Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 9.0e-90 333.6 169 100.0
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 1.3e-64 250.0 167 74.3
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 2.9e-64 248.8 153 81.0
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 3.8e-64 248.4 153 81.0
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 9.4e-63 243.8 163 76.1
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 2.7e-62 242.3 166 74.1
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 1.0e-61 240.4 149 79.9
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 1.4e-61 240.0 155 78.7
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 3.0e-61 238.8 166 75.3
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 2.6e-60 235.7 151 79.5
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 3.3e-60 235.3 154 79.2
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 7.4e-60 234.2 148 78.4
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 7.4e-60 234.2 143 81.8
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 9.7e-60 233.8 153 77.8
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 1.3e-59 233.4 152 80.9
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 1.3e-59 233.4 163 73.0
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 2.2e-59 232.6 143 81.8
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 2.8e-59 232.3 139 82.0
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 3.7e-59 231.9 162 71.6
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 3.7e-59 231.9 153 76.5
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 3.7e-59 231.9 153 77.8
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 4.8e-59 231.5 149 77.2
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 1.8e-58 229.6 151 74.2
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 1.8e-58 229.6 159 74.2
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 4.1e-58 228.4 151 74.2
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 4.1e-58 228.4 142 77.5
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 4.1e-58 228.4 147 75.5
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 5.3e-58 228.0 151 73.5
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 7.0e-58 227.6 144 75.0
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 9.1e-58 227.3 143 79.7
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 9.1e-58 227.3 143 79.7
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 9.1e-58 227.3 149 77.9
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 1.6e-57 226.5 155 73.5
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 1.6e-57 226.5 147 74.8
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 2.0e-57 226.1 142 81.0
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 2.0e-57 226.1 142 76.1
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 2.6e-57 225.7 141 78.7
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 5.0e-56 221.5 146 77.4
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 5.0e-56 221.5 176 67.0
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 6.5e-56 221.1 142 76.1
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 1.1e-55 220.3 170 66.5
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 1.1e-55 220.3 152 75.0
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 1.9e-55 219.5 151 70.2
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 2.5e-55 219.2 165 67.3
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 7.2e-55 217.6 178 62.9
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 1.2e-54 216.9 150 71.3
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 1.2e-54 216.9 147 72.8
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 1.6e-54 216.5 155 67.7
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 2.1e-54 216.1 167 64.7
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 2.1e-54 216.1 155 67.1
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 2.7e-54 215.7 155 68.4
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 4.7e-54 214.9 167 64.1
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 1.8e-53 213.0 144 70.8
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 4.0e-53 211.8 157 71.3
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 6.7e-53 211.1 164 67.7
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 1.2e-52 210.3 153 68.6
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 2.0e-52 209.5 144 70.1
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 2.6e-52 209.1 166 66.3
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 3.3e-52 208.8 165 66.7
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 1.7e-51 206.5 146 69.9
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 3.7e-51 205.3 157 67.5
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 3.7e-51 205.3 142 71.8
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 3.7e-51 205.3 149 67.1
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 1.1e-50 203.8 143 72.7
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 1.1e-50 203.8 177 59.3
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 1.8e-50 203.0 164 61.6
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 1.6e-49 199.9 186 58.1
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 2.0e-49 199.5 125 80.0
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 2.0e-49 199.5 150 66.0
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 3.5e-49 198.7 142 69.0
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 3.5e-49 198.7 142 69.0
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 4.5e-49 198.4 164 64.0
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 4.5e-49 198.4 226 54.4
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.3e-48 196.8 151 66.9
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 1.7e-48 196.4 169 59.2
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 3.8e-48 195.3 165 60.6
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 6.5e-48 194.5 149 67.1
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 1.1e-47 193.7 166 60.2
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 1.5e-47 193.4 154 65.6
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 2.5e-47 192.6 142 66.2
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 2.5e-47 192.6 142 66.2
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 4.2e-47 191.8 166 60.2
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 9.4e-47 190.7 124 77.4
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 1.2e-46 190.3 152 63.8
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 4.7e-46 188.3 188 55.9
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 8.0e-46 187.6 207 52.7
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 1.4e-45 186.8 168 59.5
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 2.3e-45 186.0 124 74.2
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 4.0e-45 185.3 142 66.9
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 2.8e-43 179.1 168 59.5
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 1.8e-42 176.4 142 60.6
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 2.0e-41 172.9 151 57.6
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 1.5e-39 166.8 110 70.9
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 1.1e-34 150.6 124 66.1
DCAR_028201 Daucus carota HOM05D006959 ORTHO05D008808 2.3e-32 142.9 173 48.0
Psat6g040840 Pisum sativum HOM05D006959 ORTHO05D008808 2.8e-30 136.0 94 72.3
TPR.G879 Trifolium pratense HOM05D006959 ORTHO05D008808 6.1e-30 134.8 79 79.7
Prupe.1G487500 Prunus persica HOM05D006959 ORTHO05D008808 4.6e-25 118.6 104 60.6
RcHm_v2.0_Chr6g0296961 Rosa chinensis HOM05D006959 ORTHO05D008808 1.5e-23 113.6 71 73.2
Mapoly0050s0106 Marchantia polymorpha HOM05D006959 ORTHO05D008808 2.8e-22 109.4 100 53.0
CSS0009415 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 1.4e-21 107.1 72 73.6
CSS0036249 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 6.8e-21 104.8 72 72.2
SGA_v2.0_scaffold52G18911 Striga asiatica HOM05D006959 ORTHO05D008808 6.8e-21 104.8 70 75.7
Cre12.g510034 Chlamydomonas reinhardtii HOM05D006959 ORTHO05D008808 3.4e-20 102.4 107 51.4
Sc26g0002850 Simmondsia chinensis HOM05D006959 ORTHO05D008808 6.4e-19 98.2 70 68.6
SEGI_05118 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 7.0e-18 94.7 78 52.6
SEGI_04582 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 2.7e-17 92.8 78 53.8
RcHm_v2.0_Chr6g0296981 Rosa chinensis HOM05D006959 ORTHO05D008808 3.9e-16 89.0 53 84.9
FAN24G1784 Fragaria x ananassa HOM05D006959 ORTHO05D008808 4.4e-12 75.5 47 74.5
TPR.G23301 Trifolium pratense HOM05D003946 ORTHO05D004485 1.5e-07 60.5 129 30.2
CBR_g52628 Chara braunii HOM05D006959 ORTHO05D008808 3.3e-07 59.3 62 48.4
Carub.0006s2688 Capsella rubella HOM05D005920 ORTHO05D007211 5.6e-07 58.5 125 28.0
Phvul.008G125199 Phaseolus vulgaris HOM05D003946 ORTHO05D004485 5.6e-07 58.5 113 29.2
VMungo1383G2940 Vigna mungo HOM05D003946 ORTHO05D004485 7.3e-07 58.2 113 29.2
Lj4g0012280 Lotus japonicus HOM05D003946 ORTHO05D004485 1.6e-06 57.0 113 29.2
MSTRG.1445 Avicennia marina HOM05D005920 ORTHO05D007211 2.1e-06 56.6 132 28.0
Lj4A625G10 Lonicera japonica HOM05D005920 ORTHO05D007211 2.1e-06 56.6 119 26.9
Medtr7g059150 Medicago truncatula HOM05D003946 ORTHO05D004485 2.1e-06 56.6 129 29.5
FAN08G3479 Fragaria x ananassa HOM05D006959 ORTHO05D008808 3.6e-06 55.8 58 58.6
Nn2g14258 Nelumbo nucifera HOM05D003946 ORTHO05D004485 3.6e-06 55.8 114 30.7
Ciclev10001211m.g Citrus clementina HOM05D005920 ORTHO05D007211 6.2e-06 55.1 125 24.8
BcaB05g23941 Brassica carinata HOM05D005920 ORTHO05D007211 8.1e-06 54.7 138 26.1
Ca_01517_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 8.1e-06 54.7 129 28.7


User provided reference genes

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