Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009552001 Vitis vinifera HOM05D001070 ORTHO05D010233 2.4e-63 245.4 127 100.0
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 3.5e-46 188.3 124 79.8
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 4.3e-44 181.4 133 72.9
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 3.5e-30 135.2 123 59.3
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 3.9e-29 131.7 131 58.0
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 5.5e-23 111.3 98 64.3
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 5.5e-23 111.3 131 48.1
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 3.0e-21 105.5 123 49.6
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.0e-21 105.5 133 49.6
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.3e-20 102.1 124 50.0
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.3e-20 102.1 124 50.0
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.3e-20 102.1 124 50.0
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 7.4e-20 100.9 72 68.1
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 1.3e-19 100.1 120 49.2
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 2.8e-19 99.0 125 45.6
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 6.3e-19 97.8 72 66.7
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 4.1e-18 95.1 125 44.8
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 1.5e-17 93.2 81 54.3
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.5e-17 93.2 78 60.3
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 4.5e-17 91.7 74 60.8
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.5e-17 91.7 80 57.5
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 6.5e-16 87.8 126 42.1
Migut.G01153 Erythranthe guttata HOM05D001070 ORTHO05D010233 8.5e-16 87.4 74 59.5
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 8.5e-16 87.4 118 44.1
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.1e-15 87.0 73 56.2
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 7.2e-15 84.3 126 42.9
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 7.2e-15 84.3 126 42.9
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 7.2e-15 84.3 126 42.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 7.2e-15 84.3 126 42.9
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 9.4e-15 84.0 121 45.5
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 1.2e-14 83.6 71 57.7
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 7.9e-14 80.9 111 45.0
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 3.3e-12 75.5 108 40.7
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 4.3e-12 75.1 156 35.9
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 3.7e-11 72.0 81 46.9
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 3.7e-11 72.0 81 48.1
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 6.3e-11 71.2 119 39.5
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 8.2e-11 70.9 118 39.0
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 8.2e-11 70.9 118 39.0
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 8.2e-11 70.9 118 39.0
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 8.2e-11 70.9 118 39.0
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 8.2e-11 70.9 118 39.0
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 8.2e-11 70.9 118 39.0
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 5.3e-10 68.2 52 59.6
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 3.4e-09 65.5 97 43.3
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 2.2e-08 62.8 100 43.0
Solyc10g049470.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.2e-06 57.0 114 37.7


User provided reference genes

Program Settings