Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 3.5e-103 378.3 185 100.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 2.2e-57 226.1 153 74.5
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 8.4e-57 224.2 124 86.3
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 3.2e-56 222.2 124 85.5
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 7.1e-56 221.1 130 81.5
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 7.1e-56 221.1 124 85.5
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 9.3e-56 220.7 125 81.6
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.2e-55 220.3 126 81.0
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 1.2e-55 220.3 124 83.9
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 1.6e-55 219.9 125 84.0
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 2.1e-55 219.5 125 84.0
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 2.7e-55 219.2 123 83.7
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 4.6e-55 218.4 123 85.4
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 6.0e-55 218.0 124 83.1
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 6.0e-55 218.0 123 83.7
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 7.9e-55 217.6 124 83.9
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.0e-54 217.2 124 82.3
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 1.3e-54 216.9 123 82.1
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 1.3e-54 216.9 123 82.1
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.8e-54 216.5 123 83.7
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.8e-54 216.5 123 83.7
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 1.8e-54 216.5 124 82.3
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 1.8e-54 216.5 121 82.6
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 1.8e-54 216.5 124 83.1
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 2.3e-54 216.1 124 82.3
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 3.0e-54 215.7 143 75.5
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.0e-54 215.7 124 82.3
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 3.9e-54 215.3 124 83.1
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 3.9e-54 215.3 123 82.9
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 5.1e-54 214.9 124 83.9
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 5.1e-54 214.9 121 82.6
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 5.1e-54 214.9 127 81.1
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 6.7e-54 214.5 123 82.1
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 6.7e-54 214.5 124 80.6
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 6.7e-54 214.5 124 81.5
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 8.7e-54 214.2 123 80.5
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 8.7e-54 214.2 123 81.3
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 8.7e-54 214.2 124 84.7
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 8.7e-54 214.2 124 81.5
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 8.7e-54 214.2 123 80.5
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 8.7e-54 214.2 123 80.5
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.1e-53 213.8 124 81.5
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.1e-53 213.8 124 83.1
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.1e-53 213.8 127 78.0
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.1e-53 213.8 127 78.0
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 1.1e-53 213.8 147 68.7
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.1e-53 213.8 123 80.5
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 1.5e-53 213.4 124 83.9
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.5e-53 213.4 127 78.7
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.9e-53 213.0 124 81.5
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.9e-53 213.0 123 80.5
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.9e-53 213.0 123 79.7
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 2.5e-53 212.6 124 79.0
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 2.5e-53 212.6 124 80.6
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 2.5e-53 212.6 125 81.6
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 2.5e-53 212.6 125 83.2
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 2.5e-53 212.6 123 81.3
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 2.5e-53 212.6 124 84.7
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 4.3e-53 211.8 127 78.0
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 4.3e-53 211.8 124 80.6
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 4.3e-53 211.8 124 82.3
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 4.3e-53 211.8 124 80.6
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 5.7e-53 211.5 123 79.7
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 5.7e-53 211.5 123 81.3
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 7.4e-53 211.1 123 82.1
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 7.4e-53 211.1 124 81.5
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 9.6e-53 210.7 124 79.0
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 9.6e-53 210.7 124 83.9
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.6e-53 210.7 124 83.9
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.6e-53 210.7 124 83.9
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.6e-53 210.7 124 83.9
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.6e-53 210.7 124 83.9
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 9.6e-53 210.7 124 79.8
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 9.6e-53 210.7 122 82.0
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.3e-52 210.3 119 81.5
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 1.6e-52 209.9 124 82.3
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.6e-52 209.9 123 79.7
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 1.6e-52 209.9 130 76.2
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 2.1e-52 209.5 123 80.5
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 2.1e-52 209.5 123 78.9
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 2.1e-52 209.5 124 79.8
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 2.1e-52 209.5 123 79.7
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 2.8e-52 209.1 124 78.2
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 2.8e-52 209.1 124 79.8
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 2.8e-52 209.1 125 77.6
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 3.7e-52 208.8 130 75.4
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.7e-52 208.8 124 77.4
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 3.7e-52 208.8 123 80.5
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 3.7e-52 208.8 123 78.9
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 4.8e-52 208.4 124 77.4
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 4.8e-52 208.4 124 77.4
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 4.8e-52 208.4 123 81.3
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 4.8e-52 208.4 124 82.3
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 4.8e-52 208.4 124 81.5
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 4.8e-52 208.4 127 76.4
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 6.3e-52 208.0 124 77.4
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 6.3e-52 208.0 123 79.7
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 8.2e-52 207.6 124 77.4
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 8.2e-52 207.6 124 77.4
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 8.2e-52 207.6 124 77.4
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 8.2e-52 207.6 124 77.4
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 8.2e-52 207.6 124 77.4
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 8.2e-52 207.6 124 77.4
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 1.4e-51 206.8 124 78.2
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.4e-51 206.8 124 78.2
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 2.4e-51 206.1 123 78.9
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 3.1e-51 205.7 127 76.4
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.3e-51 204.9 127 75.6
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.5e-50 203.4 123 76.4
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 1.5e-50 203.4 124 76.6
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 2.0e-50 203.0 124 75.8
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 3.4e-50 202.2 128 77.3
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 4.5e-50 201.8 123 74.8
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 4.5e-50 201.8 124 75.0
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 4.5e-50 201.8 123 76.4
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 5.9e-50 201.4 122 79.5
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.0e-49 200.7 126 76.2
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.2e-49 199.5 116 79.3
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 2.2e-49 199.5 124 74.2
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 6.5e-49 198.0 124 75.8
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 2.5e-48 196.1 123 74.8
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 5.5e-48 194.9 112 83.9
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 1.6e-47 193.4 112 83.0
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 2.1e-47 193.0 115 78.3
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.7e-47 192.6 112 83.0
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 2.3e-46 189.5 110 83.6
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.1e-45 187.2 103 88.3
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 1.9e-45 186.4 107 82.2
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 2.5e-45 186.0 118 76.3
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.3e-45 185.7 124 71.8
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 9.7e-45 184.1 126 72.2
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.3e-44 183.7 107 80.4
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 6.3e-44 181.4 132 63.6
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 1.8e-43 179.9 115 76.5
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.4e-42 175.6 107 80.4
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 4.5e-42 175.3 133 63.9
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.7e-41 173.3 101 82.2
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 2.1e-39 166.4 119 65.5
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 4.6e-39 165.2 126 61.1
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 4.6e-39 165.2 133 64.7
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 4.6e-39 165.2 126 61.1
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.0e-38 164.1 125 66.4
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.8e-38 163.3 125 67.2
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.7e-38 161.4 85 85.9
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 4.4e-37 158.7 105 73.3
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.4e-35 152.9 98 75.5
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 4.5e-34 148.7 102 69.6
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 1.7e-33 146.7 82 80.5
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.1e-31 139.8 119 53.8
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 3.6e-31 139.0 123 56.1
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 6.7e-30 134.8 86 76.7
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 4.8e-28 128.6 122 54.1
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 2.1e-23 113.2 57 86.0
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.7e-23 112.1 110 54.5
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.0e-22 110.9 108 53.7
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 1.0e-22 110.9 82 57.3
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.3e-20 104.0 124 42.7
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 3.7e-20 102.4 104 49.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 8.2e-20 101.3 79 54.4
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 9.1e-19 97.8 62 77.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.0e-14 84.3 43 88.4
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 2.3e-09 66.6 35 85.7
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 7.2e-08 61.6 35 77.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.8e-06 57.0 50 54.0


User provided reference genes

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