Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 3.9e-58 228.4 161 100.0
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 4.6e-43 178.3 158 84.8
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 7.9e-43 177.6 158 86.1
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 5.1e-42 174.9 158 84.8
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.1e-41 173.7 158 83.5
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 2.5e-41 172.6 158 83.5
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 5.6e-41 171.4 158 82.9
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 4.8e-40 168.3 158 80.4
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 7.6e-38 161.0 161 78.9
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 1.7e-37 159.8 161 78.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 2.9e-37 159.1 158 75.9
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 8.4e-37 157.5 160 81.2
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 1.4e-36 156.8 158 75.9
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 4.2e-36 155.2 159 79.2
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 7.1e-36 154.5 160 80.6
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 9.3e-36 154.1 158 79.7
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.6e-35 153.3 160 80.0
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 2.1e-35 152.9 160 80.6
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 3.5e-35 152.1 161 78.9
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 3.5e-35 152.1 158 77.2
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 3.5e-35 152.1 160 80.6
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 6.0e-35 151.4 158 77.2
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 7.9e-35 151.0 161 74.5
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.0e-34 150.6 161 78.3
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 1.0e-34 150.6 160 79.4
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 1.0e-34 150.6 161 75.8
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.3e-34 150.2 158 74.1
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 1.8e-34 149.8 158 75.9
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 3.0e-34 149.1 149 81.9
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 8.7e-34 147.5 159 79.2
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.1e-33 147.1 160 78.8
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 1.9e-33 146.4 160 74.4
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 2.5e-33 146.0 158 78.5
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 4.3e-33 145.2 143 76.9
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 5.7e-33 144.8 161 77.0
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 5.7e-33 144.8 161 73.3
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 9.7e-33 144.1 160 77.5
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 9.7e-33 144.1 160 77.5
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 9.7e-33 144.1 161 77.0
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.4e-31 140.2 136 82.4
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.4e-31 140.2 136 82.4
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 2.4e-31 139.4 161 72.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.2e-30 137.1 161 75.2
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.0e-29 134.0 158 72.2
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 6.5e-29 131.3 160 75.0
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 6.5e-29 131.3 158 72.8
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 1.9e-28 129.8 161 73.9
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 4.2e-28 128.6 158 70.9
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.2e-27 127.1 157 73.2
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 1.6e-27 126.7 161 72.0
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 2.7e-27 125.9 143 74.8
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 3.6e-27 125.6 161 70.2
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 1.3e-26 123.6 162 69.8
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 1.3e-26 123.6 161 68.3
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.8e-26 123.2 160 68.1
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.8e-26 123.2 178 65.7
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 3.0e-26 122.5 157 72.6
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.9e-25 119.8 161 68.3
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 5.7e-25 118.2 161 70.2
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.7e-24 116.7 124 80.6
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 2.8e-24 115.9 144 71.5
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 3.7e-24 115.5 158 67.7
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 3.7e-24 115.5 162 71.0
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 8.2e-24 114.4 158 69.0
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 8.2e-24 114.4 151 70.9
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 3.1e-23 112.5 158 70.3
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 4.1e-23 112.1 158 66.5
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 4.1e-23 112.1 158 66.5
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 9.1e-23 110.9 158 69.0
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 2.0e-22 109.8 158 68.4
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 2.0e-22 109.8 160 67.5
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 3.4e-22 109.0 158 65.2
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 3.4e-22 109.0 158 64.6
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 3.4e-22 109.0 160 64.4
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 5.9e-22 108.2 158 68.4
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 1.0e-21 107.5 117 82.9
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.0e-21 107.5 117 82.9
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.0e-21 107.5 156 42.9
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 1.3e-21 107.1 158 66.5
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 2.9e-21 105.9 158 65.8
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 3.8e-21 105.5 158 65.8
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 3.8e-21 105.5 158 65.8
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 6.5e-21 104.8 158 65.8
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 6.5e-21 104.8 126 77.8
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.1e-20 104.0 127 76.4
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.5e-20 102.8 151 67.5
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 5.5e-20 101.7 64 79.7
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 7.2e-20 101.3 148 64.9
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 1.2e-19 100.5 87 82.8
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 1.2e-19 100.5 158 63.3
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 2.1e-19 99.8 89 77.5
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 4.7e-19 98.6 154 62.3
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 6.1e-19 98.2 158 62.7
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 6.1e-19 98.2 64 73.4
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 6.1e-19 98.2 118 80.5
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.0e-18 97.4 161 61.5
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.0e-18 97.4 121 74.4
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 1.4e-18 97.1 154 62.3
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 3.0e-18 95.9 158 60.1
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 4.4e-17 92.0 120 75.0
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 4.4e-17 92.0 158 59.5
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 5.7e-17 91.7 146 63.0
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 7.4e-17 91.3 158 62.7
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 8.2e-16 87.8 150 63.3
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 3.4e-14 82.4 142 64.1
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 3.4e-14 82.4 148 63.5
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 5.5e-12 75.1 109 53.2
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 5.5e-12 75.1 148 55.4
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 2.2e-08 63.2 116 65.5


User provided reference genes

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