Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 2.3e-229 798.5 397 100.0
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 1.2e-188 663.3 395 83.0
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 3.0e-184 648.7 398 82.4
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 4.3e-183 644.8 397 82.1
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 6.2e-182 641.0 397 80.4
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 2.0e-180 636.0 397 81.6
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 8.4e-179 630.6 398 80.2
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 3.2e-178 628.6 412 78.6
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 1.3e-176 623.2 397 79.3
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 3.0e-176 622.1 397 76.8
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 8.7e-176 620.5 413 78.2
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 8.7e-176 620.5 398 78.4
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 7.3e-175 617.5 397 78.6
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 7.3e-175 617.5 398 77.9
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.8e-174 615.5 397 77.6
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 2.8e-174 615.5 397 77.6
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 4.8e-174 614.8 393 78.4
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 6.2e-174 614.4 397 76.6
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 8.1e-174 614.0 397 78.8
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 4.0e-173 611.7 397 76.8
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.6e-172 609.0 397 76.8
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 5.8e-172 607.8 397 77.3
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 2.9e-171 605.5 399 76.4
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 3.8e-171 605.1 389 78.7
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 4.9e-171 604.7 400 77.2
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 8.4e-171 604.0 442 70.6
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 2.4e-170 602.4 397 75.6
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 4.2e-170 601.7 397 75.8
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 4.2e-170 601.7 397 75.8
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 7.1e-170 600.9 400 76.2
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 1.2e-169 600.1 391 77.7
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 1.2e-169 600.1 398 75.4
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 1.2e-169 600.1 399 76.2
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 2.1e-169 599.4 426 73.0
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 4.6e-169 598.2 400 76.2
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 1.0e-168 597.0 399 75.4
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 8.7e-168 594.0 399 77.2
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 1.1e-167 593.6 397 74.3
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 1.9e-167 592.8 414 74.2
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 7.4e-167 590.9 397 73.8
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 1.3e-166 590.1 389 75.8
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 2.1e-166 589.3 397 75.1
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 1.4e-165 586.6 394 76.1
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 1.8e-165 586.3 424 72.9
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 2.4e-165 585.9 397 73.3
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 4.5e-164 581.6 397 73.0
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 4.5e-164 581.6 397 74.6
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 7.6e-164 580.9 412 74.5
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.9e-163 578.9 397 74.3
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 2.9e-163 578.9 398 72.9
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 6.4e-163 577.8 397 71.0
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 1.4e-162 576.6 393 74.3
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 3.2e-162 575.5 397 73.8
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 5.5e-162 574.7 399 72.4
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 2.7e-161 572.4 424 68.9
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 1.3e-158 563.5 389 74.6
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 2.1e-158 562.8 397 73.3
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 8.2e-158 560.8 396 72.0
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 8.2e-158 560.8 397 71.5
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 1.4e-157 560.1 397 71.3
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 3.1e-157 558.9 397 71.0
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 5.3e-157 558.1 389 73.0
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 7.6e-156 554.3 398 70.1
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 1.0e-155 553.9 401 69.6
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 1.3e-155 553.5 404 70.0
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 3.8e-155 552.0 397 70.3
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 8.4e-155 550.8 391 72.4
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 3.2e-154 548.9 400 71.5
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 7.1e-154 547.7 396 70.5
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 7.1e-154 547.7 357 77.3
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 7.1e-154 547.7 400 70.5
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 2.1e-153 546.2 398 70.4
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 4.6e-153 545.0 398 70.6
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 1.0e-152 543.9 398 70.4
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 3.0e-152 542.3 391 71.6
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 2.5e-151 539.3 399 68.7
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 4.3e-151 538.5 398 69.3
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 9.7e-151 537.3 396 69.4
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 1.3e-150 537.0 396 69.7
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 4.5e-148 528.5 395 69.1
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 7.7e-148 527.7 402 69.4
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.3e-147 526.9 397 68.8
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 1.1e-146 523.9 402 68.2
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 1.4e-146 523.5 391 69.1
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 3.2e-146 522.3 402 67.9
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 1.6e-145 520.0 403 66.7
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 3.0e-144 515.8 405 65.9
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 1.3e-139 500.4 398 64.8
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 2.9e-139 499.2 388 67.3
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 1.9e-138 496.5 393 64.4
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 3.2e-138 495.7 397 64.5
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 5.5e-138 495.0 308 81.8
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.8e-133 479.9 432 60.6
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 2.4e-133 479.6 376 66.8
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 4.1e-133 478.8 414 62.6
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 5.5e-130 468.4 390 61.0
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 4.7e-129 465.3 390 60.8
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 5.2e-128 461.8 394 61.4
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 2.6e-127 459.5 393 59.3
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 4.8e-126 455.3 387 63.0
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 6.5e-123 444.9 416 60.3
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 1.2e-121 440.7 396 58.1
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 1.0e-120 437.6 398 61.3
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 4.0e-120 435.6 398 59.3
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 1.5e-119 433.7 270 79.6
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 7.7e-116 421.4 401 57.6
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 3.0e-112 409.5 448 53.3
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 1.0e-107 394.4 307 66.4
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.8e-101 373.6 428 50.2
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 5.4e-101 372.1 305 63.9
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 5.8e-95 352.1 397 49.6
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 2.3e-91 340.1 392 49.2
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 5.8e-87 325.5 295 58.3
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 7.5e-87 325.1 392 46.4
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 1.7e-83 313.9 384 47.1
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 6.6e-83 312.0 237 65.0
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 2.0e-79 300.4 424 42.5
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 4.9e-70 269.2 429 43.1
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 1.7e-67 260.8 443 42.2
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 9.3e-61 238.4 257 50.2
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 1.9e-58 230.7 156 71.2
vmacro21420 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 2.0e-55 220.7 166 71.7
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 4.1e-40 169.9 109 78.9
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.2e-39 168.3 109 78.0
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.0e-39 167.5 109 78.9
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.4e-37 161.4 109 76.1
QL12p038454 Quercus lobata HOM05D005471 ORTHO05D006170 1.3e-33 148.3 117 70.9
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 6.9e-32 142.5 127 59.8
DCAR_020059 Daucus carota HOM05D005471 ORTHO05D006170 1.3e-30 138.3 96 75.0
Cpa.g.sc142.58 Carica papaya HOM05D005471 ORTHO05D006170 2.1e-28 131.0 88 77.3
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 1.8e-27 127.9 100 65.0
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 1.7e-25 121.3 124 54.8
Gorai.001G227100 Gossypium raimondii HOM05D005471 ORTHO05D006170 9.1e-24 115.5 67 82.1
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 1.4e-21 108.2 80 63.8
SEGI_29276 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 1.5e-15 88.2 81 60.5
Gohir.D11G128350 Gossypium hirsutum HOM05D005471 ORTHO05D006170 7.7e-15 85.9 50 80.0
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 2.2e-14 84.3 95 44.2
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 8.5e-14 82.4 349 26.9
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 2.1e-12 77.8 67 55.2
Phvul.009G072333 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 4.0e-11 73.6 61 52.5
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 5.2e-11 73.2 57 64.9


User provided reference genes

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