Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 0.0e+00 1428.7 785 100.0
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 2.2e-194 683.3 798 56.5
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 4.1e-177 625.9 866 50.1
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 3.5e-176 622.9 849 52.3
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 7.5e-171 605.1 882 50.8
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.0e-167 594.7 818 51.5
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.0e-164 584.7 907 48.3
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 4.0e-164 582.8 808 51.1
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.9e-158 563.9 830 49.3
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 1.5e-155 554.3 826 48.9
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 2.3e-151 540.4 647 54.4
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 4.3e-150 536.2 933 45.0
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 1.6e-149 534.3 794 48.7
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 3.6e-149 533.1 793 48.4
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 1.8e-148 530.8 800 46.5
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 7.5e-147 525.4 822 46.7
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.7e-146 524.2 825 46.7
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 5.0e-143 512.7 815 46.9
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 6.6e-143 512.3 628 51.9
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 5.6e-142 509.2 782 45.8
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.4e-140 504.6 798 48.2
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 8.3e-138 495.4 782 46.9
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 3.2e-137 493.4 784 48.5
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.6e-136 491.1 826 42.9
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 2.3e-135 487.3 840 46.1
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 2.3e-135 487.3 806 46.3
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.5e-134 483.8 800 46.4
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 1.1e-132 478.4 633 52.6
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 2.3e-132 477.2 808 45.0
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 3.1e-132 476.9 824 43.1
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 3.4e-131 473.4 813 44.4
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 4.4e-131 473.0 868 45.2
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 7.5e-131 472.2 828 45.7
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 1.7e-130 471.1 810 45.2
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 6.4e-130 469.2 795 45.4
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 1.9e-129 467.6 802 44.0
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 4.1e-129 466.5 809 44.3
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 1.7e-127 461.1 619 51.5
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 7.3e-126 455.7 803 44.6
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 2.6e-123 447.2 787 46.9
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 7.6e-123 445.7 671 46.8
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.4e-121 441.4 804 41.7
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 5.4e-121 439.5 793 42.9
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.3e-119 434.1 839 42.1
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 2.3e-119 434.1 801 43.2
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 1.1e-118 431.8 834 40.0
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.9e-118 431.0 584 53.4
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 1.6e-117 427.9 859 41.3
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 6.2e-117 426.0 715 44.6
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.4e-116 424.1 801 42.9
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 3.1e-116 423.7 810 43.6
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 3.1e-116 423.7 796 42.8
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 4.0e-116 423.3 658 46.0
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.2e-115 421.8 804 44.4
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 2.9e-114 417.2 786 42.4
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 2.9e-114 417.2 825 43.3
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 6.4e-114 416.0 825 41.7
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 1.4e-113 414.8 593 49.4
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.9e-113 414.5 846 41.8
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 6.6e-111 406.0 795 41.8
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 4.3e-110 403.3 828 40.5
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 4.3e-110 403.3 872 41.5
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 7.3e-110 402.5 824 41.3
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 1.3e-109 401.7 680 45.4
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 7.6e-107 392.5 636 45.6
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 2.9e-106 390.6 614 47.9
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 6.4e-106 389.4 815 41.5
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.9e-105 387.9 791 42.1
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.9e-105 387.9 862 41.6
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 3.2e-105 387.1 826 40.2
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 5.4e-105 386.3 866 41.8
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 6.4e-98 362.8 560 48.0
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 6.4e-98 362.8 560 48.0
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 1.9e-97 361.3 610 44.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 4.2e-97 360.1 836 39.8
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 5.5e-97 359.8 663 41.3
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 2.5e-94 350.9 293 70.3
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.7e-90 338.2 586 45.1
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.3e-87 328.6 751 39.1
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 2.2e-82 311.2 730 37.1
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 6.7e-79 299.7 670 38.8
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 1.4e-76 292.0 625 40.5
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 3.1e-76 290.8 610 42.5
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 6.9e-76 289.7 638 37.1
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.7e-74 285.0 810 37.2
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 1.7e-74 285.0 814 34.2
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 3.9e-71 273.9 461 42.5
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 3.9e-71 273.9 779 35.4
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 8.8e-71 272.7 826 36.8
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.1e-70 272.3 827 35.9
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 1.1e-68 265.8 626 37.7
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 1.1e-68 265.8 828 36.2
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 7.7e-67 259.6 551 38.3
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.3e-66 258.8 825 34.4
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.9e-65 255.0 809 33.9
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 6.1e-64 250.0 644 36.2
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 6.1e-64 250.0 644 36.2
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.0e-63 249.2 842 33.4
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.8e-63 248.4 590 35.9
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 5.3e-60 236.9 851 32.8
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 5.3e-60 236.9 641 34.9
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 9.4e-57 226.1 663 33.8
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.6e-56 225.3 718 33.7
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.5e-49 202.2 535 36.6
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 1.0e-47 196.1 307 44.0
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 1.8e-39 168.7 198 54.0
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 1.8e-39 168.7 419 38.7
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 8.9e-39 166.4 432 36.3
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 2.1e-32 145.2 692 28.9
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 4.0e-31 141.0 734 29.2
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 2.2e-29 135.2 855 26.8
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 2.2e-29 135.2 855 26.8
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.1e-25 122.9 150 55.3
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 2.8e-24 118.2 174 48.9
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 3.3e-09 68.2 161 36.0
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 3.6e-08 64.7 268 32.1
Nn1g08524 Nelumbo nucifera HOM05D000558 ORTHO05D003119 7.6e-06 57.0 40 65.0


User provided reference genes

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