Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.8e-151 538.5 252 100.0
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 8.6e-137 490.3 252 89.3
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 4.3e-136 488.0 252 89.3
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 1.6e-135 486.1 251 87.6
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 2.1e-135 485.7 252 87.3
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 8.0e-135 483.8 250 88.0
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.7e-132 476.1 252 87.7
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.9e-131 472.6 252 84.1
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 3.2e-131 471.9 252 84.9
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 4.1e-131 471.5 253 85.0
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 9.2e-131 470.3 252 84.1
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 1.6e-130 469.5 252 84.5
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.7e-130 468.8 250 83.6
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 4.6e-130 468.0 245 87.3
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.3e-129 466.5 252 84.1
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.7e-129 466.1 252 83.7
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.7e-129 466.1 237 90.3
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 3.0e-129 465.3 236 90.7
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.5e-128 463.0 253 83.8
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 4.3e-128 461.5 236 90.3
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 5.6e-128 461.1 236 88.6
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 5.6e-128 461.1 252 83.3
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.6e-128 461.1 237 89.0
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.6e-127 459.5 236 88.6
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.1e-127 459.1 250 82.4
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 2.8e-127 458.8 252 82.5
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 3.6e-127 458.4 238 88.7
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 6.2e-127 457.6 236 89.8
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 1.4e-126 456.4 236 87.7
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.3e-126 455.7 251 80.5
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 4.0e-126 454.9 237 86.1
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 4.0e-126 454.9 236 86.0
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 6.8e-126 454.1 236 86.4
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.5e-125 453.0 236 87.7
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.0e-125 452.6 245 83.3
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 4.4e-125 451.4 236 86.0
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.3e-124 449.9 236 87.7
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.3e-124 449.9 236 87.7
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 1.3e-124 449.9 236 86.0
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.7e-124 449.5 228 90.8
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 2.2e-124 449.1 236 85.6
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 3.7e-124 448.4 244 84.0
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 3.7e-124 448.4 252 81.0
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 4.9e-124 448.0 237 85.2
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 4.9e-124 448.0 236 85.2
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 4.9e-124 448.0 236 86.9
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 6.4e-124 447.6 235 85.1
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.1e-123 446.8 254 79.9
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.4e-123 446.4 237 85.7
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.9e-123 446.0 250 79.2
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 4.1e-123 444.9 236 86.4
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 5.4e-123 444.5 238 83.6
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 5.4e-123 444.5 237 85.7
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 9.2e-123 443.7 239 83.7
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.5e-122 441.8 236 87.7
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 4.6e-122 441.4 237 84.4
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 4.6e-122 441.4 238 84.5
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.0e-122 441.0 235 86.0
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 7.8e-122 440.7 236 85.2
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.3e-121 439.9 236 86.0
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.7e-121 439.5 236 83.5
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.0e-121 438.7 245 81.2
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 6.6e-121 437.6 239 82.4
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.5e-120 436.4 236 85.2
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.9e-120 436.0 245 80.0
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 3.3e-120 435.3 238 83.6
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 9.5e-120 433.7 251 77.3
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.6e-119 433.0 236 81.8
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.8e-119 432.2 238 81.5
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.6e-119 431.8 252 76.2
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.8e-118 429.5 247 77.3
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 4.0e-118 428.3 243 78.6
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 8.4e-116 420.6 234 80.3
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 8.4e-116 420.6 247 75.3
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.1e-115 420.2 247 76.1
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 3.2e-115 418.7 236 78.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 5.4e-115 417.9 247 75.3
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 5.4e-115 417.9 283 71.7
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 7.1e-115 417.5 247 74.9
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 7.1e-115 417.5 247 74.9
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 9.2e-115 417.2 247 74.5
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.1e-114 416.0 247 74.5
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.1e-113 411.4 236 77.5
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 6.6e-113 411.0 236 77.1
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.1e-112 410.2 236 77.1
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 4.3e-112 408.3 249 73.5
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 5.6e-112 407.9 231 78.4
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.6e-112 407.1 236 76.3
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.2e-109 400.2 241 75.9
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 2.0e-109 399.4 238 74.8
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 2.0e-109 399.4 232 77.2
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 2.6e-109 399.1 246 71.5
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 8.4e-108 394.0 244 72.1
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 3.9e-105 385.2 233 74.7
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.9e-104 382.9 252 65.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.2e-98 363.6 220 75.0
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 1.0e-97 360.5 237 71.3
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 6.7e-97 357.8 186 89.2
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 1.6e-95 353.2 235 66.8
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 2.4e-94 349.4 237 65.8
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 3.9e-89 332.0 183 82.0
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 6.9e-86 321.2 189 83.1
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 7.6e-85 317.8 172 86.6
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.2e-84 316.2 172 84.3
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 1.8e-73 280.0 162 79.0
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 2.5e-72 276.2 302 44.4
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 4.2e-67 258.8 156 75.6
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 5.1e-65 251.9 191 64.9
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 8.8e-65 251.1 158 68.4
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 5.3e-62 241.9 255 43.1
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.3e-62 241.9 138 81.2
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 2.2e-60 236.5 152 69.7
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 3.6e-58 229.2 189 56.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.4e-54 217.2 126 79.4
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 8.5e-52 208.0 124 73.4
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 7.2e-43 178.3 94 84.0
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 5.6e-19 99.0 87 62.1
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 8.9e-17 91.7 59 69.5
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-09 66.6 79 41.8
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 5.2e-09 65.9 91 46.2


User provided reference genes

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