Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 3.6e-115 418.3 216 100.0
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.1e-28 131.0 169 48.5
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 3.6e-27 125.9 176 45.5
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.4e-26 123.2 175 45.7
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.2e-25 120.9 165 45.5
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 2.0e-25 120.2 165 44.2
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 3.4e-25 119.4 193 41.5
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 1.3e-24 117.5 169 47.9
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 2.2e-24 116.7 172 43.6
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 2.9e-24 116.3 168 44.6
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 1.4e-23 114.0 172 43.6
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 2.1e-22 110.2 127 49.6
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 3.5e-22 109.4 174 45.4
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 3.9e-21 105.9 149 43.6
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 8.7e-21 104.8 161 41.0
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 8.7e-21 104.8 168 40.5
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.9e-20 103.6 156 41.0
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 4.3e-20 102.4 156 41.7
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 9.6e-20 101.3 131 46.6
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.8e-19 99.8 173 40.5
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 2.8e-19 99.8 156 41.0
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 3.7e-19 99.4 113 52.2
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 6.2e-19 98.6 122 44.3
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 6.2e-19 98.6 173 39.9
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 1.1e-18 97.8 86 59.3
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.8e-18 97.1 103 51.5
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.8e-18 97.1 113 44.2
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.4e-18 96.7 172 39.5
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 3.1e-18 96.3 95 49.5
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 3.1e-18 96.3 148 41.2
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 3.1e-18 96.3 138 42.8
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 4.0e-18 95.9 98 53.1
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 4.0e-18 95.9 151 38.4
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.0e-18 95.9 128 46.1
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 5.3e-18 95.5 115 43.5
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 6.9e-18 95.1 116 44.0
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 9.0e-18 94.7 139 39.6
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 9.0e-18 94.7 155 36.8
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 1.2e-17 94.4 100 50.0
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.0e-17 93.6 121 42.1
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 3.4e-17 92.8 134 40.3
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 7.6e-17 91.7 163 41.1
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 1.3e-16 90.9 74 56.8
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 4.9e-16 89.0 104 47.1
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.1e-15 87.8 115 45.2
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.9e-15 87.0 164 40.2
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 3.2e-15 86.3 93 47.3
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 5.5e-15 85.5 180 36.7
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 1.6e-14 84.0 126 42.1
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 6.0e-14 82.0 160 35.0
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 6.0e-14 82.0 87 49.4
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 7.9e-14 81.6 163 41.1
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 2.3e-13 80.1 115 39.1
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 2.3e-13 80.1 102 43.1
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 3.9e-13 79.3 131 38.9
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 3.9e-13 79.3 89 48.3
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 5.1e-13 79.0 109 36.7
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 5.1e-13 79.0 156 38.5
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 8.7e-13 78.2 166 34.9
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 1.5e-12 77.4 156 34.6
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 3.3e-12 76.3 108 36.1
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 3.3e-12 76.3 160 33.1
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 1.6e-11 73.9 89 44.9
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 2.1e-11 73.6 95 45.3
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 3.7e-11 72.8 87 39.1
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 6.3e-11 72.0 104 38.5
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.2e-11 71.6 100 39.0
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 1.1e-10 71.2 158 31.6
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 3.1e-10 69.7 94 42.6
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 3.1e-10 69.7 168 35.1
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 3.1e-10 69.7 105 40.0
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 5.3e-10 68.9 135 34.1
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 6.9e-10 68.6 97 42.3
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 6.9e-10 68.6 85 41.2
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 9.0e-10 68.2 99 42.4
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 2.0e-09 67.0 155 33.5
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 4.5e-09 65.9 96 40.6
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 5.9e-09 65.5 179 32.4
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 7.6e-09 65.1 106 37.7
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 1.0e-08 64.7 66 48.5
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.2e-08 63.5 89 38.2
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.9e-08 63.2 89 38.2
Hund02541 Selenicereus undatus HOM05D007643 ORTHO05D007801 2.9e-08 63.2 214 29.9
Sed0026794 Sechium edule HOM05D007643 ORTHO05D007801 5.0e-08 62.4 135 35.6
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 6.5e-08 62.0 50 58.0
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 8.5e-08 61.6 66 42.4
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 1.1e-07 61.2 96 38.5
Ah.02g114340 Amaranthus hybridus HOM05D007643 ORTHO05D007801 1.4e-07 60.8 130 34.6
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 2.5e-07 60.1 118 34.7
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 2.5e-07 60.1 118 34.7
Haze_18546 Corylus avellana HOM05D007643 ORTHO05D007801 7.9e-06 55.1 67 46.3


User provided reference genes

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