Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009550001 Vitis vinifera HOM05D004348 ORTHO05D006191 2.1e-39 165.2 84 100.0
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 1.8e-22 109.0 54 98.1
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 5.4e-19 97.4 64 78.1
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.6e-18 95.9 73 68.5
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 6.6e-17 90.5 55 81.8
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 1.9e-16 89.0 55 80.0
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 1.9e-16 89.0 55 76.4
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 3.3e-16 88.2 55 74.5
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 3.3e-16 88.2 64 70.3
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 4.3e-16 87.8 55 78.2
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 4.3e-16 87.8 55 74.5
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 1.6e-15 85.9 54 75.9
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 2.1e-15 85.5 55 76.4
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 2.8e-15 85.1 57 73.7
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 3.6e-15 84.7 55 76.4
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 4.7e-15 84.3 55 74.5
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 4.7e-15 84.3 56 76.8
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 4.7e-15 84.3 54 75.9
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 4.7e-15 84.3 55 78.2
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 4.7e-15 84.3 55 78.2
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 6.2e-15 84.0 65 70.8
Lsat_1_v5_gn_9_98160 Lactuca sativa HOM05D004348 ORTHO05D005602 6.2e-15 84.0 55 76.4
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 6.2e-15 84.0 54 75.9
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 6.2e-15 84.0 57 73.7
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 8.1e-15 83.6 55 72.7
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 1.1e-14 83.2 66 65.2
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 1.8e-14 82.4 55 70.9
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 1.8e-14 82.4 54 74.1
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 1.8e-14 82.4 54 74.1
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 2.4e-14 82.0 64 64.1
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 3.1e-14 81.6 55 72.7
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 3.1e-14 81.6 63 61.9
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 3.1e-14 81.6 64 64.1
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 5.2e-14 80.9 55 69.1
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 5.2e-14 80.9 55 67.3
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 6.8e-14 80.5 55 70.9
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 8.9e-14 80.1 54 72.2
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 8.9e-14 80.1 54 74.1
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 8.9e-14 80.1 55 72.7
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 8.9e-14 80.1 55 72.7
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 8.9e-14 80.1 55 72.7
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 1.2e-13 79.7 55 69.1
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 1.2e-13 79.7 73 60.3
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 1.5e-13 79.3 55 70.9
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 1.5e-13 79.3 55 69.1
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 2.0e-13 79.0 55 69.1
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 2.0e-13 79.0 54 72.2
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 2.6e-13 78.6 63 68.3
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 3.4e-13 78.2 54 70.4
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 3.4e-13 78.2 55 67.3
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 3.4e-13 78.2 58 70.7
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 7.6e-13 77.0 55 72.7
Aa31LG2G16170 Aethionema arabicum HOM05D004348 ORTHO05D006191 9.9e-13 76.6 65 58.5
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 9.9e-13 76.6 55 70.9
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 1.3e-12 76.3 56 71.4
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 1.3e-12 76.3 55 69.1
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 1.3e-12 76.3 57 68.4
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 1.7e-12 75.9 56 67.9
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 2.9e-12 75.1 55 65.5
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 2.9e-12 75.1 55 65.5
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 2.9e-12 75.1 55 63.6
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 2.9e-12 75.1 55 63.6
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 2.9e-12 75.1 55 63.6
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 2.9e-12 75.1 55 63.6
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 2.9e-12 75.1 65 64.6
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 3.8e-12 74.7 56 67.9
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 3.8e-12 74.7 55 63.6
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 4.9e-12 74.3 57 61.4
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 4.9e-12 74.3 54 68.5
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 6.4e-12 73.9 63 58.7
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 8.4e-12 73.6 57 61.4
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 1.1e-11 73.2 56 64.3
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.1e-11 73.2 56 69.6
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 2.4e-11 72.0 56 67.9
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 3.2e-11 71.6 65 61.5
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 3.2e-11 71.6 65 61.5
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 3.2e-11 71.6 65 61.5
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 7.1e-11 70.5 55 69.1
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 7.1e-11 70.5 64 56.2
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 9.2e-11 70.1 54 66.7
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 3.5e-10 68.2 56 64.3
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 3.5e-10 68.2 41 78.0
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 4.6e-10 67.8 56 64.3
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 6.0e-10 67.4 62 59.7
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 2.3e-09 65.5 61 55.7
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.3e-09 65.5 53 66.0
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.3e-09 65.5 53 66.0
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 2.3e-09 65.5 55 65.5
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 3.9e-09 64.7 55 60.0
Atru.chr1.1667 Acer truncatum HOM05D004348 ORTHO05D006191 1.5e-08 62.8 53 58.5
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 1.9e-08 62.4 54 61.1
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 3.3e-08 61.6 54 63.0
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 2.1e-07 58.9 60 53.3
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 2.1e-07 58.9 37 75.7
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 1.1e-06 56.6 56 55.4


User provided reference genes

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