Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008152001 Vitis vinifera HOM05D004085 ORTHO05D005189 8.7e-187 656.8 317 100.0
TAR629G1999 Trochodendron aralioides HOM05D004085 ORTHO05D005189 1.0e-150 537.0 315 80.6
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 1.1e-149 533.5 315 77.8
CSS0028863 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 9.4e-149 530.4 315 79.7
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 9.4e-149 530.4 315 79.0
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 1.4e-147 526.6 319 79.0
Dinv34021 Davidia involucrata HOM05D004085 ORTHO05D005189 3.0e-147 525.4 317 77.9
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 2.0e-146 522.7 315 76.8
DCAR_011575 Daucus carota HOM05D004085 ORTHO05D005189 2.0e-146 522.7 316 76.6
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 2.4e-144 515.8 316 75.6
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 2.4e-144 515.8 315 75.2
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 5.4e-144 514.6 316 75.6
Rhsim09G0122200 Rhododendron simsii HOM05D004085 ORTHO05D005189 1.2e-143 513.5 315 75.6
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 2.0e-143 512.7 320 75.0
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 2.7e-143 512.3 315 74.6
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 1.0e-142 510.4 318 75.5
Hma1.2p1_0428F.1_g150850 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 1.7e-142 509.6 317 75.4
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 1.7e-142 509.6 317 74.8
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 2.2e-142 509.2 316 75.3
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 2.9e-142 508.8 318 74.5
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 6.5e-142 507.7 317 74.1
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 1.9e-141 506.1 315 75.2
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 1.9e-141 506.1 317 74.4
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.9e-141 506.1 315 74.6
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 3.2e-141 505.4 323 74.6
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 5.5e-141 504.6 315 72.7
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 5.5e-141 504.6 317 73.8
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 5.5e-141 504.6 315 74.0
Thecc.02G322800 Theobroma cacao HOM05D004085 ORTHO05D005189 7.2e-141 504.2 316 74.1
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 1.2e-140 503.4 316 74.1
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 1.2e-140 503.4 322 72.4
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 1.2e-140 503.4 315 74.3
Potri.015G048700 Populus trichocarpa HOM05D004085 ORTHO05D005189 2.1e-140 502.7 315 74.6
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 3.6e-140 501.9 318 74.8
PGR102G0161 Punica granatum HOM05D004085 ORTHO05D005189 4.7e-140 501.5 317 74.8
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 6.1e-140 501.1 317 73.2
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 8.0e-140 500.7 315 73.0
ATR0691G189 Amborella trichopoda HOM05D004085 ORTHO05D005189 1.8e-139 499.6 317 73.5
HanXRQChr05g0157451 Helianthus annuus HOM05D004085 ORTHO05D005189 2.3e-139 499.2 315 74.3
ECA246G2852 Erigeron canadensis HOM05D004085 ORTHO05D005189 3.0e-139 498.8 315 74.9
ECA233G2807 Erigeron canadensis HOM05D004085 ORTHO05D005189 5.2e-139 498.0 317 73.2
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 1.5e-138 496.5 323 74.0
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 2.0e-138 496.1 320 73.1
Ciclev10032152m.g Citrus clementina HOM05D004085 ORTHO05D005189 2.6e-138 495.7 316 73.7
Lsat_1_v5_gn_5_23401 Lactuca sativa HOM05D004085 ORTHO05D005189 2.6e-138 495.7 315 74.0
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 9.8e-138 493.8 316 71.8
Sabra15G0078600 Salix brachista HOM05D004085 ORTHO05D005189 1.3e-137 493.4 315 74.3
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 2.2e-137 492.7 316 71.2
CSS0006421 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 3.7e-137 491.9 315 74.6
Nitab4.5_0001071g0010 Nicotiana tabacum HOM05D004085 ORTHO05D005189 3.7e-137 491.9 316 70.9
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 6.3e-137 491.1 319 72.1
Gohir.D02G131700 Gossypium hirsutum HOM05D004085 ORTHO05D005189 6.3e-137 491.1 319 72.7
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 6.3e-137 491.1 319 72.7
Haze_11859 Corylus avellana HOM05D004085 ORTHO05D005189 1.1e-136 490.3 371 65.8
Peaxi162Scf00873g00113 Petunia axillaris HOM05D004085 ORTHO05D005189 1.1e-136 490.3 320 70.9
Gohir.D11G037500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 3.1e-136 488.8 315 71.4
Gorai.007G040300 Gossypium raimondii HOM05D004085 ORTHO05D005189 3.1e-136 488.8 315 71.4
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 4.1e-136 488.4 318 70.4
Lj3A1027G87 Lonicera japonica HOM05D004085 ORTHO05D005189 5.4e-136 488.0 367 64.0
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 5.4e-136 488.0 318 70.8
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 7.0e-136 487.6 303 75.9
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 1.2e-135 486.9 318 71.4
Sc14g0007770 Simmondsia chinensis HOM05D004085 ORTHO05D005189 1.2e-135 486.9 316 71.8
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 1.6e-135 486.5 318 71.7
HanXRQChr12g0365061 Helianthus annuus HOM05D004085 ORTHO05D005189 1.3e-134 483.4 317 70.7
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 2.9e-134 482.3 320 71.2
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 2.9e-134 482.3 318 69.8
Sed0007813 Sechium edule HOM05D004085 ORTHO05D005189 2.9e-134 482.3 322 71.1
Nitab4.5_0000591g0050 Nicotiana tabacum HOM05D004085 ORTHO05D005189 3.8e-134 481.9 314 70.1
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 3.8e-134 481.9 318 70.8
Manes.06G081100 Manihot esculenta HOM05D004085 ORTHO05D005189 8.6e-134 480.7 318 72.6
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 7.3e-133 477.6 318 70.1
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 9.5e-133 477.2 319 69.9
CDE01G0369 Ceratophyllum demersum HOM05D004085 ORTHO05D005189 1.2e-132 476.9 317 70.7
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 1.6e-132 476.5 315 68.9
THA.LOC104805212 Tarenaya hassleriana HOM05D004085 ORTHO05D005189 2.1e-132 476.1 319 69.9
Aa31LG2G6920 Aethionema arabicum HOM05D004085 ORTHO05D005189 1.4e-131 473.4 331 66.5
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 1.4e-131 473.4 340 66.2
Peaxi162Scf00013g00834 Petunia axillaris HOM05D004085 ORTHO05D005189 1.8e-131 473.0 307 72.6
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 2.3e-131 472.6 314 70.1
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 5.2e-131 471.5 319 69.9
AL3G42500 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 6.8e-131 471.1 315 68.9
Cpa.g.sc1.168 Carica papaya HOM05D004085 ORTHO05D005189 6.8e-131 471.1 317 69.7
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 6.8e-131 471.1 317 71.0
AL5G13590 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 1.5e-130 469.9 316 68.7
Carub.0005s0294 Capsella rubella HOM05D004085 ORTHO05D005189 2.0e-130 469.5 316 69.0
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 2.6e-130 469.2 317 70.7
MSTRG.7728 Avicennia marina HOM05D004085 ORTHO05D005189 4.4e-130 468.4 317 70.7
COL.COLO4_27493 Corchorus olitorius HOM05D004085 ORTHO05D005189 4.4e-130 468.4 292 72.6
BcaC06g31165 Brassica carinata HOM05D004085 ORTHO05D005189 2.2e-129 466.1 316 68.7
AT2G03800 Arabidopsis thaliana HOM05D004085 ORTHO05D005189 2.9e-129 465.7 316 68.7
Nitab4.5_0002449g0030 Nicotiana tabacum HOM05D004085 ORTHO05D005189 4.9e-129 464.9 317 70.0
BcaC06g31143 Brassica carinata HOM05D004085 ORTHO05D005189 4.1e-128 461.8 316 68.4
C07p34240 Brassica napus HOM05D004085 ORTHO05D005189 1.2e-127 460.3 316 68.0
BolC7t43952H Brassica oleracea HOM05D004085 ORTHO05D005189 1.2e-127 460.3 316 68.0
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.2e-127 460.3 315 69.8
BcaC03g17242 Brassica carinata HOM05D004085 ORTHO05D005189 1.6e-127 459.9 316 68.4
MSTRG.779 Avicennia marina HOM05D004085 ORTHO05D005189 2.7e-127 459.1 318 70.1
Thhalv10004640m.g Eutrema salsugineum HOM05D004085 ORTHO05D005189 2.7e-127 459.1 316 67.4
A02p33630 Brassica napus HOM05D004085 ORTHO05D005189 3.5e-127 458.8 316 68.0
BolC2t11263H Brassica oleracea HOM05D004085 ORTHO05D005189 4.6e-127 458.4 316 68.0
CARHR146210 Cardamine hirsuta HOM05D004085 ORTHO05D005189 4.6e-127 458.4 316 67.4
Lsat_1_v5_gn_8_36601 Lactuca sativa HOM05D004085 ORTHO05D005189 7.8e-127 457.6 317 69.4
Os08g0339200 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 1.0e-126 457.2 320 68.4
Duzib248G1362 Durio zibethinus HOM05D004085 ORTHO05D005189 1.3e-126 456.8 316 69.9
Sp2g14620 Schrenkiella parvula HOM05D004085 ORTHO05D005189 3.0e-126 455.7 318 67.0
Zm00001eb276680 Zea mays HOM05D004085 ORTHO05D005189 3.0e-126 455.7 321 68.5
A06p42850 Brassica napus HOM05D004085 ORTHO05D005189 3.9e-126 455.3 316 67.4
BraA06t27197Z Brassica rapa HOM05D004085 ORTHO05D005189 8.6e-126 454.1 316 67.4
C02p51780 Brassica napus HOM05D004085 ORTHO05D005189 1.1e-125 453.8 316 67.4
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 1.1e-125 453.8 316 66.1
BcaB07g30279 Brassica carinata HOM05D004085 ORTHO05D005189 1.9e-125 453.0 316 67.4
SalBow2G2246 Salvia bowleyana HOM05D004085 ORTHO05D005189 1.2e-124 450.3 317 65.9
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 2.1e-124 449.5 266 78.9
CSS0030921 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.8e-124 449.1 317 68.8
Hund25155 Selenicereus undatus HOM05D004085 ORTHO05D005189 3.6e-124 448.7 389 57.8
EL10Ac6g14673 Beta vulgaris HOM05D004085 ORTHO05D005189 1.2e-122 443.7 335 63.0
Lj5A137T62 Lonicera japonica HOM05D004085 ORTHO05D005189 5.8e-122 441.4 289 75.1
Cpa.g.sc3.236 Carica papaya HOM05D004085 ORTHO05D005189 6.4e-121 438.0 336 64.0
AUR62007873 Chenopodium quinoa HOM05D004085 ORTHO05D005189 1.4e-120 436.8 315 65.1
FAN07G2517 Fragaria x ananassa HOM05D004085 ORTHO05D005189 2.4e-120 436.0 406 56.7
AUR62003058 Chenopodium quinoa HOM05D004085 ORTHO05D005189 2.7e-119 432.6 315 63.8
Mapoly0007s0171 Marchantia polymorpha HOM05D004085 ORTHO05D005189 3.5e-119 432.2 324 63.3
HPP92_003714 Vanilla planifolia HOM05D004085 ORTHO05D005189 1.7e-118 429.9 291 70.4
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 3.9e-118 428.7 315 65.1
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 7.5e-114 414.5 317 64.0
SHI14335 Sapria himalayana HOM05D004085 ORTHO05D005189 5.1e-110 401.7 333 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2928 Anthoceros agrestis HOM05D004085 ORTHO05D005189 3.3e-109 399.1 317 60.3
Migut.L01162 Erythranthe guttata HOM05D004085 ORTHO05D005189 3.3e-109 399.1 284 66.9
Pp3c4_31680 Physcomitrium patens HOM05D004085 ORTHO05D005189 1.5e-106 390.2 317 59.6
SMO146G0350 Selaginella moellendorffii HOM05D004085 ORTHO05D005189 1.5e-106 390.2 321 58.6
Pp3c3_10070 Physcomitrium patens HOM05D004085 ORTHO05D005189 5.8e-106 388.3 320 60.3
Eucgr.K02549 Eucalyptus grandis HOM05D004085 ORTHO05D005189 1.1e-104 384.0 317 58.7
COL.COLO4_27802 Corchorus olitorius HOM05D004085 ORTHO05D005189 2.1e-103 379.8 321 60.1
Oeu045347.1 Olea europaea HOM05D004085 ORTHO05D005189 7.8e-103 377.9 242 74.4
Nn3g17533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 2.1e-100 369.8 292 62.3
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 4.7e-100 368.6 306 62.4
CBR_g34346 Chara braunii HOM05D004085 ORTHO05D005189 3.1e-91 339.3 353 47.0
BraA02t08382Z Brassica rapa HOM05D004085 ORTHO05D005189 9.0e-91 337.8 227 70.9
FvH4_4g29300 Fragaria vesca HOM05D004085 ORTHO05D005189 6.0e-79 298.5 199 70.9
PGSC0003DMG401004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.9e-77 293.5 180 76.7
arahy.Tifrunner.gnm1.ann1.A9XC2E Arachis hypogaea HOM05D004085 ORTHO05D005189 2.9e-73 279.6 185 71.9
unitig_22.g6891 Utricularia gibba HOM05D004085 ORTHO05D005189 1.9e-72 276.9 218 59.6
CSS0002590 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 6.3e-68 261.9 304 50.3
Os09g0248000 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 3.8e-65 252.7 165 72.7
C07p34190 Brassica napus HOM05D004085 ORTHO05D005189 1.1e-61 241.1 185 63.2
Oeu045348.1 Olea europaea HOM05D004085 ORTHO05D005189 1.1e-61 241.1 144 78.5
Solyc04g005300.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 3.1e-59 233.0 140 73.6
TPR.G27985 Trifolium pratense HOM05D004085 ORTHO05D005189 1.9e-56 223.8 151 69.5
MBI10_g36395_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 2.9e-49 199.9 147 63.3
Peaxi162Scf00098g00096 Petunia axillaris HOM05D004085 ORTHO05D005189 2.9e-41 173.3 125 65.6
SEGI_05680 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 2.3e-38 163.7 111 70.3
HPP92_003722 Vanilla planifolia HOM05D004085 ORTHO05D005189 1.3e-36 157.9 126 62.7
BolC7t43946H Brassica oleracea HOM05D004085 ORTHO05D005189 2.4e-35 153.7 96 70.8
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 1.6e-31 141.0 91 72.5
MD05G1127700 Malus domestica HOM05D004085 ORTHO05D005189 3.0e-30 136.7 92 68.5
BolC7t43934H Brassica oleracea HOM05D004085 ORTHO05D005189 3.1e-27 126.7 105 59.0
Lj5A720T31 Lonicera japonica HOM05D004085 ORTHO05D026373 2.7e-26 123.6 169 43.8
Thecc.03G108100 Theobroma cacao HOM05D004085 ORTHO05D026373 2.7e-26 123.6 90 63.3
TPR.G40588 Trifolium pratense HOM05D004085 ORTHO05D005189 3.5e-26 123.2 69 76.8
Lj3C737G8 Lonicera japonica HOM05D004085 ORTHO05D005189 7.7e-26 122.1 75 73.3
Duzib068G1264 Durio zibethinus HOM05D004085 ORTHO05D005189 2.3e-25 120.6 67 80.6
Actinidia04797 Actinidia chinensis HOM05D004085 ORTHO05D026373 6.1e-23 112.5 74 70.3
SEGI_34269 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 3.5e-18 96.7 57 71.9
BcaC06g31148 Brassica carinata HOM05D004085 ORTHO05D005189 1.2e-15 88.2 72 56.9
Ciclev10024148m.g Citrus clementina HOM05D004085 ORTHO05D043374 5.4e-11 72.8 43 74.4
CANSAT64G2585 Cannabis sativa HOM05D004085 ORTHO05D043374 5.9e-10 69.3 55 58.2
Eucgr.B03119 Eucalyptus grandis HOM05D004085 ORTHO05D195170 3.3e-08 63.5 56 57.1
PGR102G2199 Punica granatum HOM05D004085 ORTHO05D000487 2.3e-06 57.4 54 51.9


User provided reference genes

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