Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 6.7e-69 263.8 130 100.0
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 1.1e-31 140.2 82 76.8
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.9e-31 139.4 80 81.2
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 7.3e-31 137.5 81 76.5
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 3.6e-30 135.2 80 76.2
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 3.6e-30 135.2 80 78.8
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 4.7e-30 134.8 80 77.5
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 4.7e-30 134.8 79 77.2
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 4.7e-30 134.8 80 75.0
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 6.2e-30 134.4 82 74.4
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 6.2e-30 134.4 80 77.5
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 8.1e-30 134.0 80 76.2
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 1.4e-29 133.3 82 73.2
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 2.3e-29 132.5 79 77.2
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 3.1e-29 132.1 80 77.5
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 3.1e-29 132.1 80 77.5
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 3.1e-29 132.1 80 75.0
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 3.1e-29 132.1 82 74.4
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 4.0e-29 131.7 79 75.9
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 4.0e-29 131.7 79 75.9
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 4.0e-29 131.7 80 72.5
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 4.0e-29 131.7 82 74.4
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 4.0e-29 131.7 80 73.8
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 5.2e-29 131.3 80 77.5
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 5.2e-29 131.3 79 77.2
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 5.2e-29 131.3 80 73.8
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 5.2e-29 131.3 82 74.4
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 5.2e-29 131.3 82 74.4
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 6.8e-29 131.0 90 68.9
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 6.8e-29 131.0 80 72.5
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 8.9e-29 130.6 89 69.7
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 8.9e-29 130.6 79 73.4
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 8.9e-29 130.6 79 73.4
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 8.9e-29 130.6 80 72.5
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 1.2e-28 130.2 80 73.8
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 1.2e-28 130.2 80 76.2
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 1.5e-28 129.8 89 67.4
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 1.5e-28 129.8 81 70.4
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 2.0e-28 129.4 82 70.7
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 2.0e-28 129.4 81 71.6
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 2.6e-28 129.0 90 67.8
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 4.4e-28 128.3 80 75.0
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 4.4e-28 128.3 90 67.8
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 4.4e-28 128.3 82 70.7
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 4.4e-28 128.3 100 64.0
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 4.4e-28 128.3 82 70.7
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 5.8e-28 127.9 82 69.5
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 5.8e-28 127.9 82 69.5
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 7.5e-28 127.5 90 66.7
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 7.5e-28 127.5 90 67.8
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 7.5e-28 127.5 90 67.8
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 7.5e-28 127.5 90 67.8
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 7.5e-28 127.5 80 72.5
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 7.5e-28 127.5 80 73.8
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 7.5e-28 127.5 80 73.8
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 9.9e-28 127.1 90 67.8
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 1.3e-27 126.7 90 67.8
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 1.3e-27 126.7 89 67.4
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 1.7e-27 126.3 82 68.3
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 1.7e-27 126.3 80 68.8
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 1.7e-27 126.3 81 71.6
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 2.2e-27 125.9 82 73.2
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 2.2e-27 125.9 90 66.7
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 2.2e-27 125.9 80 72.5
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 2.2e-27 125.9 82 68.3
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 2.2e-27 125.9 82 68.3
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.2e-27 125.9 82 68.3
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 2.2e-27 125.9 90 65.6
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 2.9e-27 125.6 80 71.2
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 3.7e-27 125.2 80 71.2
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 3.7e-27 125.2 82 67.1
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 4.9e-27 124.8 80 70.0
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 4.9e-27 124.8 80 68.8
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 6.4e-27 124.4 80 70.0
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 6.4e-27 124.4 79 68.4
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 8.3e-27 124.0 79 68.4
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 8.3e-27 124.0 80 72.5
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 8.3e-27 124.0 80 72.5
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 1.1e-26 123.6 90 64.4
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 1.4e-26 123.2 80 70.0
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 1.4e-26 123.2 80 70.0
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 1.9e-26 122.9 80 71.2
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 2.4e-26 122.5 74 73.0
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 3.2e-26 122.1 78 71.8
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 4.1e-26 121.7 79 70.9
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 7.1e-26 120.9 79 67.1
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 7.1e-26 120.9 80 67.5
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 9.2e-26 120.6 79 68.4
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 1.6e-25 119.8 79 65.8
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 2.1e-25 119.4 82 64.6
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 2.1e-25 119.4 78 66.7
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 3.5e-25 118.6 81 65.4
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 4.6e-25 118.2 82 67.1
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 7.8e-25 117.5 74 71.6
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 7.8e-25 117.5 92 63.0
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 1.7e-24 116.3 80 70.0
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 1.7e-24 116.3 96 59.4
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 2.3e-24 115.9 80 68.8
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 3.9e-24 115.2 82 67.1
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 1.1e-23 113.6 82 64.6
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 5.6e-23 111.3 83 65.1
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 2.8e-22 109.0 62 79.0
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 8.1e-22 107.5 113 50.4
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 1.4e-21 106.7 85 55.3
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 5.2e-21 104.8 62 77.4
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 1.2e-20 103.6 67 73.1
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 5.8e-20 101.3 69 65.2
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 5.6e-15 84.7 76 48.7
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 5.3e-13 78.2 83 43.4
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 7.6e-12 74.3 67 59.7
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 2.4e-10 69.3 43 74.4
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 1.2e-09 67.0 42 64.3
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 3.9e-08 62.0 46 65.2
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 5.6e-07 58.2 122 33.6
Phvul.002G134150 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 1.3e-06 57.0 33 78.8
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 1.6e-06 56.6 77 33.8
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 2.8e-06 55.8 79 45.6
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 2.8e-06 55.8 79 45.6


User provided reference genes

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