Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 8.2e-114 413.7 201 100.0
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 1.7e-82 309.7 193 76.2
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 1.1e-81 307.0 201 74.6
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 3.2e-78 295.4 203 71.4
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 7.2e-78 294.3 203 70.9
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 1.6e-77 293.1 198 73.2
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 2.1e-77 292.7 211 67.8
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 4.0e-76 288.5 194 71.6
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 4.0e-76 288.5 204 69.1
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 4.0e-76 288.5 202 69.8
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 1.5e-75 286.6 206 68.4
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 7.5e-75 284.3 202 68.8
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 9.7e-75 283.9 206 68.0
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 2.2e-74 282.7 205 67.8
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 2.2e-74 282.7 201 69.2
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 1.4e-73 280.0 201 68.2
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 1.8e-73 279.6 207 66.2
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 1.8e-73 279.6 204 67.6
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 4.1e-73 278.5 203 69.5
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 5.3e-73 278.1 206 68.0
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 1.2e-72 276.9 206 68.4
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 2.7e-72 275.8 204 66.7
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 5.9e-72 274.6 209 65.6
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 7.7e-72 274.2 198 69.7
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 1.3e-71 273.5 203 65.5
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 1.3e-71 273.5 199 67.8
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 2.2e-71 272.7 202 66.8
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 6.5e-71 271.2 197 67.0
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 1.5e-70 270.0 202 66.3
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 1.9e-70 269.6 202 65.3
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.5e-70 269.2 202 67.3
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 3.2e-70 268.9 202 62.4
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 3.2e-70 268.9 203 65.5
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 7.2e-70 267.7 201 64.7
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 7.2e-70 267.7 202 65.8
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 7.2e-70 267.7 202 65.8
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 7.2e-70 267.7 204 67.2
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 1.2e-69 266.9 193 67.9
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 1.2e-69 266.9 199 66.8
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 1.2e-69 266.9 202 65.8
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 1.6e-69 266.5 199 66.8
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 2.1e-69 266.2 200 66.5
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 2.7e-69 265.8 221 60.2
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 3.6e-69 265.4 196 65.8
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 4.7e-69 265.0 210 64.3
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 8.0e-69 264.2 202 63.4
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 4.0e-68 261.9 202 63.4
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 6.8e-68 261.2 196 65.3
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 3.4e-67 258.8 200 64.0
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 4.4e-67 258.5 224 58.5
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 7.5e-67 257.7 201 63.7
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 2.2e-66 256.1 194 64.9
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 2.2e-66 256.1 208 61.1
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 6.3e-66 254.6 194 64.4
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 8.3e-66 254.2 221 56.6
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 8.3e-66 254.2 207 62.3
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 1.4e-65 253.4 194 64.9
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 3.1e-65 252.3 183 64.5
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 3.1e-65 252.3 221 56.1
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 4.1e-65 251.9 187 63.1
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 4.1e-65 251.9 187 63.1
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 5.4e-65 251.5 187 63.1
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 5.4e-65 251.5 183 65.6
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 7.0e-65 251.1 190 64.2
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 9.1e-65 250.8 183 63.9
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 9.1e-65 250.8 191 66.0
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 1.6e-64 250.0 204 64.2
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 1.6e-64 250.0 199 60.3
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 2.0e-64 249.6 187 65.2
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 2.7e-64 249.2 183 64.5
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 4.5e-64 248.4 186 62.4
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 1.0e-63 247.3 215 57.7
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 1.0e-63 247.3 186 61.8
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 1.0e-63 247.3 181 68.0
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 2.3e-63 246.1 183 63.4
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 2.9e-63 245.7 184 64.1
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 3.8e-63 245.4 200 59.5
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.1e-62 243.8 189 61.9
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 1.1e-62 243.8 184 62.0
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 1.9e-62 243.0 196 61.2
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 2.5e-62 242.7 183 63.9
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 3.3e-62 242.3 211 57.3
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 4.2e-62 241.9 189 61.4
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 7.2e-62 241.1 182 65.4
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 9.5e-62 240.7 192 65.1
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 1.6e-61 240.0 192 64.6
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 2.1e-61 239.6 196 61.7
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 4.7e-61 238.4 209 59.3
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 6.1e-61 238.0 194 60.3
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 3.0e-60 235.7 198 61.1
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 1.3e-58 230.3 207 59.4
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 7.0e-57 224.6 185 61.1
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.6e-56 223.4 187 62.0
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 4.5e-56 221.9 193 57.0
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 1.1e-54 217.2 158 67.1
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 1.5e-54 216.9 164 67.1
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.5e-51 206.8 184 57.1
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 9.8e-51 204.1 173 61.8
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 2.3e-47 193.0 158 63.9
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 1.5e-46 190.3 143 65.0
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 3.3e-46 189.1 143 64.3
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 1.1e-44 184.1 146 62.3
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 4.4e-43 178.7 157 55.4
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 2.9e-42 176.0 117 70.9
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 3.7e-42 175.6 193 48.7
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 3.2e-41 172.6 233 42.5
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 4.1e-41 172.2 248 38.3
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 9.2e-41 171.0 213 46.5
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 6.0e-40 168.3 140 58.6
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 1.8e-36 156.8 117 60.7
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 4.0e-36 155.6 123 65.0
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 1.1e-28 131.0 154 43.5
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 7.6e-27 124.8 109 57.8
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 5.4e-25 118.6 110 58.2
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 1.4e-20 104.0 115 52.2
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 2.2e-18 96.7 64 71.9
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 7.3e-14 81.6 50 74.0
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.3e-13 80.9 58 72.4
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 3.1e-12 76.3 136 39.0
Cre14.g615250 Chlamydomonas reinhardtii HOM05D006792 ORTHO05D008489 2.4e-09 66.6 85 45.9
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 6.7e-07 58.5 68 47.1
Cre17.g702150 Chlamydomonas reinhardtii HOM05D005776 ORTHO05D007333 1.5e-06 57.4 69 36.2
Pp3c22_350 Physcomitrium patens HOM05D005776 ORTHO05D007333 2.5e-06 56.6 65 36.9


User provided reference genes

Program Settings