Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.3e-129 466.5 242 100.0
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 1.6e-79 300.1 242 65.7
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 7.3e-77 291.2 246 64.2
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 9.0e-75 284.3 232 69.0
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 8.4e-73 277.7 227 65.6
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 1.4e-72 276.9 246 61.4
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 4.2e-72 275.4 234 63.7
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 9.3e-72 274.2 231 65.4
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 1.6e-71 273.5 232 65.9
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 2.1e-71 273.1 229 63.3
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 1.3e-70 270.4 246 59.3
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.3e-70 270.4 242 62.8
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 3.0e-70 269.2 225 67.1
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.6e-68 263.5 229 62.9
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 2.1e-68 263.1 238 63.4
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 8.1e-68 261.2 234 62.8
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.1e-67 260.8 192 69.8
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.4e-67 260.4 234 62.8
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.8e-67 260.0 232 61.6
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 2.0e-66 256.5 243 61.3
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 2.6e-66 256.1 230 63.0
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 2.6e-66 256.1 224 62.1
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 4.5e-66 255.4 230 59.1
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 2.2e-65 253.1 191 70.2
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 2.9e-65 252.7 242 57.4
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 1.4e-64 250.4 242 57.9
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 3.2e-64 249.2 237 59.1
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 7.1e-64 248.1 235 59.6
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.2e-63 247.3 191 66.5
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 1.6e-63 246.9 241 60.2
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 4.6e-63 245.4 191 66.5
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 1.3e-62 243.8 220 62.7
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 2.3e-62 243.0 191 64.4
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 6.7e-62 241.5 192 66.7
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 1.5e-61 240.4 192 65.1
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.5e-61 240.4 189 65.6
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 2.5e-61 239.6 206 63.1
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 7.4e-61 238.0 175 68.0
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 7.4e-61 238.0 191 62.8
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 2.1e-60 236.5 191 63.4
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 2.1e-60 236.5 191 62.3
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 2.8e-60 236.1 202 63.4
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 4.8e-60 235.3 234 58.5
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 6.2e-60 235.0 202 62.9
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 1.1e-59 234.2 194 64.4
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.4e-59 233.8 191 64.9
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.4e-59 233.8 182 68.1
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 1.8e-59 233.4 236 56.4
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 1.8e-59 233.4 189 63.5
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 2.4e-59 233.0 191 64.9
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 5.3e-59 231.9 191 60.7
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.2e-58 230.7 192 62.0
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 2.0e-58 229.9 191 61.8
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 4.5e-58 228.8 199 62.8
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 7.6e-58 228.0 238 55.9
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.0e-57 227.6 191 63.9
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 2.2e-57 226.5 191 62.8
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 5.0e-57 225.3 192 65.6
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 5.0e-57 225.3 191 62.8
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 8.4e-57 224.6 191 62.3
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 2.5e-56 223.0 191 61.8
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 4.2e-56 222.2 195 62.6
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 5.5e-56 221.9 186 60.8
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 9.3e-56 221.1 206 61.2
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 9.3e-56 221.1 192 60.9
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.2e-55 220.7 192 61.5
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 2.1e-55 219.9 193 60.1
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 2.1e-55 219.9 193 60.1
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 2.7e-55 219.5 222 55.4
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 2.7e-55 219.5 222 55.4
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 3.5e-55 219.2 231 53.2
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 4.6e-55 218.8 222 55.4
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 6.1e-55 218.4 243 52.7
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 7.9e-55 218.0 222 55.4
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 1.0e-54 217.6 192 60.9
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.3e-54 217.2 192 60.9
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 6.7e-54 214.9 222 55.0
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.1e-53 214.2 163 65.6
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 9.7e-53 211.1 282 48.6
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 6.5e-49 198.4 192 58.3
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 2.7e-47 193.0 166 61.4
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 2.8e-44 183.0 169 58.0
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.3e-44 181.8 224 50.9
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 8.2e-44 181.4 174 58.6
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 8.2e-44 181.4 177 54.8
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.4e-43 180.6 177 54.2
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.1e-43 179.5 191 55.5
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 3.4e-42 176.0 190 49.5
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 1.7e-41 173.7 174 54.0
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 6.5e-41 171.8 190 47.4
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 6.1e-39 165.2 185 54.1
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 5.1e-38 162.2 118 67.8
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 3.7e-36 156.0 190 46.8
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 4.5e-34 149.1 176 44.9
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 6.5e-33 145.2 210 44.8
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 7.2e-32 141.7 169 46.2
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 7.2e-32 141.7 145 52.4
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 1.4e-30 137.5 100 68.0
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 6.3e-28 128.6 91 70.3
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.8e-27 127.1 89 71.9
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 5.5e-24 115.5 109 58.7
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 2.7e-23 113.2 110 55.5
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 3.0e-22 109.8 107 57.0
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 9.8e-21 104.8 224 32.6
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 6.8e-14 82.0 53 71.7
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 4.5e-10 69.3 45 77.8
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 1.4e-06 57.8 62 53.2


User provided reference genes

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