Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.5e-121 439.5 212 100.0
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 6.0e-91 337.8 210 79.0
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 7.8e-91 337.4 212 78.8
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 6.6e-90 334.3 212 77.4
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.3e-88 330.1 212 77.4
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 2.8e-88 328.9 212 76.9
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 8.1e-88 327.4 212 73.6
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 4.4e-86 321.6 212 72.6
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.3e-85 320.1 212 74.1
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.1e-84 317.0 211 73.5
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.9e-84 316.2 217 71.4
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.4e-84 315.8 212 74.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 9.3e-84 313.9 214 73.8
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 2.1e-83 312.8 211 72.0
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 2.1e-83 312.8 212 69.8
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 6.0e-83 311.2 210 70.5
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 3.0e-82 308.9 210 72.4
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 4.3e-81 305.1 212 73.6
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 4.3e-81 305.1 211 70.6
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 9.6e-81 303.9 212 70.8
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.3e-80 303.5 211 69.2
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.6e-80 303.1 213 70.0
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 2.1e-80 302.8 213 69.5
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.8e-80 302.4 211 72.0
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.8e-80 302.4 212 69.3
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.1e-79 300.4 212 68.9
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 2.6e-78 295.8 212 67.9
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 5.8e-78 294.7 212 65.6
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 2.9e-77 292.4 213 66.7
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 2.9e-77 292.4 212 66.5
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 2.9e-77 292.4 216 68.1
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 8.4e-77 290.8 214 67.3
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.1e-76 290.4 213 69.5
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 4.2e-76 288.5 214 66.4
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 4.2e-76 288.5 213 66.2
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 7.1e-76 287.7 211 68.2
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 9.3e-76 287.3 212 66.5
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.7e-75 285.8 216 66.2
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.5e-75 285.4 216 65.7
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 6.0e-75 284.6 212 69.3
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.3e-74 282.7 210 66.2
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 2.3e-74 282.7 210 64.3
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 3.0e-74 282.3 212 64.6
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 5.1e-74 281.6 211 65.4
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.5e-73 280.0 212 65.6
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.9e-73 279.6 212 65.6
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 5.6e-73 278.1 212 64.6
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 5.6e-73 278.1 212 65.6
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 3.7e-72 275.4 212 67.5
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 4.8e-72 275.0 210 66.7
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 8.1e-72 274.2 215 65.6
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-71 273.9 228 61.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 5.3e-71 271.6 212 62.7
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 3.4e-70 268.9 210 65.2
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.2e-69 266.2 212 64.6
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.1e-68 263.8 210 64.3
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 9.3e-68 260.8 210 63.3
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.2e-67 260.4 212 61.8
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.6e-67 260.0 212 61.3
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 3.5e-67 258.8 212 61.3
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 6.0e-67 258.1 210 63.3
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 7.9e-67 257.7 289 48.4
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.3e-66 256.9 212 61.3
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.3e-66 256.9 219 63.0
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 3.9e-66 255.4 212 60.8
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 2.5e-65 252.7 217 59.9
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 2.5e-65 252.7 187 62.6
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 3.3e-65 252.3 205 62.9
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.6e-64 250.0 223 58.3
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.1e-64 249.6 223 58.7
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 3.7e-64 248.8 220 57.7
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 6.2e-64 248.1 173 66.5
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 8.2e-64 247.7 219 60.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.4e-63 246.9 169 71.0
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.2e-62 243.8 212 57.5
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.2e-62 243.8 144 78.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 4.5e-62 241.9 193 61.7
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 5.8e-62 241.5 174 66.7
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 5.8e-62 241.5 212 57.1
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.0e-61 240.7 146 82.2
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.7e-61 240.0 212 58.5
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 5.5e-60 235.0 210 56.7
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 6.1e-59 231.5 212 59.0
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 2.5e-57 226.1 212 54.7
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 2.8e-56 222.6 144 72.9
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 3.7e-56 222.2 212 54.2
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.1e-55 220.7 215 53.5
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 5.0e-53 211.8 161 66.5
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.9e-52 209.9 217 53.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 2.5e-52 209.5 183 57.4
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 2.1e-51 206.5 211 51.7
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.5e-44 183.0 187 52.9
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 1.8e-42 176.8 140 65.0
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 8.5e-37 157.9 163 47.9
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 4.8e-32 142.1 134 56.0
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 9.1e-31 137.9 120 56.7
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 1.2e-30 137.5 149 44.3
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.0e-29 134.4 189 39.2
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 7.2e-28 128.3 95 66.3
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.6e-27 127.1 200 41.0
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 8.0e-27 124.8 125 56.8
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 2.0e-25 120.2 150 46.0
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 5.7e-25 118.6 105 58.1
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 2.1e-19 100.1 87 59.8
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.0e-17 93.6 126 42.1
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 8.9e-10 68.2 74 51.4
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.5e-09 67.4 42 64.3
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 2.0e-09 67.0 39 66.7
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 6.4e-08 62.0 35 74.3
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 4.1e-07 59.3 39 64.1
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 1.2e-06 57.8 68 50.0


User provided reference genes

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