Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.5e-206 722.6 374 100.0
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 3.1e-151 538.9 367 75.5
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.2e-148 528.5 367 73.6
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.0e-146 523.9 367 73.0
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 1.0e-146 523.9 368 74.5
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 2.3e-146 522.7 369 73.2
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.3e-144 516.9 366 71.9
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 5.3e-143 511.5 372 70.7
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 4.5e-142 508.4 379 69.1
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.0e-141 507.3 370 71.4
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 2.9e-141 505.8 372 70.4
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 3.8e-141 505.4 370 70.8
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 5.0e-141 505.0 370 70.8
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 3.2e-140 502.3 372 71.8
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 4.2e-140 501.9 372 70.2
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 2.7e-139 499.2 372 69.4
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 6.8e-138 494.6 374 69.0
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 1.5e-137 493.4 368 69.6
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 1.0e-133 480.7 368 65.5
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 3.8e-133 478.8 371 69.8
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 8.6e-133 477.6 374 67.1
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 8.6e-133 477.6 371 69.3
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 2.1e-131 473.0 366 65.8
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 2.8e-131 472.6 371 64.7
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 6.1e-131 471.5 373 67.3
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.8e-130 469.9 376 65.4
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 2.3e-130 469.5 372 66.7
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 3.0e-130 469.2 372 64.5
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 4.0e-130 468.8 371 65.0
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 5.2e-130 468.4 370 66.8
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 5.2e-130 468.4 371 66.6
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 2.6e-129 466.1 372 66.4
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 1.3e-128 463.8 371 64.4
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.7e-128 463.4 370 63.0
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 2.2e-128 463.0 366 65.3
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 4.9e-128 461.8 372 66.1
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 2.4e-127 459.5 372 64.2
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 2.4e-127 459.5 372 64.2
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 3.1e-127 459.1 372 65.3
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 4.1e-127 458.8 366 63.7
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 9.2e-127 457.6 371 66.8
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 9.2e-127 457.6 370 65.9
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 1.2e-126 457.2 368 64.9
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 2.0e-126 456.4 371 64.7
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 4.5e-126 455.3 370 65.9
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 4.5e-126 455.3 366 63.4
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 5.9e-126 454.9 325 73.2
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 7.8e-126 454.5 371 64.2
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 1.0e-125 454.1 373 64.9
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 2.9e-125 452.6 366 62.8
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 8.6e-125 451.1 371 66.3
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 1.1e-124 450.7 364 62.9
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.1e-124 450.7 366 63.1
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 1.9e-124 449.9 367 64.6
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 2.5e-124 449.5 373 65.1
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 5.6e-124 448.4 366 62.3
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 6.1e-123 444.9 366 64.5
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 8.0e-123 444.5 373 64.3
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.3e-122 443.0 376 63.3
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 1.2e-121 440.7 371 62.5
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 1.5e-121 440.3 331 67.7
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 1.5e-121 440.3 374 63.4
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 4.4e-121 438.7 382 59.9
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 1.3e-120 437.2 410 58.3
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 1.7e-120 436.8 372 62.9
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 2.2e-120 436.4 373 61.9
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 2.9e-120 436.0 371 65.0
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 3.7e-120 435.6 370 63.8
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 8.3e-120 434.5 369 62.9
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 1.9e-119 433.3 371 64.7
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 3.2e-119 432.6 366 61.7
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 3.2e-119 432.6 370 64.6
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.7e-117 426.8 316 71.5
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 8.6e-117 424.5 411 56.7
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 8.6e-117 424.5 369 60.7
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 1.1e-116 424.1 375 61.1
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.1e-116 424.1 368 62.0
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 3.3e-116 422.5 369 60.4
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 3.6e-115 419.1 370 60.0
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 1.1e-114 417.5 378 59.0
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.4e-114 417.2 367 63.2
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.1e-114 416.0 383 58.7
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 4.0e-114 415.6 386 58.3
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 6.8e-114 414.8 368 59.5
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.5e-113 413.7 368 60.6
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 4.4e-113 412.1 368 60.3
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 9.8e-113 411.0 392 55.9
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 2.9e-112 409.5 369 59.1
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 3.7e-112 409.1 361 62.9
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 8.3e-112 407.9 368 60.1
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 2.4e-111 406.4 371 58.8
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 2.4e-111 406.4 378 58.5
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 5.4e-111 405.2 370 59.2
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.6e-110 403.7 316 69.6
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 3.0e-109 399.4 370 58.4
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 3.0e-109 399.4 368 58.7
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 6.6e-109 398.3 486 49.4
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 1.5e-108 397.1 370 58.1
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 7.3e-108 394.8 368 58.4
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 9.5e-108 394.4 368 59.5
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 3.6e-107 392.5 369 58.3
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.6e-107 392.5 368 57.9
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 1.4e-106 390.6 369 58.0
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 1.8e-106 390.2 372 58.1
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 4.0e-106 389.0 356 59.6
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 4.0e-106 389.0 508 47.0
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 6.8e-106 388.3 568 45.6
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 6.8e-106 388.3 375 56.5
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 2.0e-105 386.7 365 58.1
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 2.0e-105 386.7 407 53.3
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 1.7e-104 383.6 379 56.7
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 2.9e-104 382.9 372 56.7
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 8.3e-104 381.3 355 58.9
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 7.1e-103 378.3 403 52.9
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 9.2e-103 377.9 295 65.8
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 9.2e-103 377.9 286 65.7
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-102 377.1 355 58.3
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 4.6e-102 375.6 359 57.1
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 4.6e-102 375.6 366 54.1
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 6.0e-102 375.2 313 63.3
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.7e-101 373.6 356 57.6
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 3.6e-99 365.9 370 55.7
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 3.6e-99 365.9 373 53.4
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 8.1e-99 364.8 317 61.2
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 3.8e-96 355.9 371 51.8
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.1e-95 354.4 315 59.7
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 2.1e-94 350.1 375 51.7
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 2.5e-92 343.2 314 60.5
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 2.0e-89 333.6 477 42.8
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.8e-86 321.6 210 77.1
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 8.1e-83 311.6 166 98.2
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 2.6e-81 306.6 208 72.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 3.8e-80 302.8 302 56.0
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 5.1e-77 292.4 300 56.0
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 5.8e-73 278.9 228 61.4
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 9.9e-73 278.1 210 69.0
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.7e-72 277.3 315 50.5
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 1.7e-72 277.3 208 65.9
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.1e-71 274.6 164 82.9
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 2.5e-71 273.5 317 48.3
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.3e-71 271.6 205 70.2
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.0e-70 268.9 205 69.8
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.3e-67 261.2 162 79.0
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 8.2e-67 258.5 165 77.0
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.6e-65 253.4 169 75.7
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 4.5e-65 252.7 169 75.7
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 5.8e-65 252.3 169 75.1
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 1.7e-64 250.8 202 66.8
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 3.8e-64 249.6 376 39.4
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 4.2e-63 246.1 172 72.7
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 2.2e-59 233.8 169 72.2
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 5.3e-58 229.2 376 40.4
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.9e-58 228.8 189 66.7
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.5e-57 227.6 383 39.2
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 2.2e-56 223.8 343 39.4
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 1.4e-55 221.1 284 48.2
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 2.3e-53 213.8 368 37.0
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 3.0e-53 213.4 378 36.5
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 3.9e-53 213.0 155 68.4
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 6.7e-53 212.2 382 35.9
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 3.6e-46 189.9 204 49.0
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 7.9e-46 188.7 373 33.0
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.7e-45 185.7 110 85.5
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.8e-45 185.3 152 66.4
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.0e-44 184.1 130 70.8
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 1.8e-42 177.6 123 69.1
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 1.1e-39 168.3 257 42.0
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.1e-36 158.3 157 51.0
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 9.7e-36 155.2 157 50.3
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 5.9e-33 146.0 132 54.5
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 1.9e-31 141.0 173 48.0
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 3.6e-30 136.7 134 52.2
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 3.1e-26 123.6 137 51.8
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 4.5e-25 119.8 141 51.1
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.1e-18 98.6 261 29.5
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 4.1e-18 96.7 307 29.3
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 6.1e-06 56.2 198 27.3


User provided reference genes

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