Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 3.7e-157 558.1 279 100.0
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 2.5e-81 306.2 276 59.1
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.4e-76 290.4 266 56.8
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.5e-76 289.7 266 56.8
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 6.5e-69 265.0 265 54.0
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.0e-66 256.1 278 53.6
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 2.0e-65 253.4 273 55.3
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 5.7e-65 251.9 284 53.5
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 2.2e-64 250.0 286 50.7
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 4.8e-64 248.8 265 50.6
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.6e-62 243.8 282 49.6
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.6e-62 243.8 312 48.4
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.9e-62 241.9 262 52.7
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 5.9e-62 241.9 262 52.7
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.0e-61 241.1 265 52.5
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 1.3e-61 240.7 265 52.1
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 2.2e-61 240.0 312 48.4
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.9e-61 239.6 263 54.8
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 2.9e-61 239.6 265 52.1
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.5e-60 237.3 249 53.8
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.2e-59 234.2 278 49.3
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.6e-59 232.6 311 46.6
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 8.0e-59 231.5 274 49.3
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 1.8e-58 230.3 270 51.5
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 4.0e-58 229.2 260 50.0
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 1.3e-56 224.2 275 49.5
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.8e-56 223.0 311 45.0
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 4.8e-56 222.2 285 46.7
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 8.2e-56 221.5 271 49.1
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 5.3e-55 218.8 280 47.1
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 3.5e-54 216.1 254 49.2
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 3.5e-54 216.1 263 48.3
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 3.5e-54 216.1 259 49.0
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.5e-54 215.7 228 54.4
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 4.5e-54 215.7 281 46.6
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 5.9e-54 215.3 280 48.2
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 5.9e-54 215.3 284 45.1
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 1.7e-53 213.8 262 49.6
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 1.7e-53 213.8 273 47.6
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 6.5e-53 211.8 241 53.1
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 8.5e-53 211.5 272 46.0
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.1e-52 211.1 279 46.6
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.5e-52 210.7 265 48.3
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 1.2e-51 207.6 273 47.3
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.2e-51 207.6 277 45.5
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 2.7e-51 206.5 261 49.0
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 8.0e-51 204.9 279 46.6
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 8.0e-51 204.9 256 46.5
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 8.0e-51 204.9 265 47.9
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.0e-50 203.0 188 59.6
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 6.8e-50 201.8 257 47.9
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 8.8e-50 201.4 270 46.7
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 1.2e-49 201.1 257 45.5
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 2.0e-49 200.3 286 45.8
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 2.6e-49 199.9 264 44.7
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 5.7e-49 198.7 283 42.8
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 9.8e-49 198.0 286 44.8
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 2.2e-48 196.8 312 41.0
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.2e-48 196.8 286 45.1
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 2.2e-48 196.8 266 43.2
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.8e-48 196.4 257 47.9
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 6.3e-48 195.3 286 45.1
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 8.3e-48 194.9 259 46.7
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 1.4e-47 194.1 284 41.9
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 3.1e-47 193.0 264 45.8
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 5.4e-47 192.2 257 45.9
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.6e-46 190.7 263 44.5
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.6e-46 190.7 261 44.1
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 4.5e-46 189.1 263 43.7
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 3.8e-45 186.0 272 41.9
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 1.1e-44 184.5 255 42.4
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 3.2e-44 183.0 261 45.6
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.6e-43 180.6 253 46.2
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 2.8e-43 179.9 258 44.6
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.8e-42 177.2 278 42.4
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 1.8e-42 177.2 257 44.0
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 5.2e-42 175.6 264 41.3
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 2.6e-41 173.3 288 41.0
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 2.2e-40 170.2 258 43.8
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 6.3e-40 168.7 262 39.7
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 9.2e-39 164.9 260 41.2
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 1.6e-38 164.1 268 39.6
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.6e-38 164.1 262 40.5
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.7e-38 163.3 249 42.6
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 7.8e-38 161.8 280 40.0
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.0e-37 161.4 263 40.3
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.0e-37 161.4 256 43.0
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.7e-37 160.6 258 42.2
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 2.3e-37 160.2 263 39.9
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 2.3e-37 160.2 263 39.9
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 2.3e-37 160.2 263 39.9
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 2.9e-37 159.8 271 38.4
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 5.0e-37 159.1 221 44.8
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 1.9e-36 157.1 263 40.3
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 2.5e-36 156.8 265 40.4
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 4.3e-36 156.0 258 39.9
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 4.3e-36 156.0 258 39.9
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 5.6e-36 155.6 262 39.3
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 7.3e-36 155.2 255 39.2
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 9.5e-36 154.8 263 40.7
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.2e-35 154.5 249 40.6
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.1e-35 153.7 209 47.8
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.8e-35 153.3 175 49.1
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 8.9e-34 148.3 275 37.1
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 2.0e-33 147.1 273 38.5
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 9.8e-33 144.8 222 42.8
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 3.7e-32 142.9 267 37.8
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 8.3e-32 141.7 269 37.5
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 5.4e-31 139.0 231 40.3
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 5.4e-31 139.0 256 36.7
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.7e-29 134.0 176 44.9
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.6e-27 127.5 123 55.3
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.9e-23 114.0 129 48.1
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.9e-21 106.3 159 43.4
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 4.6e-14 82.8 275 29.5
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 3.3e-12 76.6 122 37.7
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.2e-11 74.7 130 34.6
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 2.8e-11 73.6 93 46.2
CDE02G0146 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.1e-10 71.6 185 35.1
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.2e-09 68.2 124 37.1
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 1.5e-09 67.8 195 28.7
Pp3c7_23790 Physcomitrium patens HOM05D036654 ORTHO05D050357 1.2e-06 58.2 232 26.3


User provided reference genes

Program Settings