Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009571001 Vitis vinifera HOM05D006182 ORTHO05D007236 2.9e-151 538.5 266 100.0
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 6.4e-82 308.1 273 61.2
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 2.4e-81 306.2 278 59.7
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 1.2e-75 287.3 275 58.9
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 4.9e-74 282.0 271 53.5
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 2.4e-73 279.6 273 55.7
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 5.4e-73 278.5 273 54.9
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 9.2e-73 277.7 278 54.7
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 3.5e-72 275.8 273 54.9
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 1.0e-71 274.2 273 56.4
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 1.3e-71 273.9 267 53.6
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 5.1e-71 271.9 267 52.8
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 6.6e-71 271.6 270 55.6
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 1.2e-69 267.3 269 50.6
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 3.6e-69 265.8 270 54.1
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 6.2e-69 265.0 270 53.7
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 8.1e-69 264.6 274 51.8
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.4e-68 263.8 263 55.1
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 9.9e-67 257.7 270 50.4
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 1.1e-65 254.2 265 49.1
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 3.2e-65 252.7 271 50.9
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 4.6e-64 248.8 266 47.0
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 4.6e-64 248.8 266 48.5
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 1.0e-63 247.7 262 52.7
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 1.7e-63 246.9 283 49.1
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 3.6e-61 239.2 268 51.1
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 1.2e-59 234.2 270 48.9
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 1.7e-58 230.3 270 49.6
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 2.2e-58 229.9 268 47.0
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 2.4e-57 226.5 276 48.9
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 2.7e-56 223.0 275 49.5
Lalb_Chr04g0264181 Lupinus albus HOM05D006182 ORTHO05D007236 6.2e-53 211.8 268 46.6
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 2.0e-51 206.8 271 46.5
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 2.0e-51 206.8 268 46.3
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 4.5e-51 205.7 269 46.1
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 5.8e-51 205.3 245 47.3
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 1.1e-49 201.1 266 44.4
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 4.2e-49 199.1 202 50.0
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 5.5e-49 198.7 268 45.9
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 4.6e-48 195.7 275 44.7
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 6.0e-48 195.3 273 44.0
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 7.9e-48 194.9 265 41.1
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 7.9e-48 194.9 270 38.5
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 1.0e-47 194.5 262 44.7
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 1.3e-47 194.1 270 38.5
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 1.8e-47 193.7 270 38.5
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 5.1e-47 192.2 273 42.9
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 1.9e-46 190.3 192 54.7
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 5.6e-46 188.7 214 49.5
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 7.4e-46 188.3 273 42.5
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 9.6e-46 188.0 267 40.8
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 9.6e-46 188.0 270 37.8
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 1.3e-45 187.6 262 43.5
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 3.7e-45 186.0 273 39.2
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 6.2e-45 185.3 271 36.9
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 1.8e-44 183.7 266 42.5
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 1.8e-44 183.7 269 40.9
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 5.3e-44 182.2 221 47.1
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 5.3e-44 182.2 221 47.1
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 9.0e-44 181.4 268 39.2
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 9.0e-44 181.4 268 44.0
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 1.0e-42 177.9 267 44.6
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 2.2e-42 176.8 220 46.4
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 3.8e-42 176.0 268 38.4
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 1.1e-41 174.5 268 39.6
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 2.1e-40 170.2 279 36.9
Nitab4.5_0001611g0140 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.0e-39 167.9 207 42.0
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 6.7e-39 165.2 214 47.2
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 3.3e-38 162.9 170 51.8
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 1.3e-37 161.0 271 35.4
Nitab4.5_0003237g0010 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.4e-36 157.5 200 42.0
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 1.8e-36 157.1 273 36.3
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 9.0e-36 154.8 267 35.2
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 7.6e-35 151.8 207 38.2
HPP92_010556 Vanilla planifolia HOM05D006182 ORTHO05D007236 2.2e-34 150.2 208 41.8
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 8.5e-34 148.3 208 37.0
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 8.5e-34 148.3 208 37.0
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 1.1e-33 147.9 206 37.4
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 1.9e-33 147.1 208 37.0
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 2.5e-33 146.7 206 36.4
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 3.2e-33 146.4 270 36.3
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 7.2e-33 145.2 271 33.9
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 1.2e-32 144.4 205 36.6
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 1.4e-31 141.0 202 37.6
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 4.3e-30 136.0 274 35.0
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 3.4e-27 126.3 264 34.1
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 5.9e-27 125.6 258 34.9
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 1.2e-19 101.3 102 54.9
SEGI_19792 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 5.9e-19 99.0 290 29.0
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 1.1e-17 94.7 185 35.7
MBI16_g32432_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 3.3e-14 83.2 66 54.5
Psat2g076400 Pisum sativum HOM05D002050 ORTHO05D001949 3.1e-12 76.6 91 46.2
Solyc07g021115.1 Solanum lycopersicum HOM05D006182 ORTHO05D007236 2.6e-11 73.6 79 41.8


User provided reference genes

Program Settings