Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 1.4e-69 266.2 135 100.0
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 7.1e-45 184.1 138 71.0
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 2.1e-44 182.6 145 69.0
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 2.3e-43 179.1 144 68.1
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 7.3e-42 174.1 141 69.5
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 3.6e-41 171.8 136 67.6
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 8.1e-41 170.6 141 67.4
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 8.1e-41 170.6 136 66.2
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 8.9e-40 167.2 132 67.4
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 3.4e-39 165.2 134 68.7
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 3.4e-39 165.2 137 66.4
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 5.8e-39 164.5 138 68.8
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 5.8e-39 164.5 137 65.7
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.7e-38 162.9 133 64.7
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 4.9e-38 161.4 133 64.7
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 1.4e-37 159.8 138 62.3
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 3.2e-37 158.7 136 64.7
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 5.4e-37 157.9 132 64.4
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 7.1e-37 157.5 137 65.0
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 9.2e-37 157.1 133 63.2
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.2e-36 156.8 137 58.4
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.2e-36 156.8 136 62.5
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.6e-36 156.4 133 63.2
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 2.1e-36 156.0 133 63.2
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 2.7e-36 155.6 133 63.2
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 4.6e-36 154.8 133 63.2
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 4.6e-36 154.8 149 60.4
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 6.0e-36 154.5 136 61.8
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 7.8e-36 154.1 140 61.4
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 1.0e-35 153.7 130 64.6
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.7e-35 152.9 133 63.2
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.3e-35 152.5 132 60.6
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.3e-35 152.5 133 61.7
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 3.9e-35 151.8 137 60.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 6.6e-35 151.0 132 65.2
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 1.1e-34 150.2 132 59.1
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 1.1e-34 150.2 136 63.2
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.5e-34 149.8 136 62.5
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 1.5e-34 149.8 133 60.9
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 1.9e-34 149.4 133 60.9
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 2.5e-34 149.1 133 61.7
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 3.3e-34 148.7 126 61.9
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 3.3e-34 148.7 136 62.5
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 5.6e-34 147.9 132 61.4
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 5.6e-34 147.9 132 61.4
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 9.6e-34 147.1 131 62.6
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 9.6e-34 147.1 125 63.2
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 9.6e-34 147.1 131 61.8
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 9.6e-34 147.1 133 58.6
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 2.1e-33 146.0 132 57.6
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 2.1e-33 146.0 133 60.2
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 2.8e-33 145.6 136 59.6
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 3.6e-33 145.2 134 57.5
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 3.6e-33 145.2 133 60.2
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 8.1e-33 144.1 128 64.1
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 8.1e-33 144.1 128 64.1
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 1.1e-32 143.7 141 56.7
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 1.1e-32 143.7 128 64.1
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 1.4e-32 143.3 141 56.0
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.4e-32 143.3 135 59.3
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 2.4e-32 142.5 142 60.6
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 3.1e-32 142.1 133 58.6
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 4.0e-32 141.7 129 62.0
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 8.9e-32 140.6 132 56.1
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 8.9e-32 140.6 132 55.3
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 8.9e-32 140.6 132 56.1
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 8.9e-32 140.6 132 56.1
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 1.2e-31 140.2 134 58.2
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 9.9e-31 137.1 140 57.1
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.7e-30 136.3 131 60.3
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 4.9e-30 134.8 138 57.2
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 5.4e-29 131.3 141 52.5
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 5.4e-29 131.3 135 55.6
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 6.0e-28 127.9 141 53.9
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.0e-27 127.1 137 55.5
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.3e-27 126.7 136 53.7
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 3.9e-27 125.2 210 41.0
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 8.7e-27 124.0 127 53.5
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 1.5e-26 123.2 135 53.3
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.3e-26 122.1 125 53.6
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 7.3e-26 120.9 128 50.8
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 7.3e-26 120.9 127 48.8
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 9.6e-26 120.6 147 51.7
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 1.3e-25 120.2 127 53.5
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.8e-25 119.0 125 52.0
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 6.2e-25 117.9 122 54.9
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 4.0e-24 115.2 130 55.4
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 9.0e-24 114.0 79 69.6
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 2.6e-23 112.5 129 50.4
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 4.5e-23 111.7 132 47.7
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 1.3e-22 110.2 134 46.3
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 1.6e-20 103.2 152 46.1
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 2.7e-20 102.4 76 67.1
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 3.5e-20 102.1 126 48.4
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 6.0e-20 101.3 128 49.2
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 2.3e-19 99.4 76 60.5
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 5.1e-19 98.2 81 61.7
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 5.1e-19 98.2 132 50.8
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 8.7e-19 97.4 218 36.2
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 8.7e-19 97.4 72 69.4
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 8.7e-19 97.4 125 51.2
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 1.5e-18 96.7 129 43.4
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 1.5e-18 96.7 125 44.8
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.3e-18 95.5 109 45.9
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 3.3e-18 95.5 120 50.0
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.8e-17 92.4 109 45.9
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 2.0e-15 86.3 104 49.0
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 9.9e-15 84.0 136 42.6
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 4.3e-10 68.6 122 36.9
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 7.4e-10 67.8 128 36.7
Actinidia18153 Actinidia chinensis HOM05D003443 ORTHO05D008640 2.4e-08 62.8 61 59.0
Ah.16g110160 Amaranthus hybridus HOM05D003443 ORTHO05D008640 2.4e-08 62.8 58 58.6


User provided reference genes

Program Settings