Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 6.0e-77 290.8 152 100.0
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 5.5e-62 241.1 151 81.5
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.1e-61 239.2 153 81.0
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 1.8e-60 236.1 157 78.3
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 3.9e-60 235.0 152 80.9
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 3.9e-60 235.0 154 79.9
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 3.9e-60 235.0 157 77.1
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 5.1e-60 234.6 156 79.5
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 6.7e-60 234.2 132 89.4
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 1.5e-59 233.0 155 78.1
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 1.5e-59 233.0 157 78.3
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 1.9e-59 232.6 152 78.3
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 2.5e-59 232.3 151 79.5
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 2.5e-59 232.3 156 76.9
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 2.5e-59 232.3 151 78.8
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 5.7e-59 231.1 157 75.8
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 9.7e-59 230.3 181 72.9
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 1.3e-58 229.9 152 77.6
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 1.3e-58 229.9 151 79.5
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 2.2e-58 229.2 157 78.3
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 2.8e-58 228.8 154 79.2
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 2.8e-58 228.8 154 78.6
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 2.8e-58 228.8 155 78.1
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 6.3e-58 227.6 148 76.4
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 6.3e-58 227.6 147 79.6
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 8.2e-58 227.3 149 79.9
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 8.2e-58 227.3 151 78.8
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 1.1e-57 226.9 151 76.8
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 1.8e-57 226.1 156 77.6
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.8e-57 226.1 152 78.9
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 5.3e-57 224.6 158 77.8
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 9.0e-57 223.8 155 75.5
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 5.9e-56 221.1 155 72.3
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 5.9e-56 221.1 156 74.4
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 7.7e-56 220.7 152 75.0
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 1.0e-55 220.3 154 74.7
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 1.3e-55 219.9 156 73.7
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 1.7e-55 219.5 155 73.5
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 2.9e-55 218.8 154 75.3
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 2.9e-55 218.8 154 76.0
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 3.8e-55 218.4 149 75.2
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 6.5e-55 217.6 156 75.6
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 1.1e-54 216.9 154 75.3
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 1.4e-54 216.5 154 75.3
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 1.4e-54 216.5 150 74.0
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 1.9e-54 216.1 177 68.4
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 1.9e-54 216.1 162 71.6
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 5.5e-54 214.5 156 73.1
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 1.2e-53 213.4 155 74.2
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 2.1e-53 212.6 151 70.9
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 6.1e-53 211.1 156 73.1
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 1.4e-52 209.9 154 74.0
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 1.8e-52 209.5 155 72.3
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 1.8e-52 209.5 129 85.3
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 5.1e-52 208.0 152 75.0
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 2.6e-51 205.7 135 76.3
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 3.3e-51 205.3 149 71.1
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 4.4e-51 204.9 149 70.5
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 5.7e-51 204.5 155 72.3
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 5.7e-51 204.5 151 68.9
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 5.7e-51 204.5 155 71.6
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 7.4e-51 204.1 152 70.4
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 9.7e-51 203.8 155 69.0
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 1.7e-50 203.0 152 70.4
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 3.7e-50 201.8 153 69.3
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 4.8e-50 201.4 147 72.1
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 8.2e-50 200.7 153 69.9
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 8.2e-50 200.7 155 66.5
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 1.1e-49 200.3 153 69.9
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 2.4e-49 199.1 149 70.5
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 3.1e-49 198.7 121 84.3
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 6.9e-49 197.6 151 66.2
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 1.2e-48 196.8 155 64.5
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 3.4e-48 195.3 166 63.9
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 1.0e-47 193.7 149 70.5
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 2.2e-47 192.6 105 93.3
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 5.0e-47 191.4 151 70.2
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.1e-46 190.3 119 84.0
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 1.9e-46 189.5 105 91.4
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 3.6e-45 185.3 159 60.4
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.8e-44 183.0 143 69.2
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 2.3e-44 182.6 143 68.5
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 6.7e-44 181.0 105 87.6
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.5e-43 179.9 132 71.2
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 4.4e-43 178.3 105 84.8
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 4.1e-41 171.8 105 79.0
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 9.1e-41 170.6 133 65.4
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 1.6e-40 169.9 108 76.9
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 8.5e-39 164.1 131 67.2
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.4e-33 146.0 151 56.3
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 7.2e-30 134.4 76 85.5
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.0e-28 130.6 95 70.5
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 1.0e-28 130.6 79 81.0
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 8.8e-28 127.5 83 77.1
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 8.8e-28 127.5 83 77.1
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 3.1e-25 119.0 76 77.6
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 3.8e-23 112.1 73 75.3
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 4.0e-20 102.1 59 81.4
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 2.7e-16 89.4 158 39.9
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 8.6e-15 84.3 78 57.7
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 3.4e-11 72.4 144 36.8
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 6.4e-10 68.2 131 37.4
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 1.1e-06 57.4 42 66.7
CDE04G2918 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 7.3e-06 54.7 43 53.5


User provided reference genes

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