 ORTHO05D010580 9.8e-07 57.4 67 47.8
Sopen04g034150 Solanum pennellii HOM05D010025 ORTHO05D013126 9.8e-07 57.4 58 51.7
Medtr3g112000 Medicago truncatula HOM05D014928 ORTHO05D010580 1.3e-06 57.0 68 41.2
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 1.3e-06 57.0 52 51.9
CSS0043815 Camellia sinensis var. sinensis HOM05D010025 ORTHO05D013126 2.2e-06 56.2 46 56.5
Gorai.005G108400 Gossypium raimondii HOM05D008807 ORTHO05D010580 2.2e-06 56.2 56 51.8
Psat5g016720 Pisum sativum HOM05D014928 ORTHO05D010580 2.2e-06 56.2 61 44.3
Rhsim06G0031600 Rhododendron simsii HOM05D010025 ORTHO05D013126 2.2e-06 56.2 47 66.0
PSO675G0429 Papaver somniferum HOM05D008807 ORTHO05D304012 2.9e-06 55.8 70 47.1
Sc15g0007050 Simmondsia chinensis HOM05D008807 ORTHO05D010580 2.9e-06 55.8 67 43.3
PGSC0003DMG400003739 Solanum tuberosum HOM05D010025 ORTHO05D013126 2.9e-06 55.8 56 53.6
CiPaw.15G081000 Carya illinoinensis HOM05D008807 ORTHO05D010580 4.9e-06 55.1 65 53.8
Manes.05G157800 Manihot esculenta HOM05D008807 ORTHO05D010580 4.9e-06 55.1 67 46.3
Gohir.A03G079200 Gossypium hirsutum HOM05D008807 ORTHO05D010580 6.4e-06 54.7 53 52.8
Gohir.D02G095100 Gossypium hirsutum HOM05D008807 ORTHO05D010580 6.4e-06 54.7 56 50.0
VMungo1309G1535 Vigna mungo HOM05D014928 ORTHO05D010580 6.4e-06 54.7 64 42.2


User provided reference genes

Program Settings