Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009572001 Vitis vinifera HOM05D006182 ORTHO05D007236 4.3e-83 311.2 153 100.0
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 1.4e-49 199.9 122 78.7
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 1.2e-48 196.8 122 76.2
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 1.2e-48 196.8 127 71.7
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 1.6e-48 196.4 122 75.4
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 1.7e-47 193.0 123 75.6
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 1.4e-44 183.3 122 72.1
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 4.0e-44 181.8 122 69.7
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 4.0e-44 181.8 122 72.1
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 4.0e-44 181.8 142 64.8
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 6.8e-44 181.0 125 71.2
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 4.4e-43 178.3 121 71.9
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 1.7e-42 176.4 122 69.7
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 2.2e-42 176.0 122 68.9
Oeu032242.1 Olea europaea HOM05D006182 ORTHO05D007236 2.8e-42 175.6 122 69.7
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 4.9e-42 174.9 122 69.7
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 8.3e-42 174.1 141 62.4
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 8.3e-42 174.1 122 68.0
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 1.4e-41 173.3 123 69.1
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 4.1e-41 171.8 122 68.0
FAN10G2690 Fragaria x ananassa HOM05D006182 ORTHO05D007236 5.4e-41 171.4 137 65.0
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 1.2e-40 170.2 122 68.0
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.2e-40 170.2 131 66.4
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 7.7e-40 167.5 122 66.4
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 1.0e-39 167.2 122 66.4
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 1.3e-39 166.8 122 62.3
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 1.7e-39 166.4 122 67.2
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 2.3e-39 166.0 122 67.2
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 2.9e-39 165.6 121 66.1
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 2.9e-39 165.6 120 66.7
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 2.9e-39 165.6 114 63.2
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 2.9e-39 165.6 122 67.2
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 5.0e-39 164.9 122 61.5
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 6.6e-39 164.5 122 64.8
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 2.5e-38 162.5 122 65.6
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 4.7e-37 158.3 149 57.7
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 1.4e-36 156.8 114 62.3
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 2.6e-35 152.5 114 65.8
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 7.5e-35 151.0 157 51.0
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 7.5e-35 151.0 121 63.6
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 7.5e-35 151.0 121 63.6
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 1.7e-34 149.8 122 60.7
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 3.7e-34 148.7 121 62.8
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 4.9e-34 148.3 122 60.7
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 1.8e-33 146.4 121 61.2
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 1.8e-33 146.4 122 60.7
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 1.8e-33 146.4 124 62.9
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 2.4e-33 146.0 122 58.2
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 1.6e-32 143.3 121 58.7
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 4.6e-32 141.7 127 58.3
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.7e-31 139.8 127 56.7
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 1.1e-30 137.1 122 53.3
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 1.1e-30 137.1 121 57.0
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 1.2e-29 133.7 129 55.0
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 1.6e-29 133.3 121 58.7
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 1.0e-28 130.6 142 49.3
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 6.8e-28 127.9 103 58.3
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 4.4e-27 125.2 122 51.6
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 7.5e-27 124.4 142 47.2
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 1.7e-26 123.2 122 53.3
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 4.9e-26 121.7 78 73.1
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 6.4e-26 121.3 122 53.3
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 1.1e-25 120.6 122 50.8
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 1.1e-25 120.6 122 50.8
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 1.4e-25 120.2 152 46.1
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 2.4e-25 119.4 146 47.9
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 7.0e-25 117.9 122 50.8
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 2.0e-24 116.3 122 50.0
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 2.7e-24 115.9 122 49.2
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 6.0e-24 114.8 126 49.2
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 7.8e-24 114.4 90 62.2
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 1.0e-23 114.0 114 49.1
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 1.0e-23 114.0 122 49.2
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 1.3e-23 113.6 140 45.7
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 3.9e-23 112.1 146 47.9
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 3.9e-23 112.1 122 51.6
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 5.0e-23 111.7 99 58.6
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 4.3e-22 108.6 131 46.6
Lalb_Chr04g0264231 Lupinus albus HOM05D006182 ORTHO05D007236 2.8e-21 105.9 74 68.9
FAN16G1533 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.8e-20 103.2 134 46.3
SEGI_31096 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 3.1e-20 102.4 133 42.1
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.2e-19 100.5 178 40.4
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.6e-19 99.4 83 62.7
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 1.3e-18 97.1 122 37.7
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 1.7e-18 96.7 74 68.9
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 2.9e-18 95.9 121 45.5
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 1.1e-17 94.0 170 38.2
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 2.7e-16 89.4 74 60.8
Mapoly0037s0065 Marchantia polymorpha HOM05D006182 ORTHO05D007236 1.6e-13 80.1 113 38.1
Os09g0376000 Oryza sativa ssp. japonica HOM05D006182 ORTHO05D007236 1.8e-12 76.6 73 45.2
FAN19G3122 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.1e-12 75.9 48 72.9
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 1.9e-09 66.6 114 37.7
Sc15g0006460 Simmondsia chinensis HOM05D006182 ORTHO05D007236 2.1e-08 63.2 48 60.4
FAN18G1201 Fragaria x ananassa HOM05D010466 ORTHO05D007236 4.6e-08 62.0 43 62.8
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 8.6e-07 57.8 39 64.1


User provided reference genes

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