Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009322001 Vitis vinifera HOM05D002412 ORTHO05D002516 1.5e-62 242.7 119 100.0
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 3.8e-26 121.7 121 57.9
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 5.5e-25 117.9 121 52.9
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 1.6e-24 116.3 152 48.7
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 1.6e-24 116.3 134 53.7
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.1e-24 115.9 119 57.1
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.3e-23 112.5 131 52.7
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 6.7e-23 110.9 134 51.5
Dinv39215 Davidia involucrata HOM05D002412 ORTHO05D002516 2.5e-22 109.0 86 66.3
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 3.3e-22 108.6 137 51.1
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.2e-21 105.9 131 51.9
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 2.2e-21 105.9 125 52.8
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 5.3e-20 101.3 131 49.6
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 5.3e-20 101.3 122 50.8
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 9.0e-20 100.5 111 54.1
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.5e-19 99.8 121 49.6
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 2.0e-19 99.4 123 47.2
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 2.0e-19 99.4 134 54.5
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 7.7e-19 97.4 134 52.2
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 1.0e-18 97.1 137 46.7
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.0e-18 97.1 134 52.2
Sabra09G0066300 Salix brachista HOM05D002412 ORTHO05D002516 2.9e-18 95.5 113 52.2
Nitab4.5_0007781g0010 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.8e-18 95.1 132 42.4
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 6.5e-18 94.4 131 46.6
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 1.4e-17 93.2 126 45.2
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 5.5e-17 91.3 120 48.3
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 7.2e-17 90.9 135 43.0
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 1.2e-16 90.1 118 48.3
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 2.1e-16 89.4 119 47.1
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 2.1e-16 89.4 118 53.4
CSS0009619 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 3.6e-16 88.6 127 47.2
MELO3C016826.2 Cucumis melo HOM05D002412 ORTHO05D002516 3.6e-16 88.6 114 52.6
TPR.G33675 Trifolium pratense HOM05D002412 ORTHO05D002516 3.6e-16 88.6 124 47.6
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 4.6e-16 88.2 119 50.4
CsaV3_4G035130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 4.6e-16 88.2 112 50.0
Lj4C72T9 Lonicera japonica HOM05D002412 ORTHO05D002516 6.1e-16 87.8 124 50.0
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 6.1e-16 87.8 120 50.0
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 7.9e-16 87.4 134 51.5
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 1.8e-15 86.3 136 42.6
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 1.8e-15 86.3 126 48.4
Nitab4.5_0002040g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.8e-15 86.3 132 42.4
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.8e-15 86.3 123 48.0
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 2.3e-15 85.9 108 50.9
Prupe.8G147000 Prunus persica HOM05D002412 ORTHO05D002516 2.3e-15 85.9 128 44.5
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 3.0e-15 85.5 128 41.4
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 5.1e-15 84.7 96 52.1
Glyma.04G046600 Glycine max HOM05D002412 ORTHO05D002516 5.1e-15 84.7 125 45.6
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 8.8e-15 84.0 132 40.2
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 1.1e-14 83.6 108 49.1
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 1.5e-14 83.2 122 47.5
CAN.G606.66 Capsicum annuum HOM05D002412 ORTHO05D002516 2.0e-14 82.8 132 37.9
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 2.0e-14 82.8 115 44.3
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 2.0e-14 82.8 115 41.7
Solyc04g077690.3 Solanum lycopersicum HOM05D002412 ORTHO05D002516 2.0e-14 82.8 128 43.8
Sopen04g031330 Solanum pennellii HOM05D002412 ORTHO05D002516 2.0e-14 82.8 128 43.8
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 3.3e-14 82.0 112 48.2
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.3e-14 82.0 119 52.1
CiPaw.07G173700 Carya illinoinensis HOM05D002412 ORTHO05D002516 4.3e-14 81.6 133 44.4
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 4.3e-14 81.6 134 40.3
CiPaw.06G164900 Carya illinoinensis HOM05D002412 ORTHO05D002516 5.7e-14 81.3 119 44.5
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 5.7e-14 81.3 119 52.1
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 5.7e-14 81.3 119 52.1
TWI59G0380 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 7.4e-14 80.9 117 45.3
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 9.7e-14 80.5 131 40.5
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 9.7e-14 80.5 115 45.2
FAN24G3376 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.3e-13 80.1 97 49.5
Lalb_Chr11g0062941 Lupinus albus HOM05D002412 ORTHO05D002516 1.3e-13 80.1 115 47.8
Nn5g30629 Nelumbo nucifera HOM05D002412 ORTHO05D002516 1.3e-13 80.1 120 45.8
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 1.3e-13 80.1 121 46.3
CiPaw.05G019200 Carya illinoinensis HOM05D002412 ORTHO05D002516 1.7e-13 79.7 116 46.6
TWI56G0446 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.7e-13 79.7 107 48.6
Glyma.01G242100 Glycine max HOM05D002412 ORTHO05D002516 2.2e-13 79.3 108 46.3
Potri.001G292100 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.2e-13 79.3 125 43.2
Potri.009G086600 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.2e-13 79.3 108 50.9
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 2.2e-13 79.3 131 42.7
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.8e-13 79.0 124 44.4
Peaxi162Scf00016g03017 Petunia axillaris HOM05D002412 ORTHO05D002516 2.8e-13 79.0 92 46.7
MELO3C018019.2 Cucumis melo HOM05D002412 ORTHO05D002516 4.8e-13 78.2 116 46.6
CsaV3_4G000130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 4.8e-13 78.2 116 46.6
Nitab4.5_0003953g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 4.8e-13 78.2 128 42.2
Phvul.001G028800 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 4.8e-13 78.2 120 45.8
Sabra16G0182100 Salix brachista HOM05D002412 ORTHO05D002516 4.8e-13 78.2 140 42.9
THA.LOC104807210 Tarenaya hassleriana HOM05D002412 ORTHO05D002516 6.3e-13 77.8 115 46.1
ClCG10G010090 Citrullus lanatus HOM05D002412 ORTHO05D002516 8.2e-13 77.4 132 41.7
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 8.2e-13 77.4 116 43.1
FvH4_2g03590 Fragaria vesca HOM05D002412 ORTHO05D002516 8.2e-13 77.4 89 50.6
Glyma.10G256100 Glycine max HOM05D002412 ORTHO05D002516 8.2e-13 77.4 122 46.7
FAN15G1641 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.4e-12 76.6 113 45.1
FAN20G0615 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.4e-12 76.6 113 45.1
Oeu020549.2 Olea europaea HOM05D002412 ORTHO05D002516 1.4e-12 76.6 119 47.1
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 1.8e-12 76.3 116 48.3
ECA236G2487 Erigeron canadensis HOM05D002412 ORTHO05D002516 1.8e-12 76.3 109 45.0
RcHm_v2.0_Chr6g0252561 Rosa chinensis HOM05D002412 ORTHO05D002516 2.4e-12 75.9 97 47.4
MBI16_g37755_MAGBIO Magnolia biondii HOM05D002412 ORTHO05D002516 3.1e-12 75.5 126 42.1
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.1e-12 75.5 120 44.2
Psat0ss7070g0040 Pisum sativum HOM05D002412 ORTHO05D002516 3.1e-12 75.5 123 46.3
Cpa.g.sc106.37 Carica papaya HOM05D002412 ORTHO05D002516 5.3e-12 74.7 126 39.7
PGSC0003DMG401011556 Solanum tuberosum HOM05D002412 ORTHO05D002516 6.9e-12 74.3 130 42.3
Peaxi162Scf00081g00269 Petunia axillaris HOM05D002412 ORTHO05D002516 9.1e-12 73.9 122 43.4
Glyma.20G135500 Glycine max HOM05D002412 ORTHO05D002516 1.2e-11 73.6 121 43.8
MD10G1108100 Malus domestica HOM05D002412 ORTHO05D002516 1.2e-11 73.6 96 45.8
Phvul.002G051300 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.2e-11 73.6 124 42.7
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 1.5e-11 73.2 103 44.7
TWI14G1286 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.5e-11 73.2 117 44.4
VMungo1215G2231 Vigna mungo HOM05D002412 ORTHO05D002516 1.5e-11 73.2 109 44.0
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 2.0e-11 72.8 128 47.7
PSO675G0250 Papaver somniferum HOM05D002412 ORTHO05D002516 2.0e-11 72.8 79 53.2
Sed0002993 Sechium edule HOM05D002412 ORTHO05D002516 2.0e-11 72.8 95 49.5
Solyc12g088300.2 Solanum lycopersicum HOM05D002412 ORTHO05D002516 2.6e-11 72.4 130 41.5
FAN20G2155 Fragaria x ananassa HOM05D002412 ORTHO05D002516 4.5e-11 71.6 129 38.0
Sopen12g030300 Solanum pennellii HOM05D002412 ORTHO05D002516 4.5e-11 71.6 130 41.5
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 5.9e-11 71.2 121 41.3
PGSC0003DMG400025836 Solanum tuberosum HOM05D002412 ORTHO05D002516 5.9e-11 71.2 134 38.1
MSTRG.20224 Avicennia marina HOM05D002412 ORTHO05D002516 1.0e-10 70.5 130 36.9
Glyma.06G047300 Glycine max HOM05D002412 ORTHO05D002516 1.0e-10 70.5 100 45.0
PSO541G5000 Papaver somniferum HOM05D002412 ORTHO05D002516 1.0e-10 70.5 79 51.9
Phvul.007G046700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.0e-10 70.5 116 43.1
TWI12G0423 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.0e-10 70.5 127 41.7
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 1.3e-10 70.1 125 41.6
Psat4g227320 Pisum sativum HOM05D002412 ORTHO05D002516 1.3e-10 70.1 102 44.1
Actinidia34355 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.7e-10 69.7 116 43.1
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 1.7e-10 69.7 117 41.0
Gohir.A12G019300 Gossypium hirsutum HOM05D002412 ORTHO05D002516 2.9e-10 68.9 138 39.9
Lj1g0009349 Lotus japonicus HOM05D002412 ORTHO05D002516 2.9e-10 68.9 115 44.3
ClCG05G020680 Citrullus lanatus HOM05D002412 ORTHO05D002516 3.8e-10 68.6 107 46.7
VMungo0720G0862 Vigna mungo HOM05D002412 ORTHO05D002516 3.8e-10 68.6 116 43.1
AUR62041661 Chenopodium quinoa HOM05D002412 ORTHO05D002516 5.0e-10 68.2 129 40.3
Medtr3g103260 Medicago truncatula HOM05D002412 ORTHO05D002516 5.0e-10 68.2 102 48.0
Oeu048571.1 Olea europaea HOM05D002412 ORTHO05D002516 5.0e-10 68.2 117 41.0
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 8.5e-10 67.4 122 41.8
FAN15G1065 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.1e-09 67.0 154 33.8
Gohir.D12G019500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.1e-09 67.0 120 40.8
Gorai.008G019800 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.1e-09 67.0 120 40.8
Sed0010289 Sechium edule HOM05D002412 ORTHO05D002516 1.4e-09 66.6 114 43.9
DCAR_001741 Daucus carota HOM05D002412 ORTHO05D002516 1.9e-09 66.2 118 38.1
Lalb_Chr02g0144931 Lupinus albus HOM05D002412 ORTHO05D002516 1.9e-09 66.2 119 38.7
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.5e-09 65.9 128 38.3
Phvul.009G072700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 4.2e-09 65.1 91 48.4
CSS0003834 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 5.5e-09 64.7 123 44.7
Lalb_Chr21g0308011 Lupinus albus HOM05D002412 ORTHO05D002516 5.5e-09 64.7 117 44.4
MSTRG.16674 Avicennia marina HOM05D002412 ORTHO05D002516 7.2e-09 64.3 127 37.0
DCAR_009875 Daucus carota HOM05D002412 ORTHO05D002516 7.2e-09 64.3 119 44.5
Sed0020406 Sechium edule HOM05D002412 ORTHO05D002516 7.2e-09 64.3 113 44.2
Nitab4.5_0001185g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 9.4e-09 63.9 78 44.9
Peaxi162Scf00160g00517 Petunia axillaris HOM05D002412 ORTHO05D002516 9.4e-09 63.9 125 40.0
Lj5g0012685 Lotus japonicus HOM05D002412 ORTHO05D002516 1.6e-08 63.2 126 42.1
MD05G1102500 Malus domestica HOM05D002412 ORTHO05D002516 1.6e-08 63.2 100 42.0
Sc02g0007970 Simmondsia chinensis HOM05D002412 ORTHO05D002516 2.7e-08 62.4 116 36.2
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 2.7e-08 62.4 110 40.0
Gohir.A06G024600 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.6e-08 62.0 121 40.5
Medtr1g106080 Medicago truncatula HOM05D002412 ORTHO05D002516 3.6e-08 62.0 135 37.8
TPR.G21149 Trifolium pratense HOM05D002412 ORTHO05D002516 4.7e-08 61.6 140 37.1
Gorai.010G026300 Gossypium raimondii HOM05D002412 ORTHO05D002516 6.1e-08 61.2 119 40.3
PSO017G0848 Papaver somniferum HOM05D002412 ORTHO05D002516 7.9e-08 60.8 118 45.8
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 7.9e-08 60.8 101 41.6
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 7.9e-08 60.8 101 41.6
Gohir.D06G021700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.0e-07 60.5 119 39.5
Psat6g017720 Pisum sativum HOM05D002412 ORTHO05D002516 1.4e-07 60.1 103 44.7
MSTRG.24380 Avicennia marina HOM05D002412 ORTHO05D002516 2.3e-07 59.3 110 38.2
CANSAT25G0992 Cannabis sativa HOM05D002412 ORTHO05D002516 2.3e-07 59.3 96 43.8
CANSAT25G1695 Cannabis sativa HOM05D002412 ORTHO05D002516 2.3e-07 59.3 96 43.8
CARHR241890 Cardamine hirsuta HOM05D002412 ORTHO05D002516 3.9e-07 58.5 102 40.2
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 3.9e-07 58.5 78 52.6
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 5.1e-07 58.2 67 52.2
PGSC0003DMG400010615 Solanum tuberosum HOM05D002412 ORTHO05D002516 5.1e-07 58.2 119 38.7
AT4G33800 Arabidopsis thaliana HOM05D002412 ORTHO05D002516 8.8e-07 57.4 102 40.2
FvH4_2g32900 Fragaria vesca HOM05D002412 ORTHO05D002516 8.8e-07 57.4 118 36.4
AL7G17660 Arabidopsis lyrata HOM05D002412 ORTHO05D002516 1.1e-06 57.0 103 38.8
Duzib132G0526 Durio zibethinus HOM05D002412 ORTHO05D002516 1.1e-06 57.0 44 63.6
Eucgr.F00090 Eucalyptus grandis HOM05D002412 ORTHO05D002516 1.1e-06 57.0 88 42.0
Medtr1g017890 Medicago truncatula HOM05D002412 ORTHO05D002516 1.1e-06 57.0 93 47.3
FAN24G0690 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.5e-06 56.6 79 41.8
Lalb_Chr22g0355701 Lupinus albus HOM05D002412 ORTHO05D002516 1.5e-06 56.6 123 37.4
PSO170G3219 Papaver somniferum HOM05D002412 ORTHO05D002516 1.5e-06 56.6 119 47.1
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 2.0e-06 56.2 75 52.0
Gohir.D13G044350 Gossypium hirsutum HOM05D002412 ORTHO05D002516 2.0e-06 56.2 81 42.0
ClCG08G016590 Citrullus lanatus HOM05D002412 ORTHO05D002516 2.6e-06 55.8 112 41.1
DCAR_029176 Daucus carota HOM05D002412 ORTHO05D002516 2.6e-06 55.8 94 43.6
Sc15g0005620 Simmondsia chinensis HOM05D002412 ORTHO05D002516 3.3e-06 55.5 131 33.6
Eucgr.I01046 Eucalyptus grandis HOM05D002412 ORTHO05D002516 4.4e-06 55.1 130 36.9
Gorai.013G051000 Gossypium raimondii HOM05D002412 ORTHO05D002516 4.4e-06 55.1 81 42.0
Sed0010950 Sechium edule HOM05D002412 ORTHO05D002516 4.4e-06 55.1 126 37.3
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 5.7e-06 54.7 67 50.7
Gohir.A13G047300 Gossypium hirsutum HOM05D002412 ORTHO05D002516 7.4e-06 54.3 81 40.7
BraA01t00437Z Brassica rapa HOM05D002412 ORTHO05D002516 9.7e-06 53.9 98 41.8
Carub.0007s0663 Capsella rubella HOM05D002412 ORTHO05D002516 9.7e-06 53.9 102 39.2
Ca_11030_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 9.7e-06 53.9 145 35.9


User provided reference genes

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